fhdc4 (LOC107752494,LOC107704784,LOC107682937,LOC107559008,LOC107587915)


Basic Information

Item Value
gene id fhdc4
gene name LOC107752494,LOC107704784,LOC107682937,LOC107559008,LOC107587915
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 17778597 ~ 17787869 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258150.1
CAGCCTCGCAGTGAGCAGCACTCCCGCGTGACGGACGGAGCGTGCTTTTCTCGCCTGAACTATATAGCCAAAGTACATTcagaaattttcattttggggacGCCTGGATACCTCACAAACGAGGATGATGCAGCATAACCTTTGCAAGTGACATTTAAATCATGATACCACCGCCGCCGCCACCgccaccaccaccacctcctaATGCCCCacctccccctcctcctccacccCCTGCCCTCTTCTCTGGTGGAGGCCCATTTGCCAGAGGCCCAATGCGGGCCTCTAAAATGCGTAATTTCAATTGGGAAGCCATACCTAAGGACACAGTGCTTGGCAAGCATAACATATGGACGGCTGAGAAGAACAGTGAGTTTGAGTTGGACACCAAACGCATGGAGGAGTTATTCAGCCGCAATGATCAGAAGCAGGTCCAGGCCACAAACCGCCGCAGTGTGCGCCAGTCCCCGAGCAATGCTTCAGGTCCCGAAATGGTAACCATCCTCAACTCCAAGAAGAACATGAATATCGGTATCTTTCTCAAGCAGTTTAAAAGGTCAGTGAGTGGAATGATTGAGGACATTATCAACGGTAGAGGAGAACGATTTGGTACAGGGAAACTGAAGGAGTTGTGCAAACTACTGCCAGAGGATGGAGAGGTACGTCAGCTTCTTGATTTTAAAGGGGACTGTTCGGCTCTCTCTGAGGCAGATCGGTTCATGGTACAACTTGTCAAAGTTCCTTGCTATGAGGAACGGCTGAACAGTTTAGTACTCAAAGAGGAATTCCCTCATTTTATGGATGAAGTGAATCACTCTATTGCAGTTATGACCTCTGCTGGACAAGAGCTGCTGGAATGTGCCGATCTACATTCAGTCATTCATCTGGTCTTGAAGACAGGAAACTACATGAACTCTGGAGGCTACGCTGGCAGCGCGGTGGGATTCCGCATAACGTCTCTTCTCAAACTAGCAGATACCAAAGCCAACAAGCCTGGAATGAACCTCATGCACTATGTTGCAATGCAAGCCCAAAAGATTGATGCATCGCTGTTGAAGTTCCCAGAAAAGCTACAGCACATCGGAGATGCAGCAAGGATCCATAAGCAGGAAATTGAGTCTGATTTCCAAAAGGAAATGAATAGAGTCCAGGTGGTGAAGCAGAATGCTAGTAAACAACCAGATCTGGAAGAACAGATGAATGATTTTCTGCAGaaCGCAGACACCAGGTTAAAGGACACCGAGACGGCTTTCAAAAACCTTTCTGCCGTGAGTGATTCAGTAGCGGGGTATTTCTGTGAGGATCCAACTCAGTTCAAACTAGAAGAATGTTGCTCCATTTTCTACTCTTTCTGTGAGAAGTTCAAACGAGCCGTTCAGGAGAATCTTGAACGAGAAATGGTGGAGGTGAAACGCAGACAGCGAGACCGTAATCAAATAGCAGCCAAGCGCCGTTCCACCGCCACCTGCTCCTCACGGGACAAAGACATTGAAGGGGCTGCTCTTGAGTCCATCCTACAGAGATTCAACAGTCGCCAATCCCGCCGTAGAGCCGGGACCAATTCCACCTCACGGGGGGATCTTACTGAGACCACCACGCCAGAGAAACTCCCGGCCGACAACAGAGAGGTCAAGAGAGACAGCTGGATCAAAAGTGCCATTCAGTCCTCTTTGATCAAGGAGAGCGTTGATAAAGACGAGACACCCATGTACCCAGAGATTACAATCTCAAGCCCAGCGCAGAACAATATGGATTCCTCGATCAATCAACGTGTCTCTGTATTCACGGTGCAGGAGGAGGAAGATGTGCAGACAGAGATAGAAGTGCAAAATATGAGAGAGGTGTCGCGGAAAGTTTTGCAATACCAGTCCAGTAGGAGTAGCGTTTCATCTGGCGAGGCCCTGTCACCCATCCTGTCTCCCAGGCAGACGTTCTTCCAGGAAGACAGAAGACTGCTGATCGTGACCATAGAAGAAAACACCTCGAAATCCAGCTCTCTGCTGCAGAACGGCCAGATCATCAATCGCAGGCACACGATCTCACTTCCCGAGAGCAGTTGTGGAAACGCCAGCCAAGAGGATCTATTTGTGCCCGGTGATCTAAACGCGTCTCCGGCTCCCTCTATAGGTGTTATCGGAAAAGGGAAATCGGTGGATTGCGGTATGATTGCCACACTGCAAAACTCTACAGAGACTGCTAAAGACTCAGAAACCAAGCCGCTTGATTCTGAAGAGGAATCGCAATCTGTTGACTCATCGCGGTCACAATCGGTCGAGCCGGAGACAAAGGCTGAAGAGACGATGCCTAGCTTGCAGTTTAGTACCACGAAGAGAAATAGCCAAACTATATCGTTCAAAAGCACAAAAGAGGGCTTCAGCCTCATGTCTTTATTTAAGCGTTGGCGTGAAAAAGACAAATCAAAAGAGCTTGATTCTGACAGCGTAGACCCCTGATCTTAATGAAACCTTTTCTATTTATTCAGGCATTTATGCTAGTTGTCGCGCGGCGTTTACTGAAAACGAGCTTGGTGCTTTGTCACTGTTACTTGCTGAAACGTGTCTAATataaaaggagaaaaaacaATGCACATGCAATTACACAGCATCTGATAAACAGTGTTGAGTTCAGTAGAAAACGAGACATTTTTTACCTGCAGTGTGCTTTCTTCAACACAAGGGAGcagtatattactttttttatgatgataCTGTATCTGTATCTGCAAAAAAATGAACCATTCATGCCAAGAATAAGAGTAATTATCCTtgtttcatattatataaaaagcaatcaaaatagCTGGTAAACCTAGTTGTTATTCGCTGAATAAATCCACaaattgtaacaaaatattttttccttggATGTTCTTATTGAGTAAACAGTTAGATgaagaatttaattttt

