LOC122358712


Basic Information

Item Value
gene id LOC122358712
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22839191 ~ 22852649 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258553.1
ACAGCCAATCAAATCACAGCTAAATGAAATCGGAGTCGTTTTGCTCCAGATTCCTGTTGAAGTTAATGTGCGTTAATGACTAAAAGTAAGCGTTCGTGCATCTTGAGCAGTGTTGTTAACGTTGATTCACATTGTTTGTTGAGTTACGTATATAAAAGACGCTCGGAAACCCGCGACCCTGCGCAAACGATTGTTTATGTAAACACAAGCGCTGTTTAGCACATGCACtgtattgccaaaagtattcgctcacccatccaaataatcagaTGGTCGTCTAATCGCGGCCGCAGGTGTATAAAGTCAAGCACCTGGGCACGCAGACTGTTTTTTACAGACATTTGTGAAGGAATGGGTCGCTCTCTCAGTGAGTTCCAGcgtggaactgtgataggatgccacctgtgcaacaaatccagtcgtgaaatttcctcgctcctaaatattccacagtcgACTGTCAGCTATATCGTAAGGAAGTGGAAGCGTTTGGGAACGACGGCGACTCAGCCGCGGAGTGGTAGGCCCCGTAAACTGACGGAGCGGGGTCAGCGGATGCTGAGGCGCACGGTCCGCAGTGGCCGccaactttctgcagagtcGCTCGCTACAGACCTCCGGACCTCATGCGGCCTTCAGGTCAGCTCAAGAACAATGCGCAGAGAGCTCCGTGGAATGATGGGTTCTCGTGCATCCAAGCCATGCGTCGACGCGAGGCGTcggatgcagtggtgtaaagcgcGCCGCCACTGGACTCTGGAGCGGTGGAGACGCGTTCTCTGGAGTGACCAGTCGCGCTTCTCCATCTGGAGGTCGGGCGGAGGAGTCTGGGTTAGACGGTTGCCGGGACGACAGTGCTCCTCTGACTGCATCGTGCCAAGTGTGAAGTTCGGTGGAGGGGGGgttatggtgtggggttgtttttcaggagctgggctcGGCCCTTTAGTTCCGGTGAAAGGAAGTCCGAATGCTTCGGcgtaccaagacattttggacaattacATGCTGCCgactttgtgggaacagttcgGAGCCGGgcccttcctcttccaacatgaccGCGCgccagtgcacaaagcaaggtccgTAAAGACGTGGATGACAGAGTCCGGCGTGGATGAACTCGACTGGCCCGCGCCGAGTCCTGATCTCAACCCCATAGAACagctttgggatgaattagagcggaggctgagagccaggccttctcgtcCAACGTCGGCGTGCGACCTCATGAACGCGCTTCTGGAAGAGTGGTCAAAAATTCCCGCAAACGCACTCCTgaaccttgtggacagccttcccagaagagttgaagctgttatagctgcaaaggGTACAGACGCTGAAGAGGAGATCGACAGCATGAGTGAACCAGAACCATCcagaataaaacatgaagatACTGAGGAACGAACAGacGGGATATCAGTAAAACAGCAAAGACATGAAGTGGAGGAACAACATTGTAAAATCAAACCTTCAAGAAAAAATGCCAAACAGCTGCACACCTGTTttcagtgcggaaagagttttGCCGCGCCATCGAGTCTCAGAAATCATCTGCTCATTCACTCCGGAGAAAAGCCATCGTCACAACTGAAAAAACAACTGATGCCTCACGTGTGTCCTTACTGTGGAAAGAGATTCTCGTGGATGTCCAGTTATAAAAAGCACCAGAAAATACACGATGAAGTGAGAGATCATGTGTGTCGTGAGTGCGGGAAGGGCTTCACTAGATCGGACTGTCTGAAGCAGCAccagaggatccacaccggagaaaGACCGTACAAGTGCTCGTACTGCGAGAAGAGCTTCACTCAGCCTGGAAGCCTGAAAAAGCACGAGAGACTTCACACCGGGGAGAAGCCGTATCGCTGCgctcagtgcgggaagagctttaAAGACGCGTCGACTCTCAGCTATCACCTGCTCAGTCACTCCGGAGAAAAGCCGTTCAGCTGCGACCGGTGCGGGAAAAAGTTCATCTCATCATCACATCTAAAAAGTCACCTGACCGTTCATTCGGACGAGAAGCCTCACGTGTGCTCTTACTGCGGAAAGAGCTTTTCGAGGCTAATTGCTTGTAAACAGcaccagaaaacacacaccGAAGCGAGAGATCACTTGTGCTGCGAGTGCGGGAAGAGATTTACTGCAGCTGGTGATCTGAAGCGGCACctgaggatccacaccggagaaaaACCTCACAAGTGCTCGTACTGCGACAGGAGCTTCAGTGTGTCTGGAAAACTGAAGGACCACGAgagagttcacaccggagagaaagtGCGGAGAGAGAGTCACTGCTTGGCTGAAGTAAAACAGGAAAGAATGAAGCTGAAAGAAGAGGAGGGGTGTGGAAAAAGCAAAACGTCAAGAAAAAATAATTCCGAACAGCTGAAAACGCACGAGAGAAAACGCGCGCACGTTCCCGCCGGAGAGAAGCGGTATCGCTGCGCTCAGTGCGGAAAGAGTCTTTCCGGAGCGTCGAGTCTCAGGAATCACCTGCTCATTCACTCCGGAGAAAAGCCGTTCGGCTGCGACCGGTGCGGGAAAAAGTTCATCTCGTCGTCGCACCTGAAAAGTCACATGACCGTTCATTCGGACGAGAAGCCTCACGTGTGCTCTTACTGCGGAAAGAGCTTTTCGTGGCTGGCCAGTTACAAACATCATCAGAAGACGCACAGTAAAGTGAAAGACCACGTGTGCCGcgagtgcgggaagagcttcactAGAATAGCCAATCTGAAGCAGCACCAGAGGATACACACCGGAGAGAGGCCTTACAAGTGCTCGTACTGCGACAGGAGCTTCAATGAGTCTGGAAACCTGAAAAGGCATCAGCgcgttcacaccggagagaagccgtacTACTGCACTCAGTGCGGGAAGTGTTTCACTCAGTCGCCAAATCTAGTGATTCATATTAAAAAGTGCATTGAAAAGTTCACGGTAAAGAGGCGCAAGATGGCAGACTCGGCTGGAGTAAAGCGGCACAGGTTGAAGGTCAAAGAAGAAGAGGAGTTTTGCAAACTCAAAACCTCAAGAAGAAAAGCCGAACGCACCTGCCCTCGGCGCGGAAAGAGCTTCGAGTATCACATGCACGGAGAAGACCCCTTTGGCAAGTTTCGCGCGACGTCCAGTTCAAGGAAGCGCCAGAAAGCGCGCTCGGACGAGAAGCCTTACCTGTGCTCTTTCTGCGGAAAGGGCTTTTCGGAGGCGCTCAGCTGTAAAAAGCACCAGAAACGGCACGACGCGGTGCGGGGTCACGTGTGCCGcgagtgcgggaagagcttcaccaCGGCCGCCTACCTGAAATACCACCTTAGGATACACACCGGGGAAAAACCGTACAAGTGCTCGTACTGCGACAGGAGCTTCACCGCGTCCGGCACCGTGAGGATGCACGAGAGAGTGCACACCGGGGAGAAGCCGCACCGCTGCgctcagtgcgggaagagcttcaggGACGCGTCGAGTCTCAAAAGCCACCTGCACGTCCATTCCGGCGAGAAACCGTTCGGCTGCGGCCAGTGCGGGAAAAAGTACGGCTCGCCGTCGAGCCTGCGAACGCACCTGGCCGTGCACTCGGACGAGAGGCCTCACGTGTGTCCGTTCTGCGGAAAGAGCTTCTCTCGACTGACCGTCTGCAAGCAGCACCAGAAAACGCACGGCGCGGCGAGAGAGCACGTGTGCTGCGAGTGCGGGAAGGGCTTTACTAAAGCCGACCACCTGAAGCGGCACCGAATGATCCACACCGGGGAAAAGCCTCACAAGTGCTCGTACTGCGACAAGAGCTTCGCTCAGTCCGTGAGCCTGAAAGCGCACGAGAGggtccacaccggagagaagccgtacCGCTGCGCCCGGTGCGGGAAGACTTTCACTCAGTCCTCGAGCCTCCTGACTCACGCGAGAAAGCATTGCAAATGAGCGGCGTGCGTTTTAAAGCGTAGACTGTCCTTGTGCAAATTGACTTTTGGGTGCCGAGTGTCTATTTATGTGCGTGCCGTTAATTAATGCGAAATAAAATCCGAAACACGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258553.1 True 4050 mRNA 0.53 5 22839191 22852649

