LOC122358452 (zgc:153372,LOC107682590,LOC107587555,LOC107757291)


Basic Information

Item Value
gene id LOC122358452
gene name zgc:153372,LOC107682590,LOC107587555,LOC107757291
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 16244788 ~ 16248630 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258259.1
GCGCGTTCATGTTGATCGTTCGTTTCTGCGGGAACAGTTTTTAGGAAGGACTTTACCCCCTGAAGTTGGATATAGAAGTATTACCGCGAGCAGTGCACAACTAATGCGTTACATTTCCAGGGCATTCGCTTTCCCAGCAGCACAAACTGGAAGGCAAAACTACAGCTACATTCCGTTCGCTTTTATGAACCACGCTGCTACATTTCTACGCATTTTAGCTGTCCGGCGTACAGTTCAAATCTTTAACATGTGTTCTGCTGTTCATGAAAACGTGAAGaacTACTATGGCTCTCGGCTGGAGACTTCAGATGACTTACAGACCAATGCTGCGTGTGTCATGCCCTCCAGACCTCTGCCCAAAAGCGCATGCGAGGCCCTAAAACAAGTCCACCCAGATGTTTGCAAGAGGTATTTTGGCTGTGGGCTGGTGATTCCAGAAAAACTGGAAGGATGCACGGTTCTTGATCTGGGCAGTGGATCGGGCAGAGACTGCTTCGTCCTCAGCAAACTGGTGGGGGAGAGAGGTCAAGTCATCGGACTGGATATGACGGATGAGATGATAGTTGCTTCACAAAAATATGCCCAGTACCATCAGGAGAAGTTTGAATACTCAAAACCAAACACTGTGTTTGTGAAAGGATACATGGAGAAGCTCAGCGATGCAGGGATACAGAACAGCTCTTTGGACGTAGTTGTGTCAAACTGTGTGATATGTCTGTGCCCAGATAAGAGGACCGTGATAAGTGAAGCTTACAGAGTTCTGAAGGAAGGTGGAGAGTTGTACTATAGTGACATGTATGCAAGCGAAGTAGTTCCAGACTCTTTCAAGGAAGATCCAGTTCTGTGGGGTGAAGGAATGGCCGGCGCCCTCTACTGGCAGGATCTCATCTCTTTAATAAAGGACATAGGCTTCAGCACTCCTCACCTGGTTGCAGGCAGTCACATAGTGGTTCACAACCCAGAACTTCAAAGAAAGACTGGTGATGTTAAATACGCATCTGGAACTTACCGGATCTTTAAACTCCCTCAAAACTCCATCGAGACCAGAGCGCTGGTGACCTATAAAGGCACTGTGCCTGACTGTGCTGAACGTTTTGAGTTTGATGCCTCTCATTCCTTTAAGACAAATGTCCCAGTGGAAGTGGGTGCAGAAATGGCTGCCGTTCTCCAGAACAGCCGTTTCTCTATGGATTTTAGCATTACAATGTTAGACACTCCAGATCCAAACCAGAGCAGTACTCCAAAGtattgCCACCTTAGCCCGTTCCTTCTTGCGGATAAACTGGGCTCCTCAGTCAAACAGTGCTCCAAGACTGGACTCTAAGGTAAATGTGGAGAGTCCGGTGGATCATGTGATGACTGGATCACTTGAGATGATGTGATGGGAAGTGAGAGTATAGGATGTCTTTAGTTCTCAAGTGATCAAGTTTTCTTTGAACTTGAGAAAGCTGTTTGTCGTGTTAATTGtagaataactttttaaaataccaGGGTCCTCaacaataaacaacattaaaaagtcttaacattttaattaatattttaataattgttattcaagaaaaaaaaaacgaatcaaGATCTTTCtcagtggattttttttctttcttgtttttattttaaatgttttaaaagctgaTTTTACTGGcctctatttttttgtttcttataagATTATAAACCAACTCAAAGTATTGGCACTTGTTTTCCATTCTGTATGAAATAAGGCGGTGCTGATATTGATATTGATGCACAGTACGCTCATTACGCTGTTAAATTAATCTCTCGGCAACACaaatgatttttgcatttttctagATGACTTCTTGTTTCAGTTGATTTAGTACCAAGCTTTTTGTTAATTCCACATATATAATGCCACAGCATTGTAGTTGTTTgccattttacttttactcttTTTATGGCCTGGCTGTTgggtatataaaaataatcactGCTCTGCTGTCATTTATTTGGTACACGTTTACCAACAACACAACTGTATCAGCGAGGAACACTGCTGAAATGACATACTGCATAAGACAAGATGAGCAGAACAAAATCTAtgtcagaaaatatttttaatatgcatcatTTCAATCTGGAATTTTTTCGAAACATaagtatgaaaataattaatccTGTGTATTTAGAGTGAATAAAATACCACATTTGAATTTA

