XLOC_006693 (CT025887.1)


Basic Information

Item Value
gene id XLOC_006693
gene name CT025887.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30632105 ~ 30632219 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012895
GcaggcagctagctctctgcaactcttacatagtcacccactgaagctaagtagggctgtgcccagtcagtacctggatgggggaccacatgggaaagctaggctgCTGCTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110783

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012895 True 115 rRNA 0.56 1 30632105 30632219

Neighbor

gene id symbol gene type direction distance location
XLOC_006691 NA coding downstream 60962 30568567 ~ 30571143 (-)
XLOC_006690 NA coding downstream 80596 30549409 ~ 30551509 (-)
XLOC_006689 NA coding downstream 381541 30245673 ~ 30250564 (-)
XLOC_006688 ppa1b coding downstream 470421 30152217 ~ 30161684 (-)
XLOC_006687 sar1ab coding downstream 481513 30144937 ~ 30150592 (-)
XLOC_006694 si:dkey-275b16.2 coding upstream 22953 30655172 ~ 30662403 (-)
XLOC_006695 rassf4a coding upstream 32600 30664819 ~ 30700460 (-)
XLOC_006696 CT025887.2 coding upstream 51967 30684186 ~ 30685913 (-)
XLOC_006697 tmem72 coding upstream 72142 30704361 ~ 30713236 (-)
XLOC_006698 NA coding upstream 176744 30808963 ~ 30812183 (-)
XLOC_006471 BX537274.2 misc downstream 20367200 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 29805880 825904 ~ 826225 (-)
XLOC_006682 NA non-coding downstream 646603 29984877 ~ 29985502 (-)
XLOC_006680 NA non-coding downstream 689143 29937395 ~ 29942962 (-)
XLOC_006699 CR762493.2 non-coding upstream 223100 30855319 ~ 30872439 (-)
XLOC_006703 BX005005.3 non-coding upstream 410295 31042514 ~ 31051156 (-)
XLOC_006704 BX005005.2 non-coding upstream 420317 31052536 ~ 31061816 (-)
XLOC_006705 BX005005.1 non-coding upstream 443614 31075833 ~ 31075947 (-)

Expression


Co-expression Network