lrrc51 (LOC107706076,LOC107558849,LOC107670099,LOC107669906)


Basic Information

Item Value
gene id lrrc51
gene name LOC107706076,LOC107558849,LOC107670099,LOC107669906
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22808780 ~ 22813270 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258175.1
CCGAACTGCTGTGACCCAAAAGTTGCTATGATTAAAGAACGCTTTATTTAcagtgatatatatttttttaattattcatttatttaggatttacattttaattgtcattttatgtAAATTCGCTTTTTTTGCTCGTTAGCCTTAATCAAGATTAATCcgtttttgtacttttaaccTTATTGCAATTTGCAgtttttaatcttgttttctgcAGAAGTTGGACCATGTTTGGATCTCCAGTAGATTTTTCATTTAGGGAGCTCAACACGGTTTCAGaCCTGCTCACTGATAAACCTAATCCAGGAGCTCGTCCGCTAAAGCGCGACTCGGAGCAGAAGATCATCGGCACAGCTCTCAGACTAAACAACAACTTTCTCTCAGACTTGACGGGGCTGATGGGCACGCTCTCTTCTCTTTACGCCGAGCCGACGCGTCTGGCCTGGCTCGACCTCTCCTTCAACGAGTTTCAACACATCCACCCAGTCCTCGCTCAACTCAAAGAGCTGCGCTTGTTGTATCTGCACGGGAACCGTATTTGTAAGCTGTCAGAAGTGGATAAGCTTGCCGCGTTGCCGTTTCTCCACACCGTCACTCTCCACGGCAACCCCGTAGTGACCGAGCGCGACTACAGGGCGCATCTGATCGGCACCCTTCCTCACGTGAAGACGATCGATTTCAGCGCCGTCACCAAACAGGAGCGGGAGCTGACTTCAGTTTGGCAGAGGAGCAGAAACCTGCGCAAATCCATCGGTCACAGCAAAGTGGACTGACTTTGCATCTAATAAACGTGGGGTTACAGCTACAGCGAGGTGACTTTAAAAGATAAACTAGACTCCAGAGTTTCTTCATTAGTCGTTTGTGAAGTCACAGGAGCAAGTGGCGACACATCTTAAGCAACAGAAAACCGTCTTTTTGACTAGAAGGCCTTTAAAGCCATGTCACTAAGTTTGAGAATTGCAATTCAAGTCTgctacacataaaaaaaacccccaacaaAACCGCTTTATAATTTTGAAAGTCTTTAATGCATAATTTCattcaacaaaaacagttttaacagAATATcgagaattttttatttttattttttttggtactAGCCTAAGAAATGATTTCTCTGTAAATCAGGTAGTATTCCACATTTaggtaacaaacaaacaaaactcgAACACTATTAGTACACtgcaacagaaaacaaaatatttgcaGCGCATTTCATCCCTTTAAAAACCTCCAAGAAAGGCGGAGGTGCCTTGCCGTGATCTAGAGAGCTAGCTGTGCCACGGCGGTCTGTGAGcttgcataaatacataaaatcaaaataaataattacacaaacatACTGTGTGGCATCTCGGCCTCTGTCGGGGAAACAAGCCGGCTGATTGAATTCACTagctctttcctttttttcggCACAaccgcaaaaaaaaataaacgttgGACTAAGTTAAAgcaatgtaataatatttttcgcTCTGTTAAAAGTGGAACAGGCAAGGTAAAAGCAACCCCGTTTGCTTAGCTAAAAGATCGCAAAGCCTTACGACCGAGGCCTAGCGCGGCCGGGGGGCGCCACAGAGGCGTTCACGCGTCAATCATTCATCTCTAATCATTTTACACTCTGTACATTAAAGGCATTGACACAAAAACGTCATTTACAAACTACGAAGTCCAATTCAAACCCGCCTCCCCATCCGAGACGCCTCTTCAGATGCGACTGCATGACCGTCGGATGCTTACAGGAAAAGTGCACAGTAAGAGAAACACTTTCTCTTCCTTTAAAGACGACAGCAGAGCCGCCTCAGAGGATCCAAAATCTATTCATTCAATTCGTGATGCGGCATGGCGCACACCACCCGGCATAAAAGTTACGCACAGGCCGCTGATCTGTAGAAATAAACGCTTGCGATATAGACCTCGGTGAGAGCAGCGCCGTGTTTAAATTAGATGGGATGAAAACGAGGCTGTGAGGGACTCAAGTACAGTCTGATGAAtggattaatcacatccaaaacaaatcatttggtttacataatgtgttctgtgtgtgtgtctatatatatatatatatagacacacactcacacatgcaggAATATacttcagaaaaatatgttgag

Function

NR:

description
leucine-rich repeat-containing protein 51-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258175.1 True 2123 mRNA 0.43 4 22808780 22813270

Neighbor

gene id symbol gene type direction distance location
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding upstream 43818 22751534 ~ 22764962 (+)
tyr tyr,LOC107670098,LOC107669900 coding upstream 77584 22714506 ~ 22731196 (+)
actn4 actn4,LOC107669904,LOC107570110,LOC106612603 coding upstream 192027 22572491 ~ 22616753 (+)
zgc:85932 NA coding upstream 238989 22547353 ~ 22569791 (+)
dhrs12la flj13639,LOC107725108,LOC107670134,LOC107669913,LOC103025652,LOC108433977,LOC108278219 coding upstream 300997 22499146 ~ 22507783 (+)
LOC122358711 NA coding downstream 10793 22824063 ~ 22834787 (+)
LOC122359066 NA coding downstream 14080 22827350 ~ 22829929 (+)
LOC122359067 NA coding downstream 22389 22835659 ~ 22837519 (+)
LOC122358712 NA coding downstream 25921 22839191 ~ 22852649 (+)
LOC122359069 NA coding downstream 31640 22844910 ~ 22847878 (+)
G108949 NA non-coding upstream 33207 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 142487 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 160435 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding upstream 179668 22619676 ~ 22629112 (+)
G108740 NA non-coding upstream 244599 22522750 ~ 22564181 (+)
G108981 NA non-coding downstream 24415 22837685 ~ 22838122 (+)
G108986 gria4a non-coding downstream 56305 22869575 ~ 22988641 (+)
G109006 LOC104959606 non-coding downstream 185260 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 227800 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 298286 23111556 ~ 23113058 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 31055 22775649 ~ 22777725 (+)
G108573 NA other upstream 1071093 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1073062 21735014 ~ 21735718 (+)
G108571 NA other upstream 1075673 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1082514 21724404 ~ 21726266 (+)
G108990 NA other downstream 135870 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 142441 22955711 ~ 22959679 (+)
G109132 NA other downstream 433505 23246775 ~ 23271291 (+)
G109193 NA other downstream 696162 23509432 ~ 23510315 (+)

Expression


Co-expression Network