LOC122358640 (cryba1b,LOC107581934,LOC107731981,LOC107713158,LOC107587221,LOC107704801,LOC107675182)


Basic Information

Item Value
gene id LOC122358640
gene name cryba1b,LOC107581934,LOC107731981,LOC107713158,LOC107587221,LOC107704801,LOC107675182
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15644563 ~ 15647849 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258517.1
ATGAGAGATGGTCGTACGGCTGCCATGCAGCTCCATGGCCGCTCATTGGTGGAGATCACTTCATTGTCAGTCAGCGCTGAGATATTTGAAACAATGGCTCTGACAAACCCTATGTCAATGCCCATGGGACCATGGAAGattaCCGTTTACGATCAGGAGCATTTCCAGGGCAGGCGTTGTGAATTCACCTCCTGCTGCCAGAACATCATGGAGTACGGGATGGAGACTGTCCGTTCCCTGAAGGTGGAGTGTGGAGTCTGGGTAGGTTTTGAGCACTCTACCTTCAATGGCCAGCAGTTCATCCTGGAGAAGGGAGATTACCCTTGCTGGGAGGCCTGGAGTGGCAACAATGCCTATCGCATTGAGAGGATGATGTCCTTCCGCCCCATCTATTCTGCTATGCACAGTGATTGCCGTATGATGCTTTTCGAGTGTGAGAACATGACTGGAAGGCAGTGGGAGGTGTGCAATGACTACCCCTCCCTGCAGGCTATGGGATGGTGCAACAACGAGGTCGGCTCCATCCAAGTCATGAGTGGCGCCTGGGTATGCTACCAGTATCCTGGTTACCGTGGTTACCAGTACATTATGGAGTGCGACTGCCACGGAGGCGAGTACAGGCACTACAGGGAGTACGGCTGCCACGCTCAGACCCCTCAGATCCAGTCTATCCGTAGGATCCAGCACTGAGAGGAGCCAGCCGTGTCCTTCCTCCCTTCCCTCCCTTCTTCCTCCTTCTGAGCCCTTCAAACTTCCACTTCCTCCATCCCTCTGTTCCCAGCCTTGCAAGATGGTTTGTCGACCCGGGCGGCAGGCTGGTATACTGGTGCTACACTATAATGTAACAAGTCCACAGCACGTTTTTTACCCACTGCATGaggaaagaaagacaaactATTGACGGCAGGAACGATGAGAAGATAAAGTCCTGTATGATGACAGCAGAACGGACGTGGTGCGGTGAGAAGCCGGGAGCGTTGCTCTTCTTTCGTCATGACTCGATCATCATGATCATAGCCGTTGCAGTTTCCATGGTCAACTTCTGTATGATATTTCATGAATAAAGAACATGAGCATAAAagctaaagaaacaaaaaaaacagaataattgATATCAGCTGACTGTGGCGTGTGGATCTTTATGAccttaaatgaacattaaa

Function

symbol description
cryba1b Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens and solid lens vesicle. Human ortholog(s) of this gene implicated in cataract and cataract 10 multiple types. Orthologous to human CRYBA1 (crystallin beta A1).

NR:

description
PREDICTED: beta-crystallin A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258517.1 True 1163 mRNA 0.50 6 15644563 15647849

Neighbor

gene id symbol gene type direction distance location
LOC122359367 LOC107669715,LOC107548559,LOC107743735,LOC107757374,LOC107685158,LOC107589739 coding upstream 7683 15624216 ~ 15636880 (+)
nova2 nova2,LOC107669728,LOC107589717,LOC107685091,LOC107756760,LOC107548550,LOC103039352,LOC108440380,LOC108277822,LOC104927796,LOC100701682 coding upstream 77014 15516104 ~ 15567549 (+)
ankrd13b ankrd13b,LOC107743633,LOC107548583,LOC107669714,LOC107756832,LOC107589713,LOC107685087 coding upstream 197090 15424339 ~ 15447473 (+)
pitpnaa pitpna,LOC107743636,LOC107669737,LOC107548584,LOC107685084,LOC107756865 coding upstream 242610 15395001 ~ 15401953 (+)
slc43a2a slc43a2,LOC107548581,LOC107685082,LOC107589710,LOC107669718 coding upstream 250474 15374883 ~ 15394089 (+)
LOC122358489 LOC107756729,LOC107589721,LOC107685095 coding downstream 11139 15658988 ~ 15661655 (+)
gipr gipr,LOC107548593,LOC107714193,LOC107685094,LOC107756746 coding downstream 152880 15800729 ~ 15819146 (+)
clip3 clip3,LOC107685098,LOC107714192,LOC107548591,LOC107669746 coding downstream 178312 15826161 ~ 15837908 (+)
si:ch211-137a8.2 LOC107714189,LOC107669729,LOC107548595 coding downstream 197725 15845574 ~ 15865410 (+)
si:ch211-137a8.4 si:ch211-137a8.4,LOC107669730,LOC107714190,LOC107548596,LOC107756666,LOC107682371,LOC107589723 coding downstream 224232 15872081 ~ 15877855 (+)
G106941 NA non-coding upstream 6534 15637174 ~ 15638029 (+)
G106924 NA non-coding upstream 73401 15502558 ~ 15571162 (+)
G106926 NA non-coding upstream 133453 15510317 ~ 15511110 (+)
G106898 NA non-coding upstream 161891 15397722 ~ 15482672 (+)
G106873 sarm1,LOC107548548,LOC107669752,LOC107743642,LOC107685076,LOC107756984 non-coding upstream 353400 15290829 ~ 15291163 (+)
G107113 NA non-coding downstream 246284 15894133 ~ 15894624 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding downstream 352366 16000215 ~ 16002131 (+)
G107141 NA non-coding downstream 421635 16069484 ~ 16069741 (+)
G107145 NA non-coding downstream 491964 16139813 ~ 16167005 (+)
LOC122358549 NA non-coding downstream 688965 16336814 ~ 16357622 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other upstream 716338 14912911 ~ 14928225 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other upstream 1682756 13957197 ~ 13961807 (+)
G106376 cluh,LOC107685050 other upstream 1727301 13916573 ~ 13917262 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 2795896 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 3546917 12093957 ~ 12097646 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 58664 15706513 ~ 15712439 (+)
G107107 NA other downstream 233265 15881114 ~ 15883510 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other downstream 357020 16004869 ~ 16043265 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other downstream 441908 16089757 ~ 16236341 (+)
lyrm9 lyrm9,LOC107756492 other downstream 865459 16513308 ~ 16514221 (+)

Expression


Co-expression Network