Function

NR:

description
PREDICTED: FH2 domain-containing protein 1-like

GO: NA

KEGG:

id description
K23958 INF2; inverted formin-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258150.1 True 2907 mRNA 0.46 12 17778597 17787869

Neighbor

gene id symbol gene type direction distance location
arfip2a arfip2a,LOC107587234,LOC107704786,LOC107559011,LOC107752500,LOC107682914 coding upstream 1044 17769204 ~ 17777553 (+)
dchs1a dchs1a,LOC107587256,LOC107558986,LOC107683408,LOC108433795,LOC108278281,LOC107704701 coding upstream 28230 17660921 ~ 17750367 (+)
brca2 brca2,LOC107752535 coding upstream 142773 17623734 ~ 17635824 (+)
frya fry,frya,LOC107559014 coding upstream 155543 17572425 ~ 17623054 (+)
rxfp2b rxfp2,rxfp2b,LOC107558987,LOC107683406 coding upstream 212526 17549776 ~ 17566071 (+)
LOC122358680 frem2b,LOC107752721,LOC107683412,LOC107730863,LOC107704782,LOC107582282,LOC108433801 coding downstream 249244 18037113 ~ 18039299 (+)
trpc4b trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445,LOC108433784 coding downstream 433403 18221272 ~ 18237305 (+)
postnb LOC107704781,LOC107752481,LOC107587216,LOC107730854,LOC107582252,LOC107682985 coding downstream 452780 18240649 ~ 18254051 (+)
spartb spg20,LOC107752446,LOC107683015,LOC107730857 coding downstream 482167 18270036 ~ 18283210 (+)
dclk1b LOC107752421,LOC107704780,LOC108433804,LOC107683036,LOC107730822,LOC107582281 coding downstream 497090 18284959 ~ 18317179 (+)
G107477 NA non-coding upstream 211721 17566193 ~ 17566876 (+)
G107468 NA non-coding upstream 298549 17479848 ~ 17480048 (+)
G107450 LOC108433790 non-coding upstream 320911 17454294 ~ 17457686 (+)
G107447 NA non-coding upstream 463936 17309345 ~ 17314661 (+)
G107443 NA non-coding upstream 577660 17200408 ~ 17200937 (+)
G107547 NA non-coding downstream 28263 17816132 ~ 17816825 (+)
LOC122358482 NA non-coding downstream 70038 17857907 ~ 17859804 (+)
LOC122358481 LOC107575069,LOC107748074,LOC107682967 non-coding downstream 266399 18054268 ~ 18072232 (+)
LOC122358786 NA non-coding downstream 654826 18442695 ~ 18443413 (+)
G107688 NA non-coding downstream 737736 18525605 ~ 18526233 (+)
lyrm9 lyrm9,LOC107756492 other upstream 1264376 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 1542256 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 1735332 16004869 ~ 16043265 (+)
G107107 NA other upstream 1895087 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 2066158 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 1976 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 44203 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 257148 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 968474 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 971713 18759582 ~ 18760497 (+)

Expression


Co-expression Network