LOC122358500 (LOC107718289)


Basic Information

Item Value
gene id LOC122358500
gene name LOC107718289
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13604091 ~ 13667411 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258318.1
GCCTACATTTTTGGGGGTGGGGAAAAAGCTGGAGAGCGTTGCAGCGGTGGTACTTGgggttttatttttagcctCTTCGCGACCCTCTACCACGACAGCtgtctccctcctcctccttctcctctgaCAGAGCAGAGTCAGGAATAGCCTATCACTTTGCACCTCTCAGAATTTAGGCTGCCGGTTAGTTTGACGTGGGTCTTGTGGTTCTCAGGACCGTCTTTCTggctcaaatacacacacatgctctcgTCTCACAGCTTTGGTTGGCACTCATCTGCGCTCTGACCTTGGTGGGGAACGACTTTCAGTGTTTGGAGCTGCTGCAAAAGATCTCAGAGCCAAGAGCCTCCTCTTCTTTCCAGCATTGTGGGTCTTATTTACCTGAAGTTTGTGACCTCACGTAACATAACTGTGAAGATCAGCATCCATTCTGCCAGCCTCTTGTCTGCTGGTCCCTTCATCTGTCACTCATCTTTTCATCCCGCCCTCCCTCCCTCATCAAACCCTTACCCGGCCCAGCCCATGACAGCAGCGTTGCCAGCATGGCATTCTCATCACGCTTTTCCTTCTGGGAGCAAAAGATCAAAGAAGAGAACAAGCCAATCCCCAAGAATTCAAAAGACAATTCTGACAGCGATGGCAGTCTGAGTAGCCGTTCCCAGTCAGTTCCCAGCCTGGAGCCTGGCAGAGGCCTACTTCGAGCCAAAAGTCCTCAGCCTGTTCAGGACGAACCCACAGAGATCCAGTCTCAATCTCTGTTCAGGCGAGTCAAAAGCCCTTCACCTAACAGAGACAAGATGGCAACCAGAAAGTTCTCTGAAGTTCCCAAAATGCCAGAGCGCTTCAAAAGCCCTGAGCCTCCCCGAAGTCCCTTGAGCCCTGAACCTTTCCAGAATGGAGAAAGCAAAATTAATGTTACCCTTAATGGCAGTGTAAAGACTACAGCAAGTGCCAGTCAACCAGAACTCACAGAGGACTTGCAGGGTGGGACTCGTAAGAAGGTGGTAAAGGTGGTACGCAGAGTGGTTAGGAGGGTAGTTCCTGCTGAAGAAGACACTGCAACAAACCCTGTAGCCATGTCACCAGAACCATCTAAACCAGCTTTAGAATCACTGAAACCTGAACCAGCATCTGTTCCAAAAGTTGTAAAGATGCCTGTGTTCTCCTTCAAACATGATTCCATAAAGAAGGAGGAAAGAGATGATATCTCTGTTGGACTGACAAGTTTAATGACACGAGGCAGGACCAGAGAACCTCGTCCGCGCATTCGCAAGGATGAGCCTCCTGAAAAAGAGGATGTGAAAGCTGTAGAGAAATCTCAAAAGAAGGAAATTTCTGGACCAGCACAAGATAAAACTGTTCCGAATGTAGAGGCCTCTCAGAATCCAAAACAAGAGCCACAGACTTCAGCATCTCCTGCTATCTTGACGACTCCCAAGTCTCTTGTTTCACCACCAGCAGGATTCATCCCAACCCCAAAACCCAATCCACTCTCTCCCCCATCTGGTTTTGTTCCTACACCGAAACCCTTAGGATTTTCCACCACCTCAAAACCATCTACTCTTTCCCCTCCAGCAGGCTTTATTCCTGCTTCAAAACCTTCTCCTGTGACTCCTGCTGGATTTGTTCCAACAGCTCCTATTGTTTCTCCACCTTTAGCCCCTATTTCAGATCCCAAAACATTGCCTGTTATCCCGGGTTCCACACCTGCTGTTCCTAAAGCAGCTGCTACTTCTGCTCCAACCGCTCCTGGTAAATCCAACACCCATAACCCCCCGGCCCCCAAAACAGATCCATTTGCCCCTCCATCAGGGTTCATTCCCACCAATAAACAGATACCTATGAAGAAACCAGAGGTGAAGATGGCCATACGTGTGCCACCAAGTCAAGCAGGGAGACCTTCTCCTGGGAGCATTTCTAAACCCTCTCTACCAACCTTGTTCAAaaagGAGAGTCCGCCACTGAGTCCCACAGAAGAAGCACAGAGACGGCTGGAGAAGATCTTCGCTGCACCTCTGGAACCTGTGGCCAGTGCCTCTGCGTCGTCTCAGGGACAGGTGGAGGAGGACCCCGTGGCAATCCTAAAGGCAGACCATGCCGCTGCCGCCCATCCTAAGGTGAAAACAGAGGAGCAGATAGCTGCAGAGCAGGCATGGTACGGTACGGAGAAAGTGTGGCTGGTCCACAAGGATGGATTCTCTCTGGCCACTGTTGTGAAGACAGAGGCTGGAAGTCTACCAGAGGGGAAAGTGAAAATCAAACTGGAGCATGATGGGACAGTACTGGACGTGGACGAAGATGACATAGAGAAGGCGAACCCTCCGTCATTTGACCGCTGCGAGGACTTGGCAGCTCTGCTCTATCTGAACGAGTCCAGTGTCATGCATTCCTTGCGCCAGCGCTATGGAGGAAATCTCATCCACACATACGCAGGGCCCAACATGGTGATCATCAACCCTACCAGCGCCCCCTCCATGTACTCAGAGAAGGTGATGCACATGTTCAAAGGCTGTCGGCGGGAAGACACAGCCCCTCATATATATGCAGTGGCCCAGTCAGCCTACCGAAATCTTTTGACAACACGGCAGGACCAGTCTGTAGTGCTGCTGGGAAAGAGCGGCAGTGGCAAGACCACAAACTGCCAGCATTTAGTCCAGTACCTGGTGTCCATCGCAGGCAGCACCGGAAAGATCTTTACTGCTGAGAAATGGCAAGCTGTCTACACAATCCTAGAGGCCTTTGGAAACAGTGCCACCTCCATGAACAATAACGCAAGCCGCTTTTCCCAGATCGTCTCGCTGGATTTTGACCAGGCTGGTCAGGTGGCCTCTGCCTCCATTCAGACAATGCTGCTGGAGAAGCTGCGAGTGGTAAAACGACCAGAGACCGAGTccacttttaatgttttttattacatgatGGCTGGAGCAGATAGCACACTTAGaacggagtTGCATTTTAACCACTTTGCAGAGAACAGCGCTTTTGGGATTGTGCCTCAAACTAAGtCTGAGGACAAGCAAAAGGCATCACAACAGTTCACTAAACTGCAGGCAGCTATGAAGGTTCTGGGCATCTCTTCTGATGAACAGAAAGCTCTGTGGCTCATCCTTGGAGCCATTTACCATCTTGGAGCTGCAGGAGCCACGAAAGAAGCTGATGAAGCGGGTCGGAAACAATTTGCACGCCACGAGTGGGCCCAGAAGGCGGCTTACCTCTTGGGTTGCACCCTAGAAGAACTCTCGTCTTCTATCTTCAAACACCAGCCCAAGGGAACCTTACAGAGATCCACCTCATTCCGCCAGGGACCAGATGATACCGGGACAGGAGAAAACTCGGCTCCAAAGATCACAGCTCTGGAGTGTCTGGAGGCCATGGCTGCTGGACTCTACTCTGAACTCTTTACTCTGGTCATCTCACTTGTTAACCGAGCGCTGAAGTCGAGTCAGCATTCCCTGTGCTCTCTGCTTATTGTGGACACACCGGGATTCCAGAACCCAAAGTTTACGAAGCGGGACCGCGGAGCCACCTTTGAGGAGCTGTGCCACAACTATACACAAGAACGTCTACAAACGCTTTTCCACGAACGCACTTTTGTACAGGAGCTAGAACGCTACAAGGAGGAAAACATAGAGCTTGCATTAGATGACATAGAGTCCAGTACGTCACTCTCTGTATCAGCTATAGACCAAGCCTCCACTCAAGCATTGGTGCGGACCTTGGCCAGGACAGATGAGGCGAGGGGCCTGCTGTGGCTGATGGAGGAGGAAGCTCTGCAGCCCGGGGGCTCAGAGGAAACTCTACTGGAGAGACTCTTCAGTTATTACAGCCCTGTGGATGGAGAGAGCAAAGGCCCTGCCCTGCTGCTAAAGAGTGAGAAGGCACATCACTTCCTGTTGGGTCACAGCCATGGGACTGACTGGGTGGAATATGATGCTAGCGGCTGGTTGAACCATGCCAAACAGAATCCTGCCTCCCAGAATGCAGCCATTTTACTGCAGGACTCTCAGAAGAAGAATATCAGTGGCTTGTTTATGGGGCGTTCAGGGGGAGCCACAGTTTTGTCGGGCTCTATTGCTGGGCTTGAGGGCGGATCACAGCTGGCCCTGCGCAGGGCCACAAGTATGAGAAAGACCTTCACCACTGGTGTGGCGGCTGTTAAAAAGAAGTCCCTCTGCATTCAGATTAAACTGCAAGTAgaTGCGCTTATAGACACGGTGCGGCGGTCCAGGGTGCACTTTGTGCACTGTCTGCTGCCTAAAGCAGAGACGCCGGCTGGGGATTTAAAGGTGTTAGGACCGTCATCTCGCTCTGGGGAGATAGATGCACAGGGAGAAAGCTGTGACAACGGCCTCATGCAGCTGGATGTGTGCTTGCTCCGAGCACAGCTGCGTGGCTCCAAACTGCTCGACGCCCTGCGTATCTACCGCCAAGGTTATCCCGATCATTTGGTCTTCTCGGAGTTCCGTCGCCGCTTTGATGTGCTGACTCCTCATCTGACAAAGAAACATGGGCGGAACTACATTGTAACCGATGAGAGAAGGgctGTCGAGGAGCTGCTGGAATCTCTTGAGCTGGAAAAAAGCAGTTATCACATGGGCTTGAGCAGGGTGTTCTTCAGGGCAGGAGTTTTGGCTAAGCTAGAGGAGCACAGAGATATCCAAACCAGACGCAACATCACCCTGTTTCAGGCTGCTTGCAGGGGCTACTTGGCCCGACAAGCCTTCAAGAAAAGAAAGatcCAGGACTTGGCAATCCGCTGCATCCAGAAAAACATCAAGAAGAACCGGGGTGTTAAAGGCTGGCCGTGGTGGAAGCTCTTCACCACCGTCCGTCCTCTCATCGAGGTTCAGCTTACAGAGGAACAGATCCGCGGCAAAGACGAGGAAATTCAGCAACTCAAGTTGAAGCTGGAGAAGGTTGAGAAGGAGAGGAATGAGTTGAGACTCAATAGTGACCGACTGGAAAGCAAGATCACAGAACTCTCATCAGAGCTCGCCGATGAGCGCAACACGGGCGAATCTGCCTCGCAGCTGCTGGAGTCCGAGACCTCGGAGAGACTTAGGCTAGAGAAAGACATGAAGGATCTACAGGCCAAGTTTGACGCTATGAAGAAGCAGATGGAGTCTATGGAGATGGAGGTGATGGAGGCACGACTCATACGGGCATCAGAGCTCAACGGGGAAATGGACGACGACGACACTGGTGGAGAATGGAGGCTCAAGTATGAGAGAGCCATCAGAGAAATCGAGTTTACCAAGAAGAGACTCCAGCAGGAGTTTGATGATAAACTAGAGGTTGAGCAGCAAAACAAGAGGCAGCTGGAGAGAAAGCTGACAGACCTGCAGGCAGACAATGAAGAGGTGTGCAGCGCGGCGCAGCAGCTGAAGAAGAAATGCCAGAGACTGACAGCCGAGCTGCAGGACACCAAACTGCACCTGGAGCAGCAGAGCCGCAACCATGACCTGGAGAAAAAACAGCGCAAGTTTGACTCAGAGCAGACTCAGGCTCAAGAGGAGGTGCAGAGAGAGAAGAGTCAGCGGGAGAAActgagcagagagaaagacatgCTGACCGGGGAAGTGTTCAGCCTCCGACAACAACTGGAGgataAGGATCTGGAGATATGTGCTGTCAATCTGAAGCTCGAGCAAATGGAGGCAGAGCTTCAAGATCTAAACTCGCAGGAGACAAAGGACGAGGCGTCATTGGCCAAGGTTAAAAAGCAGCTTCGTGACCTTGAGGCAAAGGTCAAAGATCAAGAAGAAGAGCTTGATGAACAGGCTGGAACCATTCAGATGCTGGAGCAGGCCAAGCTCCGTCTGgagatggagatggagagaCTCAGACAGACGCATTCGAAAGAGATTGAGAGCAAAGACGATGAGGTGGAGGAGATCAGACAGTCCTGCAGCAAGAAGctcAAGCAAATGGAGGTGCAGCTGGAGGAGGAGTATGAAGAGAAGCAGAAGGTCTTGCGGGAGAGAAGGGACCTGGAAACCAAGCTGATGAGCGCTCAAGACCAGGTGAGCCACAGAGATGTGGAGACAGAAAAGCGTCTGAGGAAAGACCTGAAGCGTACAAAGGCCTTGCTGGCTGATGCCCAGATCATGCTGGATCACTTGAAGAACAATGCTCCCAGCAAGAGAGAGATTGCTCAGCTCAAGAACCAGCTCGAGGAGTCGGAATTCACATGTGCTGCTGCCGTCAAAGCACGAAAGTCAATGGAAGTGGAGATTGAGGACCTCCATGTCCAAATGGATGACATATCTAAATCCAAGCAGGCGCTTGAGGAGCAGCTGAGTCGATTGCAGAGGGAGAAGAATGACCTGCAGTCCCGCATGGAGGAGGATCAGGAGGACATGAACGAACTCATGAAGAAACACAAAGCCGCTGTTGCCCAGTCCTCACAGAACCTGGCCCAGATCAGTGACCTGCAGGCCCAGCTGGAGGAGGCCATGAAGGAGAAACAGGACGTCCAGGAGAAGCTCACAGCCCTGCAGAGTCAGCTAGAGTTCCAAGAGCAGTCCATGGTGGACAAGTCTCTGGTCAGCCGGCAGGAGGCCAAGATCCGTGAGCTGGAGACCAAGCTGGAGTTTGAGAAGACACAGGTCAAACGCTTGGAGAGTCTTGTAGCGAGGCTGAAAGAGAATCTCGAGAAGTTGACTGAGAGGAGAGACCAGCGCAGTGCCAGCGAGAATCGGGAGAAAGAGCAGAACAAACGTCTCCTGAGGCAGATCCGAGACGTCAAAGAGGAGATGGCCGAGCTGGCCAAGAAGGAAGCGGAAGCCAGCCGCAAGAAACACGAGCTGGAAATGGATATTGAGAGTTGGGCGGCCAATCAGAGTCTCCAGGCAGATCTCAAGCTGGCCTTTAAGAGGATCGGAGACCTCCAGGCTGCTATTGAGGATGAGATGGAGAGCGATGACAATGAGGATCTCATCAACAGTTTACAAGACATGGTGACTAAGTATCAGAAACGAAAGAACAAAATCGAGGGCGCCTCTGATACCGACTCTGAGGTGGAGGACCGCGTTGATGGGGTGAAGTCATGGCTGTCCAAAAACAAGGGCTCTGCCAAGAACCTGTCAGATGATGGTAGTCTGAAGAGCTCAAGATTTGCTGTAAATGTTGACGGAAAGGGGAAAGAGTGGGAAGAGGGTAAAGAATGGAAAGACAGTGGCAAAGGTAAAGAGTTAGAACCCATCAGGCCTGTGTCTGTCATGAGTTCCCTCAGCTACAGGAAACGCTCCAACATGAAGGACTCCATAGGAGGTAAGGGGGATGAGAGTTCGCTCCTCAACACCCTCAAAGAACAATCTGATTCCCAGGACCTGTCTTCCTTCCGCAAGAACAAAGCCAAGCAGGAAGCTGAGGATGACTCCTACTCTGTCAACTCCTGGAGGAAGGCGGGAGATGATCTTGAGGATCGTGGATCTGTCATCTCTCAGGCCTATTCGGAAGCAGCTAGTCGGGCAAGGAAGGGCATGGAGAGCCGCTGGTCTGAGTTCGATAAGGAGTCTGTTGTGTCCTCTGTAGCCCCAAGCCGGGTTTCCACCTGCCGTACTGCGATGGACCTAGATGACGATGCTATTTCCAGCGTGAGTCGCATGAGTTCAGTAAGCCGGCGTCGGAGCATGCCTCGTCTTGACGATCGCCAGAGTGAATATGGTTCACCTGTAAGCCCTAGCTTGAGTCGACGTAGCCCTGGAAGTGTGAGCCGTGCCGATTCCCGTATGTCGCTGTCTCGCAGCTGTCGCCTCAGTGAATTTGACGTGGATGACGATGCCCGAAGCATAGCATTCAGTGAGGCTCGCTCCAGCGCTTACAGCCCCCACTCAACCTCCGGCCGAAGCTTCTCCATGCCTCCGCAAGCCCGGACCACTGACTCCAGTCCGCCTGATGTCTCGGACGTCAAGCCAGTCAGTCACCGCAACTACCTGGACCCTGAcctggaggccgccatcaatgaAGTGTTAAGCTTCAAACCCATCAAGTTCAAACGCACCAGCTTGGAAGAATCTGAAGTGGAGAAAAATAGGCCAgggggggaggaggaggaggaagaggatgacCGAAAGAGTGTCACCAGCTCCAGGATCGGCAGGGACAGTGGCCGCTCTTCCAGCTTGCGTCGCTCTGCTTCAGCTGTGGACTTCATGCGTTCCAGCAGCAGCCTCAGCACCCGCAGCAGCCGCAGCAAGAAGGGCAAgagcaagaagaagaagaggagaagcCACAGCTCAGAATCAGACAGCTCTGATGATGGCCACAAGAAAAAGAGCTCCAAGAAGAAGAGCAAGAAGTCCAAGAAGAAGTCCAAGAAAGAGTCTTCgtcttcctcctcatcctcagaTTCTGAGTCTAGCACAGAGTCAGACTCCAGTTCAGGAGCGTCCACTATTTCTTACAGAAGCTCCAGCAGTATCAAGAAAGCCCCTGGCAGGCAGGCCTCAGGCTCTGAGGGAGAGCTGGAGCCCGAAGACCCCTCTGAAGGAGCTCCCCCAATGACTaagaaagaggagaagaagagaaagaagaaagtagACAATCTTATGATGAAGTACCTGTACAGGCCTGACAGTGACTAAAGATTGCACCCACCCTCCAGTCGCAGACGCTTCTGCCTTGACAGATCTgacgaggaagaggaagaagaaaaagaggaaggGAGCGCGGGC

