zgc:101731 (zgc:101731,LOC107587749,LOC107669759,LOC107757427,LOC107714187,LOC107683430,LOC108425805)


Basic Information

Item Value
gene id zgc:101731
gene name zgc:101731,LOC107587749,LOC107669759,LOC107757427,LOC107714187,LOC107683430,LOC108425805
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15893397 ~ 15900634 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258632.1
AACCAATCGGCTACATGAAGGGGCGTGGCCTGAGTTACCTGTGATGAAGACAACTGCCTGCTCGCGCTGAGTAGATGATGTGAAATCAGATCGATGAGCAAACAGGTGTTGAACAGAACGGCTTTGTCTTTGCGCCTTCCTCTGGAAAAATAACGCTTAAGCGTGTACCTGCTGTCATACAACCAATTATTGCTGTCAATCTGAGGCATGCTGAGCTTATAAAGCCTTTGCTCTAAGAATAACCGCGTCCCTCGACCTGTCCTCCCCCCCGCTGCACTTCTCAGCTAGGATGGCTGCCGACTCCACCATGAGATCTGAAgtggaggagctgcagaggaGGGCCAATCAGGTGACAGATGAGtcCCTTGAGATTACTAGAAACATGAGGCTCCTGTTGGAGGAGAGTAAAGATGCAGGGATCAGGACACTTGTTATGCTGGACGAGCAGGGAGAACAACTGGACCGCATAGAAGAGGGCCTGGATCAGATCAACAAGGACATGAAGGAGGCTGAGAAAAATCTCACTGACATGGCCAGGTGTTGCGGTCTGTGCATCTGGCCATGTACAAAACTGAAGGACTTTGAAGCAAGTGGGGCATATAAGAAGGTTTGGGGTAATAATCAAGATGGGGTGGTGTCCAGCCAGCCTTCTTCTCGAGTCGTGGATGAGAGGGAGAAGATGACCATGAGCGGTGGATATATTAGAAGAGTGACAAACGATGCTAGGGAGGATGAAATGGAGGAAAACTTGGCACAGGTTGGCAGTATCCTTGGCAACCTCAGAAGCATGGCACTTGACATGGGCAATGAAATCGACACTCAGAACGTCCAGATTGAACGCATTCAGAGCAAGgCCATGGTTAACGAATCCCGCATCAATGAGGCCAATCAGAGGGCCACAAAGCTAATATCAAGATAAAAACATTGGATTTTCCTTTGTGAAACGTTTACTGTCTTCTGTAGGAAAGTGTGTGCGCATTGATACAAATTaagttttatcttttaaatgacTATTTACAAAACTTGGATTATTGCCTATATGAGAGTAAGTTATGTTTCAACAACAGCTCTtcaatacaagaaaaaaatgaatgttaatagTCTGTgctgtaattgtaatttaagcATGTATTGTACAGTATAGGctacaaaaaaacatcttttagactatcttagtttttttttaagcctgcAGAACACTTTCCATGGCCGATAACAGCTCACTATTCAGACAAAGCAGTGTCTTAAAGTTGTATTGGTAAATGTAACATCTTTGTCTACCTGagtagctttttaaaaaataaatccaatttTAAAGTTCAAGGGTTCGTTCCCATGAtgaacaaaatgctttttttccctgcTATACACGGACCACTGGGTTCTACAaataatctttctttttattttaaaactaaaactatatattttttgtcattctgtGGAGCTGGCAACCTAAACGCCGTCttgattgtcttttttttcttttatgaaataaaactgaaggTTACTCGGTGTGGGACGTTTTATCAACTAACTAAACCAAAGTCAGCCAATTGTGAGTTTAAACGCACGAAGTTGAATAAATTAGAGTTTTAA
