cldn15lb (cldn15lb,LOC107577838,LOC107725763,LOC107670109,LOC107689589,LOC107551871,LOC107578549)


Basic Information

Item Value
gene id cldn15lb
gene name cldn15lb,LOC107577838,LOC107725763,LOC107670109,LOC107689589,LOC107551871,LOC107578549
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 23378710 ~ 23385104 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258338.1
GACAGAAGGCCATATCTCTGccctctttttttgtgtttgggAGCGGATTCGATTTTGTTCAGGGTTATTGACCTTAAGCCAATATTAACACAGTGACACTCGTCCATCGCTGCTGTCTTACATATAGACAGAAACCCCGCTCGCAGTCCACGATTTCAGGGGAAACCTAACAAAAGTGTTCTTGATTATCAGGTCACGGTCCGCTGGGATCCAAACAGCACTGACTGCGTGATTTCGAGAACCATTTTCTCACACCGAGGACAGCTGAGGGACTCGCACGCAACTACTGCAGGAGCTTCGAACGTTAAGATCCGCGGGCCCAAAACTTTTTGAATTTGAAGATCGGGGATGGCAGCCATGGTGTTTGAGCTGATGGGAATGTTCCTGGGAATCGTGGGCTGGTGCCTGGAGTCCACCTCCACAAACTCAGCCGTGTGGAAGAAGGCCAGTCACGGAGATGCAGTGGTGACGGCCAGCTCTCAGTTCGAAGGCCTGTGGGTGACGTGTGCGTCTAACTCGCTCGGAGCCGTTCACTGCCAGAGTTTCAAGACCGTTCTGGGCCTTCCAGGATACATCCAGGCCTGTCGAGCCCTGATGATCATCGCTCTCATTCTGGGTCTGCTGGCCGTCGTTCTGGCCTCGATGGGACTCAAGTGCACTAAACTGGGCAGCGCGTCCGAGGAGACGAAGGGCAAGATCAGCCTCACCGCCGGAATCAAGTTCATCCTGTCAGGTCTGTGCGTCATGGTGGCCGTGTCGTGGTACGCCGCTCGAGTCGTTCAGGAGTTCAACGATCCTTTTTACGGAGGGACAAAGTACGAGCTGGGCGCCGGTCTGTATCTGGGATGGGCGGCGGGAGCGCTGGCTATACTGGGCGGAGGAATCCTCTGCACCGCCTTCAAGAGCTCCAGACCTGCTCAGACACGgtctcAAAACTATAACTACAGCTCACAGCCGCAGAAGATCTACAGGCCAGCGCCGACAGAAAACAGCGCCTCTAAAGCTTACGTCTGAGCCTCTTTTTGTAGATGCACGTGTGTATTTTTCTGTCGTGTTCGCATTTTAGAAGTCGAGCGATCGGGCTTTTTTCATTTCGGCTGGTTGCAAAGGCAATGtctcttattttcatttaggtTACCTCGGTGTACTTAACTAAGacgaaaactgtaataaaatgtgaGCAACTGACAAAAAGACACAAcagaattgaaataaaatgaaaactgtaatagtatcttaataatattgctttaaacCATCACTTAAATCCCCTATTCTGTACATTTGGTTCTCATTAATCTCTCTTTTTCAATTAACATTTATGTCATGtaaatttttgttatataaatgttacatgGTCTGTTCTATTGTTTGGAAAAGCTTATTGTTTTCTGAAattgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaacattgCTGTGAAGTTTTTGCaaacagtttctttttaaatgttttacttatCAGACCTTGGATTGGATATGACAATAAagatttataaaacaaaa
>XM_043258339.1
GGACAGAAGGCCATATCTCTGccctctttttttgtgtttgggAGCGGATTCGATTTTGTTCAGGGTTATTGACCTTAAGCCAATATTAACACAGTGACACTCGTCCATCGCTGCTGTCTTACATATAGACAGAAACCCCGCTCGCAGTCCACGATTTCAGGGGAAACCTAACAAAAGTGTTCTTGATTATCAGGTCACGGTCCGCTGGGATCCAAACAGGATGGCAGCCATGGTGTTTGAGCTGATGGGAATGTTCCTGGGAATCGTGGGCTGGTGCCTGGAGTCCACCTCCACAAACTCAGCCGTGTGGAAGAAGGCCAGTCACGGAGATGCAGTGGTGACGGCCAGCTCTCAGTTCGAAGGCCTGTGGGTGACGTGTGCGTCTAACTCGCTCGGAGCCGTTCACTGCCAGAGTTTCAAGACCGTTCTGGGCCTTCCAGGATACATCCAGGCCTGTCGAGCCCTGATGATCATCGCTCTCATTCTGGGTCTGCTGGCCGTCGTTCTGGCCTCGATGGGACTCAAGTGCACTAAACTGGGCAGCGCGTCCGAGGAGACGAAGGGCAAGATCAGCCTCACCGCCGGAATCAAGTTCATCCTGTCAGGTCTGTGCGTCATGGTGGCCGTGTCGTGGTACGCCGCTCGAGTCGTTCAGGAGTTCAACGATCCTTTTTACGGAGGGACAAAGTACGAGCTGGGCGCCGGTCTGTATCTGGGATGGGCGGCGGGAGCGCTGGCTATACTGGGCGGAGGAATCCTCTGCACCGCCTTCAAGAGCTCCAGACCTGCTCAGACACGgtctcAAAACTATAACTACAGCTCACAGCCGCAGAAGATCTACAGGCCAGCGCCGACAGAAAACAGCGCCTCTAAAGCTTACGTCTGAGCCTCTTTTTGTAGATGCACGTGTGTATTTTTCTGTCGTGTTCGCATTTTAGAAGTCGAGCGATCGGGCTTTTTTCATTTCGGCTGGTTGCAAAGGCAATGtctcttattttcatttaggtTACCTCGGTGTACTTAACTAAGacgaaaactgtaataaaatgtgaGCAACTGACAAAAAGACACAAcagaattgaaataaaatgaaaactgtaatagtatcttaataatattgctttaaacCATCACTTAAATCCCCTATTCTGTACATTTGGTTCTCATTAATCTCTCTTTTTCAATTAACATTTATGTCATGtaaatttttgttatataaatgttacatgGTCTGTTCTATTGTTTGGAAAAGCTTATTGTTTTCTGAAattgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaacattgCTGTGAAGTTTTTGCaaacagtttctttttaaatgttttacttatCAGACCTTGGATTGGATATGACAATAAagatttataaaacaaaa
>XM_043258340.1
CCCTCCACGTGGCCTCCATTACGTCACACTGCTGCCCGGTTTCAGTGATACAGTATCGTGAGCGTTTTACTGGACGGCTGTGGCTCAATCCTGTGACAAAACCGGGTTAAACCAGTCATAAAAACTCATAAAACACACCTTTACTCTAGAATACGGCGCGGTTTTCTGCAGATGTGTCTCAGAAGTATTGCTGTTTAACTCTTGGGCGGAATTTAGAGTTCAGGAAAAcgattattttgatttatgtgTTCAGGGCTACGACACATCGGTAATTTTGTCGCGTTCGCAAGTTGAAGCGTCCGCAGTAACCGAGCTAGTTTTGAGTAGCAATCGGGTGGGTTTTGTTGTgtaaacctggcaaccctgccgTTTCGTTTTACCATTTAGTTTCTAAAGCCGCATACACCTCGACCCCAgcgttacattattataaaggtCAAGGTTTTTAGAGGCTATTATGAGGTCAAACTCAAACTTTTCTCCATTGGGTCACATGACACTTCCTGTATTGACTTCCATGGCGTTATCTAGTGAAAGCCACACAGGAGGGACCagagtttattgttttatggCTCTTGAATCTATAACACACCGACAGTCGAACACGCTCCCATCCTGGTCCGGCGCTCGGTGCGGTGCGGATTGAATTGGGAGTATTTGTGTGGAGTTGGTGAATCATGTCGACGGGGGTCCAGCTGCTGGGGTTTCTGATGTGTTTGGGAGGCTGGCTGCTCTCCTTCATGTCGCTGCTGAATGAATCGTGGCGCACGTCGACGTTTGCGAATGAGCTGATCACGTCGGTGTGGTATTATCAGAACCTGTGGCAGTCGTGTTCGGAGGCTAGCACCGGGATCACAAACTGCAAGCAGTTTGAGTCCATGCTCTCTCTTTCCGGATACATCCAGGCCTGTCGAGCCCTGATGATCATCGCTCTCATTCTGGGTCTGCTGGCCGTCGTTCTGGCCTCGATGGGACTCAAGTGCACTAAACTGGGCAGCGCGTCCGAGGAGACGAAGGGCAAGATCAGCCTCACCGCCGGAATCAAGTTCATCCTGTCAGGTCTGTGCGTCATGGTGGCCGTGTCGTGGTACGCCGCTCGAGTCGTTCAGGAGTTCAACGATCCTTTTTACGGAGGGACAAAGTACGAGCTGGGCGCCGGTCTGTATCTGGGATGGGCGGCGGGAGCGCTGGCTATACTGGGCGGAGGAATCCTCTGCACCGCCTTCAAGAGCTCCAGACCTGCTCAGACACGgtctcAAAACTATAACTACAGCTCACAGCCGCAGAAGATCTACAGGCCAGCGCCGACAGAAAACAGCGCCTCTAAAGCTTACGTCTGAGCCTCTTTTTGTAGATGCACGTGTGTATTTTTCTGTCGTGTTCGCATTTTAGAAGTCGAGCGATCGGGCTTTTTTCATTTCGGCTGGTTGCAAAGGCAATGtctcttattttcatttaggtTACCTCGGTGTACTTAACTAAGacgaaaactgtaataaaatgtgaGCAACTGACAAAAAGACACAAcagaattgaaataaaatgaaaactgtaatagtatcttaataatattgctttaaacCATCACTTAAATCCCCTATTCTGTACATTTGGTTCTCATTAATCTCTCTTTTTCAATTAACATTTATGTCATGtaaatttttgttatataaatgttacatgGTCTGTTCTATTGTTTGGAAAAGCTTATTGTTTTCTGAAattgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaacattgCTGTGAAGTTTTTGCaaacagtttctttttaaatgttttacttatCAGACCTTGGATTGGATATGACAATAAagatttataaaacaaaa
>XM_043258341.1
gctttttttcgGCCTGGATTGGTATTTTTCCCTGTTTCCCAACGAGGACGCATTGATCGAAACTGACCGTCAACGCAGGCAGTGAACTTGTACTTTAAGAAAAAGAGGCCGTTCTGTTTAAAGAATCGTATCCGCCGTTTGTTGAGCAAACCAGCATTTCAGAATGATTTCATGCCACCCTGAAGACTAGCAATGATGCTTTGATCGTGGAAATAGATGACAGAAAACGGTTATTTTGGATTGAGagtaatatttcacttttggtcaaataaatgctgtctgCGGGTGTTTCAAAAGCAGCATGTTTGCCCTCACGTTGTGTGTTACGGTGTAATCGTTGTCCTGGGGAGTGTGTGAAACAGACGGATGACCCTGACCCGAGAGATGAGTCTCATCTGGACAGAAGGCCATATCTCTGccctctttttttgtgtttgggAGCGGATTCGATTTTGTTCAGGGTTATTGACCTTAAGCCAATATTAACACAGTGACACTCGTCCATCGCTGCTGTCTTACATATAGACAGAAACCCCGCTCGCAGTCCACGATTTCAGGGGAAACCTAACAAAAGTGTTCTTGATTATCAGGTCACGGTCCGCTGGGATCCAAACAGCACTGACTGCGTGATTTCGAGAACCATTTTCTCACACCGAGGACAGCTGAGGGACTCGCACGCAACTACTGCAGGAGCTTCGAACGTTAAGATCCGCGGGCCCAAAACTTTTTGAATTTGAAGATCGGGGATGGCAGCCATGGTGTTTGAGCTGATGGGAATGTTCCTGGGAATCGTGGGCTGGTGCCTGGAGTCCACCTCCACAAACTCAGCCGTGTGGAAGAAGGCCAGTCACGGAGATGCAGTGGTGACGGCCAGCTCTCAGTTCGAAGGCCTGTGGGTGACGTGTGCGTCTAACTCGCTCGGAGCCGTTCACTGCCAGAGTTTCAAGACCGTTCTGGGCCTTCCAGGATACATCCAGGCCTGTCGAGCCCTGATGATCATCGCTCTCATTCTGGGTCTGCTGGCCGTCGTTCTGGCCTCGATGGGACTCAAGTGCACTAAACTGGGCAGCGCGTCCGAGGAGACGAAGGGCAAGATCAGCCTCACCGCCGGAATCAAGTTCATCCTGTCAGGTCTGTGCGTCATGGTGGCCGTGTCGTGGTACGCCGCTCGAGTCGTTCAGGAGTTCAACGATCCTTTTTACGGAGGGACAAAgtctcAAAACTATAACTACAGCTCACAGCCGCAGAAGATCTACAGGCCAGCGCCGACAGAAAACAGCGCCTCTAAAGCTTACGTCTGAGCCTCTTTTTGTAGATGCACGTGTGTATTTTTCTGTCGTGTTCGCATTTTAGAAGTCGAGCGATCGGGCTTTTTTCATTTCGGCTGGTTGCAAAGGCAATGtctcttattttcatttaggtTACCTCGGTGTACTTAACTAAGacgaaaactgtaataaaatgtgaGCAACTGACAAAAAGACACAAcagaattgaaataaaatgaaaactgtaatagtatcttaataatattgctttaaacCATCACTTAAATCCCCTATTCTGTACATTTGGTTCTCATTAATCTCTCTTTTTCAATTAACATTTATGTCATGtaaatttttgttatataaatgttacatgGTCTGTTCTATTGTTTGGAAAAGCTTATTGTTTTCTGAAattgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaacattgCTGTGAAGTTTTTGCaaacagtttctttttaaatgttttacttatCAGACCTTGGATTGGATATGACAATAAagatttataaaacaaaa

