zgc:153372 (zgc:153372,LOC107682590,LOC107587555,LOC107757291)


Basic Information

Item Value
gene id zgc:153372
gene name zgc:153372,LOC107682590,LOC107587555,LOC107757291
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 16124547 ~ 16127643 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258313.1
TTGGATATAGAAGTATTACCGCGAGCAGTGCACAACTAATGCGTTACATTTCCAGGGCATTCGCTTTCCCAGCAGCACAAACTGGAAGGCAAAACTACAGCTACATTCCGTTCGCTTTTATGAACCACGCTGCTACATTTCTACGCATTTTAGCTGTCCGGCGTACAGTTCAAATCTTTAACATGTGTTCTGCTGTTCATGAAAACGTGAAGaacTACTATGGCTCTCGGCTGGAGACTTCAGATGACTTACAGACCAATGCTGCGTGTGTCATGCCCTCCAGACCTCTGCCCAAAAGCGCATGCGAGGCCCTAAAACAAGTCCACCCAGATGTTTGCAAGAGGTATTTTGGCTGTGGGCTGGTGATTCCAGAAAAACTGGAAGGATGCACGGTTCTTGATCTGGGCAGTGGATCGGGCAGAGACTGCTTCGTCCTCAGCAAACTGGTGGGGGAGAGAGGTCAAGTCATCGGACTGGATATGACGGATGAGATGATAGTTGCTTCACAAAAATATGCCCAGTACCATCAGGAGAAGTTTGAATACTCAAAACCAAACACTGTGTTTGTGAAAGGATACATGGAGAAGCTCAGCGATGCAGGGATACAGAACAGCTCTTTGGACGTAGTTGTGTCAAACTGTGTGATATGTCTGTGCCCAGATAAGAGGACCGTGATAAGTGAAGCTTACAGAGTTCTGAAGGAAGGTGGAGAGTTGTACTATAGTGACATGTATGCAAGCGAAGTAGTTCCAGACTCTTTCAAGGAAGATCCAGTTCTGTGGGGTGAAGGAATGGCCGGCGCCCTCTACTGGCAGGATCTCATCTCTTTAATAAAGGACACAGGCTTCAGCACTCCTCACCTGGTTGCAGGCAGTCACATAGTGGTTCACAACCCAGAACTTCAAAGAAAGACTGGTGATGTTAAATACGCATCTGGAACTTACCGGATCTTTAAACTCCCTCAAAACTCCATCGAGACCAGAGCGCTGGTGACCTATAAAGGCACTGTGCCTGACTGTGCTGAACGTTTTGAGTTTGATGCCTCTCATTCCTTTAAGACAAATGTCCCAGTGGAGGTGGGTGCAGAAATGGCTGCCGTTCTCCAGAACAGCCGTTTCTCTACGGATTTTAGTATTACAATGTTAGACACTCCAGATCCAAACCAGAGCAGTACTCCAAAGtattgCCACCTTAGCCCGTTCCTTCTTGCGGATAAACTGGGCTCCTCAGTCAAACAGTGCTCCAAGACTGGACTCTAAGGTAAATGTGGAGAGTCCGGTGGATCATGTGATGACTGGATCACTTGAGATGATGTGATGGGAAGTGAGAGTATAGGATGTCTTTAGTTCTCAAGTGATCAAGTTTTCTTTGAACTTGAGAAAGCTGTTTGTCGTGTTAATTGTagaataacttttttaaaataccagGGTCC

Function

symbol description
zgc:153372 Predicted to enable arsenite methyltransferase activity and methylarsonite methyltransferase activity. Predicted to be involved in arsonoacetate metabolic process and toxin metabolic process. Predicted to be active in cytosol. Orthologous to human AS3MT (arsenite methyltransferase).

NR:

description
arsenite methyltransferase-like

GO:

id name namespace
GO:0005829 cytosol cellular_component
GO:0030791 arsenite methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258313.1 True 1432 mRNA 0.46 10 16124547 16127643

Neighbor

gene id symbol gene type direction distance location
nrip1a LOC107714172,LOC107587564,LOC107666194,LOC107682571,LOC107756533,LOC107589737 coding upstream 3981 16110508 ~ 16120566 (+)
gucy2f gucy2f,LOC107714181,LOC107666202,LOC107589733,LOC107682463,LOC106613073 coding upstream 128555 15986079 ~ 15995992 (+)
rap1gap2a rap1gap2,rap1gap2a,LOC107666198 coding upstream 155344 15910486 ~ 15969203 (+)
zgc:113149 LOC107669760,LOC107714186,LOC107587722,LOC107756630 coding upstream 218151 15901294 ~ 15906396 (+)
zgc:101731 zgc:101731,LOC107587749,LOC107669759,LOC107757427,LOC107714187,LOC107683430,LOC108425805 coding upstream 223913 15893397 ~ 15900634 (+)
LOC122359064 LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107589737,LOC107756533 coding downstream 103166 16230809 ~ 16240356 (+)
LOC122358452 zgc:153372,LOC107682590,LOC107587555,LOC107757291 coding downstream 117145 16244788 ~ 16248630 (+)
nufip2 nufip2,LOC107714169,LOC107666195,LOC107592914,LOC107756500,LOC107587528,LOC107682614 coding downstream 295654 16423297 ~ 16433885 (+)
nlk2 nlk2,nlk,LOC106581270 coding downstream 315263 16442906 ~ 16508088 (+)
nos2b nos2,LOC107588374,LOC107666185,LOC107756441 coding downstream 386705 16514348 ~ 16525658 (+)
G107141 NA non-coding upstream 54806 16069484 ~ 16069741 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding upstream 122416 16000215 ~ 16002131 (+)
G107113 NA non-coding upstream 229923 15894133 ~ 15894624 (+)
G106941 NA non-coding upstream 486518 15637174 ~ 15638029 (+)
G106926 NA non-coding upstream 613437 15510317 ~ 15511110 (+)
G107145 NA non-coding downstream 12170 16139813 ~ 16167005 (+)
LOC122358549 NA non-coding downstream 209171 16336814 ~ 16357622 (+)
G107232 NA non-coding downstream 216739 16344382 ~ 16344655 (+)
LOC122358872 NA non-coding downstream 401637 16529280 ~ 16578656 (+)
LOC122359009 NA non-coding downstream 655436 16783079 ~ 16787674 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 81282 16004869 ~ 16043265 (+)
G107107 NA other upstream 241037 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 412108 15706513 ~ 15712439 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other upstream 1196322 14912911 ~ 14928225 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other upstream 2162740 13957197 ~ 13961807 (+)
lyrm9 lyrm9,LOC107756492 other downstream 385665 16513308 ~ 16514221 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 1662202 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 1704429 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 1917374 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 2628700 18756343 ~ 18758836 (+)

Expression


Co-expression Network