XLOC_006692 (zcchc24)


Basic Information

Item Value
gene id XLOC_006692
gene name zcchc24
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30579260 ~ 30645965 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012894
GGCCGAGGACAGCGAGCTAAAACTTTTTATTCTGACATGTCAGAGCAATGACTTTTGTGTAAATATAACCCTGGGACACGGATCCCAGCGAGGGAATAGGGTCTGTGCTGGAAGAAGAGAGAGAAGCGCTGATTTTTTTCGGGGTGTGGAAAACCGGACGGCGCATTCACAGTAGACTCCCAACAAGTTTGTCTTTTCCAAAAAAGTAACAGTGGAAGAGTAAAAGTTACAGTAACAACATGAGCTTGTTGTCTGCTATAGACACCAGTACCTCAGTGTACCAGCCTGCACAGCTTCTCAACTGGGTTTACCTTTCTTTACAAGACACGCATCAGACGAGTGCCTTCGATGCCTTCCGACCCGAGCCCAACTCTTCCCATCCGGACCTGAACTACAGCAAAACTCCTGCCAATGACCTGAGCTCCTCTCTCAACTCCAACTATCTCAACAACTTCTTTCAGCTTCAGAGGAACGAGGCTCTGAATAATGGTTTATACAAAAGCGTGTCCCCGTATGGCTCTCTTAACAACATAGTGGATGGGCTGAACTCTCTAACAGACCACTTCTCTGACCTCTCGCTTTCCTCTGAGCCGCGCAAACCCAGCAAGAGACCTCCACCAAACTACCTGTGCCATCTCTGCTTCAACAAGGGACACTATATCAAAGACTGCCCGCAGGCAAGGCCTAAAGGCGAAGGACTGACTCCATACCAAGGCAAGAAAAGGTGCTTTGGTGAATACAAGTGCCCAAAGTGCAAAAGGAAGTGGATGAGTGGAAACTCTTGGGCCAACATGGGACAGGAATGCATCAAATGCCATATCAATGTTTATCCTCATAAACAGCGTCCTTTAGAGAAACCCGACGGCCTGGACGTTTCCGACCAGAGCAAGGAGCATCCGCAGCATCTGTGTGAGAAGTGCAAAGTCCTGGGCTACTACTGCCGCCGCGTGCAATAAAGAGGATCCCGAGGTCGTCTATCCCCCTTTCCCATCGCTTCGCCTACCAAGCACTCCAAGATAAAGTGAAAAGTGCCAAAATATTCATGTAAATATCTCTAACGCTAGTAATGGCTTTGTGTATCAGCCGCATGCGAGCATTTATTGTGTATAATGGACATGTTTGGGACAGTATTTCTATCCGTACGGGACGCAGTGGATTACCTCACCATTGCGTCCCCTGGTTGTGTGTTTACAGACTCCCTTCATTCTCCCTGCCAAGTGAACTATGAGGATGTGCCGAGTGCTAAAGGTGTCATGTTAGGTTGCTCATACAAAGTGTGCCTTTGAAGAGTTTTTTTTGGGTCAATAGCACATCATATTAACTGTGAATTAACAGAGGGATAATGGACTTTCCATCCCTGGCTTTTGtgtcacatatttatttatgtttgtatatcGTTTTTTGTAGTGcaattgaatgaactaaactgGGATTATTTCATCTGGACAGGAATTGTCTGACCCCACCTCTTGCCATTAAAAACTACTGTAGAATAGAACTTGCTAATGCTTCGGTTTAGCGCATCAGGTAGTTTGTGTCTTTCACATACACATAGAAATTGCCAAACACAAGATTCTTTTTGTGTGATGTTGGCTCAATGCAGTCACACAGAGGATTTGAATCAAGCTGTTTGGCATCTATGCAAAACCATTGCAGATTATGCAGTTTCTTTTGTTGTCGCATGAAGTGTATGGATGAACGAAACAAAGCCATGACTAGCTGATCGTCACCGTCCTTTGAAATGTGATCACGCATGTTGCCGGAGAACTGCTTCAAACGTCTTAGAAACCCAGGTTAAGCTGAAGTATTTTGGTACAAGGGTCAAAATGTGAGCTTTTCGGTCCGTGTGCTAGCATATAATAACATAGCCTGTTTTTCACTGAGATATTCGCCTCAGGATATAGAGTGTGTTTATAGGCACATCTTAGATGAAATGGTCTACATGTGTCTTAAATGAACACTGCTCAAGAAAATGTCAAATAGTTAATTCGCTattatgtaaacatttatttttaaattcaaaattcacTCTTAAAAATATAAGGTTTTCCAAAACAACCTTACAGTGAAAAAAAGCAACACTCCACTTTTAAAAAAGGGAACTTTACGCAATGATATTACGCATCGCTTGAAAATACTTCTGAATCATCTCGCACAAATGTCCCCATGGTTGTAAGGCACACTCCCTGTGCAAGCAGACTGTCATGTTGGTTATACTGACGCAAACTAGGCGATTTTCAAGTGTTACGCAATGTCATCAAGTTTCATGATTATGATGAAGAAAGGAGTGTAGAGTCATatcgacctagaaaatagcaacttttcattttacgTCAGCCACGATTTTGTCATCGGAGataaatttgggaaatcctaaaaaaTTCCTGAAATCCTAGACTGAAATCGGTGATCTTTGatcattggtttgacatgttcactgacaaACACTTAATGCCTATTGCCATCAGATTTTTCCTgtgatgaagttctggcagtgtcagaagatttcagacactttcctgcagtgtgacaacaacTGCGATGATTGTCAATCCAAGAATTAATAGGAGCTCCGTATTTGATGATGCGATCCATGCAACAATTCAAATGACCGAGGGGAAAtgacaaaacagttttttttcttgttatgttATTGAGACTCGCCGAGTGCAAATTtgccgctacagattgtttacatttgctgtgaggaatcatttcagagtgcgggatagtgaaagtgtcacgggTGGATGATGTCCAACTCCGTGGGTGTTTTCTTTGGTGTTTGATGCGTCTTCATTGTCGctcagtctgactttatgacatGAGATCTTACAGTGTAACATGGAAGATATGttcatgcagtctgacatgctacaatcattcaggattataaaataaaaaataaatataaaataaaaattgcatcgTGTGAGCCGGCCTTTACTgcatgtaactacagaagaaccAATCATAAAATAGGAAAATAATCGaaactcttttgtcatttttgagtgagaggCTAATGGCCTAATCCAATCCAATTCAtcggtttatgctaagctaagctaagctaaaagtgctccctccAGACCTGGGGATTggctaaaatatgtaaaaaacggtaaaactcaactgtttaactcgaGGAGAgatgtaaaatgaaaaataagtGGAGTGTTCATCTCAAAAATCTTTATagtaatttaaaaatgtcatttatgtaAAGTGCTGTTTGTAGATGCCAACAAATAACCTTAATTTCAGAGTTTTGAGCTTGACCCTTGCActaaattaagttttattaaagAGATTTTCCAGTGTTTACACAATTATTCTGATCTTATTTCAGTATGAAATCCTTAATGTTTATTGTCTAACCCCCGTATACGTATGCTTAAGCATAACATGCATAACTGATGAATTCCACCCTGTTTATACTGTGATTTTTGGGAAGTGTTTTCTATCCGAGTGGACAAATATATTGTTGTAAAGGGAAAAGAAGGACAAAGTAAGTAATCCTGAAGAGATTTTGAGAAGTAATAAAACAACACTTTGGGTAcatgtgattggtcagaagataTTTCGGCTTGACAGAATTATGACAGAAGCATGTTAATATTGGATGGAAGTATGTGTGCGCAGGATCTCATATAAATATATGTGCCGTTACCTCTCACTATGGCTCACACACAGTACTAACTGATCGTATTTGAGTGTGACCCAGAACTATTGAACAATAAATGTAGCTTTACGTGTTCCAGCGGGAAGTTGTCGGTGGATTTTGTGAGAATTGAGGTTGCTTTGTTAATCCTAGATGTACATATGAAGTTACATGCATTTATACAATGTGTATAATTGTTTACTTATCTTTGGAGTCCACATATTTTGTGTCAAATTTTAGTTCATGTTTCATTTATTGGGATAAACTTTGATATCTTGATTGAAGGGAACGCCTTGTGCCTTAACTCGGTTTGTTCATGAGATGATCGAGGAGATGTTGTGTATGATCACGTATGAGGCATAAAAAAAAGCCGGTTAGAtgcctaaaaatgtaaataagcgAATTCTGCTTAactgaacatttttatttcattatgggAAATTCAAGCAGTACAAACTGCCAGGGAGTCAATCATTAGATCacagttaaattaaaaacaaagctgTTTCTGTAAGTCGCTACTTTGTTCATTGGACGTCGTCATTGTTTCTGAGAGCCTTTATTTCTTGGTAACTGTGTTTTTGCTAACGGTGTTGCTAATGGCTTCACTCTGCGTACATTCTTACACGCCAAGGTTTACTTCAGGCCTCATTTAGGCTGGAATGAGTTACTCTGCTTTCTGATAAACACAATAATGAATGGCGTAATGAAAATAACCAGCAAAATAAGTGATTCCTGCGCATTCACCTTGACGTTTATAGCTGGTAGTCTGCACGTTAGGATTTCCTTGCATCTTTGGGATCAATTTAAACTCAAACGACCGAACGCACCACTAGATAAAGGCCTCGATTTGCTTTCCTAAAGCAAAATTGTTGCATTGCACTATTGTAAAATGACCCAGAGTTTTGTAAATGTTGAAGTTAGAATTGCGCATTTGAGCTTCCCCTGATTTCTGTCCTATCAAATGGAAGACAGAGCTTGTGGTGTTGAAAGTGTACATGCATTTAAAACTATAGAAAGTGCTTTTCGCGCATGTGATTTTGTCTTGAAATACATATACTTGACTTTTATAGCTCACTTTCAATATAAACGTGTTATTTTCTATTAAAGGTATGTGTATTTTGGAAACAATATAATGATTTTGGAGCAATTTTATATCCAGAAGAGATTTTTTGTCGCTTTTTGTTTTCCATTACAAAGATACTAGTATGTGTTTTGTGTATATATTCGATCGCCATTATTATCAATTTAGTTATTTCAAAATTGTTATGATGCAATATTAAAACTTTGTATGTGAAAAAGGGCAACTTGCTGAGATGCAAAAGAGCTgggagtttttttctttcttcgaTATATCTTCGGTTATATCCTACAGAAATATTTATGGAaggattttgttcttttttttaacaattcaattcttttttgtataaaatatgCAACAGAAGCTACTCTATGAAGAAAATATTGATGATTACATAGAATATTATTCAAAGGTTGGTACATAATTATTATGCCCTTACAAGccatttttatgtgtgtgttttagtatATAGTTGCCTTAGTTATGAGCATATGTGTGCTTTGATTCATTGTGTGTCTGTTATACAGCATGAATGTTGTGATTTGCATTTATAGGAAATCTTTAACGCTCGTTCTAACATCACAAACAGCTGTTTTTCATATAAAAGACTGACTCACACACTGTAAGTCACAGGGCCTTTTTACTGAGGTGTTTTATACAGTGGCAAAAAGACGTGACTAACTCCAGTCATTGACCATAACACTGTATTGCACGTACAAACGTTTTACATGGTTGAAATGTGTTAGTGAATCAGGCCCATACTGTATGAAACTGTGAGCCATCTCCAGTTACTGCCAAGTCCAGGAATGATGTCGAAATGTTTTTCTTCGTATGTAAAAAAATGGAAAGAAATCCAAGActatttttcaaaacaagtgtGTGGGACTGAAGTTTGCATGtgcatgttttatttgtttaaatgaatCAAGAAATATAATTTGTGCAATGTattcttatttaatattaatacgtTTAATTCTTGCTAAGGTATCTTTTGTAGATTACACTTCTAGATGTTAGTCATTAATAATGCCTCCGTTCACTCCTAGGATTTCCAGTACCATTAATAGATTTACTGAATGTACTGATTTAACACTCATTTTTGTAATGTCTGTAAAATATTTGTCGTCATATTGGAGTGGACAGAGCAACAGAAAGCCTTGATGAAGGAATGTACCAGAATGTAAGATGAGATGAAATCTGTTGCTCGATGTCCATGAAACGGCATTCCGATATGTGCCTTATTTGTTAGTTAGAAAAACTGAAGACTGTGCTTTTAGAAGTTTGTTCAATTAAAACATGACTAAAAGAAA
>TCONS_00012896
GTGTAAATATAACCCTGGGACACGGATCCCAGCGAGGGAATAGGGTCTGTGCTGGAAGAAGAGAGAGAAGCGCTGATTTTTTTCGGGGTGTGGAAAACCGGACGGCGCATTCACAGTAGACTCCCAACAAGTTTGTCTTTTCCAAAAAAGTAACAGTGGAAGAGTAAAAGTTACAGTAACAACATGAGCTTGTTGTCTGCTATAGACACCAGTACCTCAGTGTACCAGCCTGCACAGCTTCTCAACTGGGTTTACCTTTCTTTACAAGACACGCATCAGACGAGTGCCTTCGATGCCTTCCGACCCGAGCCCAACTCTTCCCATCCGGACCTGAACTACAGCAAAACTCCTGCCAATGACCTGAGCTCCTCTCTCAACTCCAACTATCTCAACAACTTCTTTCAGCTTCAGAGGAACGAGGCTCTGAATAATGGTTTATACAAAAGCGTGTCCCCGTATGGCTCTCTTAACAACATAGTGGATGGGCTGAACTCTCTAACAGACCACTTCTCTGACCTCTCGCTTTCCTCTGAGCCGCGCAAACCCAGCAAGAGACCTCCACCAAACTACCTGTGCCATCTCTGCTTCAACAAGGGACACTATATCAAAGACTGCCCGCAGGTAAGCAGACAGCGATCTCTGTACACCTTGGGGAGATGGAAAAAGAGACGTCGCCTCATTGACCTACTTGTCAAACAGGCATCGCTCTGTCTTTTCAGTCATGTGCATCAAGTTAATTCAGAGAGCCGCCGTGCTGAGCATTGAGAGGTAATGCAAGGCCACTGAGCAGTCTTTCTTTAAAACATGAAAAtcatcagattattattattatattttttttcgcTAAGATTATTTGGCCTCTGATGGTGACATCAGATGGTAATAACAAAGCAATAACATCAAGGATATCACACATAAAATGTTTTGAGCAGGAAATGAAGCACAAAGTCATTTTCAGAAATAGT