Function

symbol description
cldn15lb Predicted to enable structural molecule activity. Acts upstream of or within intrahepatic bile duct development. Located in bicellular tight junction. Is expressed in gut; head; liver; pancreas; and pectoral fin.

NR:

description
claudin-19-like isoform X3

GO:

id name namespace
GO:0035622 intrahepatic bile duct development biological_process
GO:0005886 plasma membrane cellular_component
GO:0005923 bicellular tight junction cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258338.1 False 1550 mRNA 0.47 7 23379108 23385104
XM_043258339.1 False 1422 mRNA 0.47 6 23379107 23385104
XM_043258340.1 True 1876 mRNA 0.46 5 23381091 23385104
XM_043258341.1 False 1837 mRNA 0.45 6 23378710 23385104

Neighbor

gene id symbol gene type direction distance location
LOC122358508 parl,LOC107670111,LOC107689587,LOC107725764 coding upstream 441 23372660 ~ 23378269 (+)
fzd4 fzd4,LOC107600811,LOC107551868,LOC107725773 coding upstream 116520 23257750 ~ 23262190 (+)
pdgfd LOC107689581,LOC107670136,LOC107756229,LOC107725770 coding upstream 264532 23090925 ~ 23114178 (+)
gucy1a2 gucy1a2,LOC107566890,LOC107706059,LOC107669873,LOC107725744 coding upstream 440778 22908551 ~ 22937932 (+)
cwf19l2 cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834 coding upstream 481036 22877852 ~ 22897674 (+)
LOC122359600 NA coding downstream 7651 23392755 ~ 23393038 (+)
LOC122359596 NA coding downstream 8753 23393857 ~ 23394137 (+)
LOC122359602 NA coding downstream 10380 23395484 ~ 23395751 (+)
LOC122358723 NA coding downstream 221663 23606767 ~ 23607600 (+)
LOC122358724 NA coding downstream 224182 23609286 ~ 23610125 (+)
G109161 NA non-coding upstream 3757 23353307 ~ 23374953 (+)
G109131 NA non-coding upstream 58084 23317182 ~ 23320626 (+)
G109130 NA non-coding upstream 134940 23243545 ~ 23243770 (+)
G109048 NA non-coding upstream 173206 23205260 ~ 23205504 (+)
G109047 NA non-coding upstream 174987 23203472 ~ 23203723 (+)
G109132 NA other upstream 107419 23246775 ~ 23271291 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other upstream 419031 22955711 ~ 22959679 (+)
G108990 NA other upstream 425197 22949140 ~ 22953513 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 600985 22775649 ~ 22777725 (+)
G108573 NA other upstream 1641023 21736680 ~ 21737687 (+)
G109193 NA other downstream 124328 23509432 ~ 23510315 (+)

Expression


Co-expression Network