mrps23 (LOC107746708,LOC107588353,LOC107666184)


Basic Information

Item Value
gene id mrps23
gene name LOC107746708,LOC107588353,LOC107666184
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 16525725 ~ 16528161 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258252.1
TCCGTAGTAACACCGGAAGTTGTGCATCCATGAGGCAGCAGAGAGCGTGCAACTGTCACTCGTCTTTGACTTTTCTTTGATATTTATAtctaattaaatttatattatcatatagACATACTATGGCTGGAAGTCGACTTGAGAAATTCGGGACTGTTTTTACGCGGGTTCGTGATTTAATGCGAGCTGGAGTCATCAAGCACGAGGAAAAGCCCATCTGGTTTGACGTTTATGCTGCTTTTCCTCCTAAGAGAGAACCTCTCTATGTGAAACCTGTGAGATCACTGAGGAAACGTGCAGCAGCAGACACTGTACCTGAAATCTTATACAAAGAGGATGAAATAAGAGCGAAGTTCTTTGAGGTCTATGGTAATGGACCGAGGCCTTTTGAGCTCTTCAAGCCCAACTTTGTATCGCCATGTCAGAGGTTTGTTATGAAGTATGGTGAATTAGAAAGCAGAGGGGATGTCAAACCCGAGCTGCTGTTTGAAGAGACTGCAAAAGCTCTGCTCGCAGAggacatttatttaagaaagaGAGGAGGATCTGTGCAGGTGGCACCACAGTTTCAGAACCCTTTTCTGAACATGAAGTTGACTGACATGTTGGCAGAGCAGCAAAGAGACAGAGACGCGGAGACAAATATTCCAGAGAAACAGCCAGAGGCAGAGACGGTGAAccctgacagacagacaccgTCATAAATGTCCACTTCTCCTCTGTTAGGACAACATAAACTGCATCTGCCTCTAGCACATCGACGTGCGGGTCACTCATCATTTCTGAGGCATCAAACACTGGAACACAGATATAGTTTGTGCAGCTGTGGACAATATGTTCTGTCTGTTTACCCATCCTGGTGTCAAATGAGCGACGTTGAAGGcatgtttgcataaaaaaaatggcttGGATTTGAGGTCTTTATAGCCAAGCAGCTGGGGTTTAGCGAACAGCTTTATAATACAGATCTAGCAAGTGTTTCATTTATGTGAAAAGTGTCTAATGTcttgtgtaataaaatatgtgGAGTGTTTAATGAAAGTACTTCCAAGTCCATTAACGACAGGAGTGGAAAATCatcagtgttgtaaatactgttatatttctaattttctGAGTCTCGCCATAAACTTTCGGTTCgtattgttttttggttttttttacactgcGTTCTTATTGCTTGTGCAGtcttgcattttaatacatcCTCAACAGGATCTTAAAGAAA
>XM_043258253.1
ATCCGTAGTAACACCGGAAGTTGTGCATCCATGAGGCAGCAGAGAGCGTGCAACTGTCACTCGTCTTTGACTTTTCTTTGATATTTATAtctaattaaatttatattatcatatagACATACTATGGCTGGAAGTCGACTTGAGAAATTCGGGACTGTTTTTACGCGGGTTCGTGATTTAATGCGAGCTGGAGTCATCAAGCACGAGGAAAAGCCCATCTGGTTTGACGTTTATGCTGCTTTTCCTCCTAAGAGAGAACCTCTCTATGTGAAACCTGTGAGATCACTGAGGAAACGTGCAGCAGCAGACACTGTACCTGAAATCTTATACAAAGAGGATGAAATAAGAGCGAAGTTCTTTGAGGTCTATGGTAATGGACCGAGGCCTTTTGAGCTCTTCAAGCCCAACTTTGTATCGCCATGTCAGAGGTTTGTTATGAAGTATGGTGAATTAGAAAGCAGAGGGGATGTCAAACCCGAGCTGCTGTTTGAAGAGACTGCAAAAGCTCTGCTCGCAGAggacatttatttaagaaagaGAGGAGGATCTGTGGTGGCACCACAGTTTCAGAACCCTTTTCTGAACATGAAGTTGACTGACATGTTGGCAGAGCAGCAAAGAGACAGAGACGCGGAGACAAATATTCCAGAGAAACAGCCAGAGGCAGAGACGGTGAAccctgacagacagacaccgTCATAAATGTCCACTTCTCCTCTGTTAGGACAACATAAACTGCATCTGCCTCTAGCACATCGACGTGCGGGTCACTCATCATTTCTGAGGCATCAAACACTGGAACACAGATATAGTTTGTGCAGCTGTGGACAATATGTTCTGTCTGTTTACCCATCCTGGTGTCAAATGAGCGACGTTGAAGGcatgtttgcataaaaaaaatggcttGGATTTGAGGTCTTTATAGCCAAGCAGCTGGGGTTTAGCGAACAGCTTTATAATACAGATCTAGCAAGTGTTTCATTTATGTGAAAAGTGTCTAATGTcttgtgtaataaaatatgtgGAGTGTTTAATGAAAGTACTTCCAAGTCCATTAACGACAGGAGTGGAAAATCatcagtgttgtaaatactgttatatttctaattttctGAGTCTCGCCATAAACTTTCGGTTCgtattgttttttggttttttttacactgcGTTCTTATTGCTTGTGCAGtcttgcattttaatacatcCTCAACAGGATCTTAAAGAAA