Function

NR:

description
PREDICTED: unconventional myosin-XVIIIa-like isoform X1

GO: NA

KEGG:

id description
K10362 MYO18; myosin XVIII

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258318.1 True 8684 mRNA 0.52 55 13604091 13667411

Neighbor

gene id symbol gene type direction distance location
LOC122358501 LOC107690467,LOC107743726,LOC107585604,LOC107664918,LOC107718289 coding upstream 10412 13577002 ~ 13593679 (+)
si:ch1073-145m9.1 si:ch1073-145m9.1,LOC107592629,LOC107690475,LOC107718303,LOC107743751 coding upstream 39369 13560833 ~ 13564722 (+)
ift20 ift20,LOC107743753,LOC107585565,LOC107683839,LOC107601740,LOC107718287 coding upstream 90596 13511197 ~ 13513495 (+)
sae1 sae1,LOC107683835,LOC107585558,LOC107743692,LOC107690439,LOC107718284,LOC107601738 coding upstream 114980 13480966 ~ 13489111 (+)
klc3 klc3,LOC107743695,LOC107601696,LOC107718297,LOC107690445,LOC107683829,LOC107585554,LOC108425834 coding upstream 149526 13445845 ~ 13454565 (+)
LOC122359191 LOC107709114,LOC107677520,LOC107586244 coding downstream 84731 13752142 ~ 13756092 (+)
LOC122358866 cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 coding downstream 107653 13775064 ~ 13796845 (+)
pak4 pak4,LOC107743662,LOC107664940,LOC107585589,LOC107685053,LOC107592622,LOC107744790 coding downstream 295042 13962453 ~ 13975188 (+)
zgc:152863 LOC107743663,LOC107664952,LOC107585590,LOC107592625,LOC107744814,LOC107685175 coding downstream 309433 13976844 ~ 13981992 (+)
npat LOC107743659,LOC107664943,LOC107585592,LOC107744791,LOC107685055,LOC107592638 coding downstream 328315 13995726 ~ 14003601 (+)
G106276 ube4a,LOC107743704,LOC107718272 non-coding upstream 267414 13335308 ~ 13336677 (+)
LOC122358384 NA non-coding upstream 648284 12945077 ~ 12955807 (+)
G106157 LOC107670963,LOC107731150,LOC107586232 non-coding upstream 823716 12773457 ~ 12780375 (+)
G106171 NA non-coding upstream 832021 12771795 ~ 12772070 (+)
G106161 NA non-coding upstream 863014 12738051 ~ 12741077 (+)
G106350 NA non-coding downstream 12769 13680180 ~ 13685449 (+)
G106354 NA non-coding downstream 24968 13692379 ~ 13692893 (+)
G106370 NA non-coding downstream 131890 13799301 ~ 13811099 (+)
G106381 pafah1b1,lis1a,LOC107664934,LOC107743664,LOC107690414,LOC107744786 non-coding downstream 214710 13882121 ~ 13884081 (+)
G106385 NA non-coding downstream 246168 13913579 ~ 13913790 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 755424 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 1506445 12093957 ~ 12097646 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other upstream 1573542 12027555 ~ 12030549 (+)
LOC122358628 NA other upstream 2231400 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 2875696 10721972 ~ 10728395 (+)
G106376 cluh,LOC107685050 other downstream 249162 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 289786 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 1245500 14912911 ~ 14928225 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 2039102 15706513 ~ 15712439 (+)
G107107 NA other downstream 2213703 15881114 ~ 15883510 (+)

Expression


Co-expression Network