Function

symbol description
zcchc24 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZCCHC24 (zinc finger CCHC-type containing 24).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3573 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZCCHC24 (zinc finger CCHC-type containing 24).

Ensembl:

ensembl_id ENSDARG00000078026

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012894 False 6061 mRNA 0.38 4 30579260 30645965
TCONS_00012896 True 965 lncRNA 0.45 2 30639545 30645909

Neighbor

gene id symbol gene type direction distance location
XLOC_006691 NA coding downstream 8117 30568567 ~ 30571143 (-)
XLOC_006690 NA coding downstream 27751 30549409 ~ 30551509 (-)
XLOC_006689 NA coding downstream 328696 30245673 ~ 30250564 (-)
XLOC_006688 ppa1b coding downstream 417576 30152217 ~ 30161684 (-)
XLOC_006687 sar1ab coding downstream 428668 30144937 ~ 30150592 (-)
XLOC_006694 si:dkey-275b16.2 coding upstream 9207 30655172 ~ 30662403 (-)
XLOC_006695 rassf4a coding upstream 18854 30664819 ~ 30700460 (-)
XLOC_006696 CT025887.2 coding upstream 38221 30684186 ~ 30685913 (-)
XLOC_006697 tmem72 coding upstream 58396 30704361 ~ 30713236 (-)
XLOC_006698 NA coding upstream 162998 30808963 ~ 30812183 (-)
XLOC_006471 BX537274.2 misc downstream 20314355 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 29753035 825904 ~ 826225 (-)
XLOC_006682 NA non-coding downstream 593758 29984877 ~ 29985502 (-)
XLOC_006680 NA non-coding downstream 636298 29937395 ~ 29942962 (-)
XLOC_006699 CR762493.2 non-coding upstream 209354 30855319 ~ 30872439 (-)
XLOC_006703 BX005005.3 non-coding upstream 396549 31042514 ~ 31051156 (-)
XLOC_006704 BX005005.2 non-coding upstream 406571 31052536 ~ 31061816 (-)
XLOC_006705 BX005005.1 non-coding upstream 429868 31075833 ~ 31075947 (-)

Expression


Co-expression Network