Function

symbol description
zgc:153372 Predicted to enable arsenite methyltransferase activity and methylarsonite methyltransferase activity. Predicted to be involved in arsonoacetate metabolic process and toxin metabolic process. Predicted to be active in cytosol. Orthologous to human AS3MT (arsenite methyltransferase).

NR:

description
PREDICTED: arsenite methyltransferase-like

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0005829 cytosol cellular_component
GO:0030791 arsenite methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258259.1 True 2181 mRNA 0.41 10 16244788 16248630

Neighbor

gene id symbol gene type direction distance location
LOC122359064 LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107589737,LOC107756533 coding upstream 4432 16230809 ~ 16240356 (+)
zgc:153372 zgc:153372,LOC107682590,LOC107587555,LOC107757291 coding upstream 117145 16124547 ~ 16127643 (+)
nrip1a LOC107714172,LOC107587564,LOC107666194,LOC107682571,LOC107756533,LOC107589737 coding upstream 124222 16110508 ~ 16120566 (+)
gucy2f gucy2f,LOC107714181,LOC107666202,LOC107589733,LOC107682463,LOC106613073 coding upstream 248796 15986079 ~ 15995992 (+)
rap1gap2a rap1gap2,rap1gap2a,LOC107666198 coding upstream 275585 15910486 ~ 15969203 (+)
nufip2 nufip2,LOC107714169,LOC107666195,LOC107592914,LOC107756500,LOC107587528,LOC107682614 coding downstream 174667 16423297 ~ 16433885 (+)
nlk2 nlk2,nlk,LOC106581270 coding downstream 194276 16442906 ~ 16508088 (+)
nos2b nos2,LOC107588374,LOC107666185,LOC107756441 coding downstream 265718 16514348 ~ 16525658 (+)
mrps23 LOC107746708,LOC107588353,LOC107666184 coding downstream 277095 16525725 ~ 16528161 (+)
LOC122359007 NA coding downstream 556794 16805424 ~ 16807691 (+)
G107145 NA non-coding upstream 77783 16139813 ~ 16167005 (+)
G107141 NA non-coding upstream 175047 16069484 ~ 16069741 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding upstream 242657 16000215 ~ 16002131 (+)
G107113 NA non-coding upstream 350164 15894133 ~ 15894624 (+)
G106941 NA non-coding upstream 606759 15637174 ~ 15638029 (+)
LOC122358549 NA non-coding downstream 88184 16336814 ~ 16357622 (+)
G107232 NA non-coding downstream 95752 16344382 ~ 16344655 (+)
LOC122358872 NA non-coding downstream 280650 16529280 ~ 16578656 (+)
LOC122359009 NA non-coding downstream 534449 16783079 ~ 16787674 (+)
G107305 NA non-coding downstream 609605 16858235 ~ 16859096 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 8447 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 201523 16004869 ~ 16043265 (+)
G107107 NA other upstream 361278 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 532349 15706513 ~ 15712439 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other upstream 1316563 14912911 ~ 14928225 (+)
lyrm9 lyrm9,LOC107756492 other downstream 264678 16513308 ~ 16514221 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 1541215 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 1583442 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 1796387 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 2507713 18756343 ~ 18758836 (+)

Expression


Co-expression Network