G7183


Basic Information

Item Value
gene id G7183
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 11290399 ~ 11291716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU7921
CCGAAAGTCAGACTCAGTCTGCAGATTTTGGGCAATCTGAGTTTACGAGATTTTCTTGCAAAATCTTCATGTATGACGAAAATAGACTCAGAGTTTTGAGCTTCAGACTATGATTCCATCCAGTCACAGCATATCAAACATGTTTGGTAATTTCAGCCAATTTTAAAACACTATAGCTGTGTCCGAAATCTCGTACTGTTGAGCAGGTACTACAGTTGAATTTAAATTTACTTCACGTAAAAGTATGTTCTATATAGTACGAATGCGTGTAGAATGAATGAATTCGGACGTACTATATTTGCCATGTTGTTGCTGTCACATGACCTACCAGCATCAGTTACACCCTTCAACTCTATTCACAAATCCTCTCCCGTGGCCTCATGGGATAGTAAAGTGTCCACCATATGCGCATTTCAGAATCTCCGGGTATTCAGAAGTTATCCGGGTACTTTTCGCCTACTGTTTTTTTGAATACTATAAATTGGGACATACTAATCAAGTGTAGCGTTAGTTCTGGCAGGTCACGTTAGTCAAGCTCGCATCAGCTGATACTCAGCTGATTCACATTGACCTATAGGAATACAATGCCTATCACCGCATTCCTATATATATGGTCCATTCAGTATTATCAGCAGCTTTATTGCATTGCTCAAGAGCTAGTTACCCTCCTCCATCCCCAGCTCCTCCTTTGTCCAGTTAGGACTTGCCCTTCTGATATTTCTCTTGATCAAACTAATTTCTTCAATTATGTTGTTACATTAATTATTGTCATTAAGAAAATGAATGATATTGCAATACTTTGGTTCTGTTCTGTTTACCCTAAGGGGGTTATCGCTGCTCTCCCTGCTCTTTTCCATGCTAGGCTGCATGGATGGGCAGGGAGTTTTTGCCCAGAACAGAACCATCCCGCCAATCCAAACCGTATGCTAACTGCCAGTCATCTTTGACGATAGTAATCCTTACAGAACTCTGTCCGCATACTGTTTTTCGCATACTATATAGTAGAGAAGTATTGGATTATTCAAAGTATTCGACATACACAATACAGCAAAATCTTTATCGACAGACATTTTAACGATATATATCGTCATACCGCCCAGCCCTAATTCCATCCTTACATTTTAGTCAGGTACATCCATGCTTCCGACACTTTAAAATGTAGCCTGTTTGGGCAGCTCACTAGGTTTAGGAAAAGAGCATCTTTCTGAATTAGCATCAGTGCTTGTCACAGAGCTTATCCTCACAGTCCAGCATGAGGACAAATGGTGATGTAACATGCAGACAGAACGCTTAGAGGATATGCAAACCTCATGTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7921 True 1318 lncRNA 0.55 1 11290399 11291716

Neighbor

gene id symbol gene type direction distance location
CI01000000_11272091_11279011 NA coding upstream 11275 11271893 ~ 11279599 (+)
CI01000000_11137352_11139990 NA coding upstream 150374 11136838 ~ 11140025 (+)
CI01000000_11094594_11098001 NA coding upstream 192176 11091508 ~ 11101215 (+)
CI01000000_11075141_11078086 NA coding upstream 212008 11074854 ~ 11078391 (+)
CI01000000_10984317_10995531 TM9S2, TM9SF2 coding upstream 294805 10984317 ~ 10995594 (+)
CI01000000_11335685_11340519 F9A coding downstream 42686 11334402 ~ 11340732 (+)
CI01000000_11381704_11382225 NA coding downstream 88161 11379877 ~ 11382288 (+)
CI01000000_11479843_11484323 NA coding downstream 186311 11478027 ~ 11485062 (+)
CI01000000_11569924_11573883 ARR3, ARR3B coding downstream 278208 11569924 ~ 11574833 (+)
CI01000000_11577295_11582295 NKRF coding downstream 284711 11576427 ~ 11582337 (+)
G7182 NA non-coding upstream 2881 11286697 ~ 11287518 (+)
G7181 NA non-coding upstream 4026 11286048 ~ 11286373 (+)
G7180 NA non-coding upstream 4840 11285239 ~ 11285559 (+)
G7179 NA non-coding upstream 5681 11284233 ~ 11284718 (+)
G7178 NA non-coding upstream 6893 11283094 ~ 11283506 (+)
G7184 NA non-coding downstream 342 11292058 ~ 11292417 (+)
G7185 NA non-coding downstream 1326 11293042 ~ 11293342 (+)
G7186 NA non-coding downstream 1644 11293360 ~ 11294527 (+)
G7187 NA non-coding downstream 3736 11295452 ~ 11295660 (+)
G7188 NA non-coding downstream 4580 11296296 ~ 11297208 (+)
G7153 NA other upstream 44766 11244457 ~ 11245633 (+)
G7018 NA other upstream 309527 10978489 ~ 10980872 (+)
G6820 NA other upstream 857381 10427223 ~ 10433018 (+)
G6811 NA other upstream 968720 10204831 ~ 10321679 (+)
G2850 NA other upstream 6563917 4725986 ~ 4726482 (+)
G7514 NA other downstream 844806 12136522 ~ 12137008 (+)
G7522 NA other downstream 886653 12178369 ~ 12179008 (+)
G9201 NA other downstream 2935721 14215024 ~ 14234941 (+)
G10201 NA other downstream 4638550 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 6047438 17339154 ~ 17346200 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G9591 NA non-coding NC_048565.1 CM023219.2 11004787 ~ 11005103 (+)
tiger barb (Puntius tetrazona) G7733 NA non-coding NC_056699.1 CM032068.1 29842332 ~ 29842629 (+)