Neighbor

gene id symbol gene type direction distance location
LOC122359067 NA coding upstream 1672 22835659 ~ 22837519 (+)
LOC122358711 NA coding upstream 4404 22824063 ~ 22834787 (+)
LOC122359066 NA coding upstream 9262 22827350 ~ 22829929 (+)
lrrc51 LOC107706076,LOC107558849,LOC107670099,LOC107669906 coding upstream 25921 22808780 ~ 22813270 (+)
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding upstream 74229 22751534 ~ 22764962 (+)
LOC122359065 NA coding downstream 609 22853258 ~ 22856816 (+)
LOC122358713 NA coding downstream 3828 22856477 ~ 22857439 (+)
cwf19l2 cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834 coding downstream 25203 22877852 ~ 22897674 (+)
gucy1a2 gucy1a2,LOC107566890,LOC107706059,LOC107669873,LOC107725744 coding downstream 55902 22908551 ~ 22937932 (+)
pdgfd LOC107689581,LOC107670136,LOC107756229,LOC107725770 coding downstream 238276 23090925 ~ 23114178 (+)
G108981 NA non-coding upstream 1069 22837685 ~ 22838122 (+)
G108949 NA non-coding upstream 63618 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 172898 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 190846 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding upstream 210079 22619676 ~ 22629112 (+)
G108986 gria4a non-coding downstream 16926 22869575 ~ 22988641 (+)
G109006 LOC104959606 non-coding downstream 145881 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 188421 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 258907 23111556 ~ 23113058 (+)
G109018 NA non-coding downstream 264180 23116829 ~ 23117749 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 61466 22775649 ~ 22777725 (+)
G108573 NA other upstream 1101504 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1103473 21735014 ~ 21735718 (+)
G108571 NA other upstream 1106084 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1112925 21724404 ~ 21726266 (+)
G108990 NA other downstream 96491 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 103062 22955711 ~ 22959679 (+)
G109132 NA other downstream 394126 23246775 ~ 23271291 (+)
G109193 NA other downstream 656783 23509432 ~ 23510315 (+)

Expression


Co-expression Network