G108981


Basic Information

Item Value
gene id G108981
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22837685 ~ 22838122 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU161043
ttattttattattatttatttttagacatttattgttgctttaaaacaatgaatCGCGATTAActgtatgcataataatataGCGCTTTAACAGCACAGATCGCATCAAAACACTTCAGAAGAGAGTCATAGTAATGTGTAATGACGAGAGATTCAACgcctactttttttattaaatgcagagacggtctttGTAATCAAAATGAAGCGTCCCCAGCTAAACAAGCCGGAGGTGCCGGTGGCAATCCGTGTCTGAATGGAGAAAAAagcttaataaaatcatttttagtttgATGTCGACGTTGTTGTCACCTGATCGTATTCAATTCCAACGTCACAAACGTGCAATGCCTTAAAAGTGGACTTCTCTGGCTAAACGTGTTTATATGTgtagaaacataaaaaatgcatagactctaaattaaataaatggctAAA
>TU161044
CGATTAActgtatgcataataatataGCGCTTTAACAGCACAGATCGCATCAAAACACTTCAGAAGAGAGTCATAGTAATGTGTAATGACGAGAGATTCAACgcctactttttttattaaatgcagagacggtctttGTAATCAAAATGAAGCGTCCCCAGCTAAACAAGCCGGAGGTGCCGGTGGCAATCCGTGTCTGAATGGAGAAAAAagcttaataaaatcatttttagtttgATGTCGACGTTGTTGTCACCTGATCGTATTCAATTCCAACGTCACAAACGTGCAATGCCTTAAAAGTGGACTTCTCTGGCTAAACGTGTTTATATGTgtagaaacataaaaaatgcatagactctaaattaaataaatggctAAA
>TU161045
TAATGTGTAATGACGAGAGATTCAACgcctactttttttattaaatgcagagacggtctttGTAATCAAAATGAAGCGTCCCCAGCTAAACAAGCCGGAGGTGCCGGTGGCAATCCGTGTCTGAATGGAGAAAAAagcttaataaaatcatttttagtttgATGTCGACGTTGTTGTCACCTGATCGTATTCAATTCCAACGTCACAAACGTGCAATGCCTTAAAAGTGGACTTCTCTGGCTAAACGTGTTTATATGTgtagaaacataaaaaatgcatagactctaaattaaataaatggctAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161043 True 438 lncRNA 0.34 1 22837685 22838122
TU161044 False 382 lncRNA 0.37 1 22837741 22838122
TU161045 False 306 lncRNA 0.37 1 22837817 22838122

Neighbor

gene id symbol gene type direction distance location
LOC122359067 NA coding upstream 166 22835659 ~ 22837519 (+)
LOC122358711 NA coding upstream 2898 22824063 ~ 22834787 (+)
LOC122359066 NA coding upstream 7756 22827350 ~ 22829929 (+)
lrrc51 LOC107706076,LOC107558849,LOC107670099,LOC107669906 coding upstream 24415 22808780 ~ 22813270 (+)
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding upstream 72723 22751534 ~ 22764962 (+)
LOC122358712 NA coding downstream 1069 22839191 ~ 22852649 (+)
LOC122359069 NA coding downstream 6788 22844910 ~ 22847878 (+)
LOC122359065 NA coding downstream 15136 22853258 ~ 22856816 (+)
LOC122358713 NA coding downstream 18355 22856477 ~ 22857439 (+)
cwf19l2 cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834 coding downstream 39730 22877852 ~ 22897674 (+)
G108949 NA non-coding upstream 62112 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 171392 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 189340 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding upstream 208573 22619676 ~ 22629112 (+)
G108740 NA non-coding upstream 273504 22522750 ~ 22564181 (+)
G108986 gria4a non-coding downstream 31453 22869575 ~ 22988641 (+)
G109006 LOC104959606 non-coding downstream 160408 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 202948 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 273434 23111556 ~ 23113058 (+)
G109018 NA non-coding downstream 278707 23116829 ~ 23117749 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 59960 22775649 ~ 22777725 (+)
G108573 NA other upstream 1099998 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1101967 21735014 ~ 21735718 (+)
G108571 NA other upstream 1104578 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1111419 21724404 ~ 21726266 (+)
G108990 NA other downstream 111018 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 117589 22955711 ~ 22959679 (+)
G109132 NA other downstream 408653 23246775 ~ 23271291 (+)
G109193 NA other downstream 671310 23509432 ~ 23510315 (+)

Expression


Co-expression Network