Function

NR:

description
PREDICTED: 28S ribosomal protein S23, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K17402 MRPS23; small subunit ribosomal protein S23

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258252.1 True 1228 mRNA 0.42 5 16525726 16528161
XM_043258253.1 False 1226 mRNA 0.42 5 16525725 16528161

Neighbor

gene id symbol gene type direction distance location
nos2b nos2,LOC107588374,LOC107666185,LOC107756441 coding upstream 67 16514348 ~ 16525658 (+)
nlk2 nlk2,nlk,LOC106581270 coding upstream 17637 16442906 ~ 16508088 (+)
nufip2 nufip2,LOC107714169,LOC107666195,LOC107592914,LOC107756500,LOC107587528,LOC107682614 coding upstream 91840 16423297 ~ 16433885 (+)
LOC122358452 zgc:153372,LOC107682590,LOC107587555,LOC107757291 coding upstream 277095 16244788 ~ 16248630 (+)
LOC122359064 LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107589737,LOC107756533 coding upstream 285369 16230809 ~ 16240356 (+)
LOC122359007 NA coding downstream 277263 16805424 ~ 16807691 (+)
omgb LOC107587445,LOC107672106,LOC107746657,LOC107592923,LOC107682744,LOC107756362 coding downstream 281076 16809237 ~ 16816847 (+)
LOC122359144 LOC107588342,LOC107672102,LOC107683437,LOC107757408,LOC107592926,LOC556987,LOC108425804 coding downstream 429998 16958159 ~ 16959238 (+)
LOC122358372 or116-1,LOC107683394,LOC107757262,LOC107592963,LOC107757255,LOC107592965,LOC107683395 coding downstream 438272 16966433 ~ 16967368 (+)
LOC122358381 nlk1,nlk,LOC107678874,LOC107582859,LOC107754939,LOC107684639,LOC108410603 coding downstream 463634 16991795 ~ 17017279 (+)
LOC122358549 NA non-coding upstream 168103 16336814 ~ 16357622 (+)
G107232 NA non-coding upstream 181070 16344382 ~ 16344655 (+)
G107145 NA non-coding upstream 358720 16139813 ~ 16167005 (+)
G107141 NA non-coding upstream 455984 16069484 ~ 16069741 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding upstream 523594 16000215 ~ 16002131 (+)
LOC122358872 NA non-coding downstream 1119 16529280 ~ 16578656 (+)
LOC122359009 NA non-coding downstream 254918 16783079 ~ 16787674 (+)
G107305 NA non-coding downstream 330074 16858235 ~ 16859096 (+)
G107307 NA non-coding downstream 331543 16859704 ~ 16860627 (+)
G107308 NA non-coding downstream 332609 16860770 ~ 16860988 (+)
lyrm9 lyrm9,LOC107756492 other upstream 11504 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 289384 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 482460 16004869 ~ 16043265 (+)
G107107 NA other upstream 642215 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 813286 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 1261684 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 1303911 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 1516856 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 2228182 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 2231421 18759582 ~ 18760497 (+)

Expression


Co-expression Network