>XM_043258633.1
AACCAATCGGCTACATGAAGGGGCGTGGCCTGAGTTACCTGTGATGAAGACAACTGCCTGCTCGCGCTGAGTAGATGATGTGAAATCAGATCGATGAGCAAACAGGTGTTGAACAGAACGGCTTTGTCTTTGCGCCTTCCTCTGGAAAAATAACGCTTAAGCGTGTACCTGCTGTCATACACTAGGATGGCTGCCGACTCCACCATGAGATCTGAAgtggaggagctgcagaggaGGGCCAATCAGGTGACAGATGAGtcCCTTGAGATTACTAGAAACATGAGGCTCCTGTTGGAGGAGAGTAAAGATGCAGGGATCAGGACACTTGTTATGCTGGACGAGCAGGGAGAACAACTGGACCGCATAGAAGAGGGCCTGGATCAGATCAACAAGGACATGAAGGAGGCTGAGAAAAATCTCACTGACATGGCCAGGTGTTGCGGTCTGTGCATCTGGCCATGTACAAAACTGAAGGACTTTGAAGCAAGTGGGGCATATAAGAAGGTTTGGGGTAATAATCAAGATGGGGTGGTGTCCAGCCAGCCTTCTTCTCGAGTCGTGGATGAGAGGGAGAAGATGACCATGAGCGGTGGATATATTAGAAGAGTGACAAACGATGCTAGGGAGGATGAAATGGAGGAAAACTTGGCACAGGTTGGCAGTATCCTTGGCAACCTCAGAAGCATGGCACTTGACATGGGCAATGAAATCGACACTCAGAACGTCCAGATTGAACGCATTCAGAGCAAGgCCATGGTTAACGAATCCCGCATCAATGAGGCCAATCAGAGGGCCACAAAGCTAATATCAAGATAAAAACATTGGATTTTCCTTTGTGAAACGTTTACTGTCTTCTGTAGGAAAGTGTGTGCGCATTGATACAAATTaagttttatcttttaaatgacTATTTACAAAACTTGGATTATTGCCTATATGAGAGTAAGTTATGTTTCAACAACAGCTCTtcaatacaagaaaaaaatgaatgttaatagTCTGTgctgtaattgtaatttaagcATGTATTGTACAGTATAGGctacaaaaaaacatcttttagactatcttagtttttttttaagcctgcAGAACACTTTCCATGGCCGATAACAGCTCACTATTCAGACAAAGCAGTGTCTTAAAGTTGTATTGGTAAATGTAACATCTTTGTCTACCTGagtagctttttaaaaaataaatccaatttTAAAGTTCAAGGGTTCGTTCCCATGAtgaacaaaatgctttttttccctgcTATACACGGACCACTGGGTTCTACAaataatctttctttttattttaaaactaaaactatatattttttgtcattctgtGGAGCTGGCAACCTAAACGCCGTCttgattgtcttttttttcttttatgaaataaaactgaaggTTACTCGGTGTGGGACGTTTTATCAACTAACTAAACCAAAGTCAGCCAATTGTGAGTTTAAACGCACGAAGTTGAATAAATTAGAGTTTTAATTT
>XM_043258634.1
AACCAATCGGCTACATGAAGGGGCGTGGCCTGAGTTACCTGTGATGAAGACAACTGCCTGCTCGCGCTGAGTAGATGATGTGAAATCAGATCGATGAGCAAACAGGTGTTGAACAGAACGGCTTTGTCTTTGCGCCTTCCTCTGGAAAAATAACGCTTAAGCGTGTACCTGCTGTCATACAACCAATTATTGCTGTCAATCTGAGGCATGCTGAGCTTATAAAGCCTTTGCTCTAAGAATAACCGCGTCCCTCGACCTGTCCTCCCCCCCGCTGCACTTCTCAGCTAGGATGGCTGCCGACTCCACCATGAGATCTGAAgtggaggagctgcagaggaGGGCCAATCAGGTGACAGATGAGtcCCTTGAGATTACTAGAAACATGAGGCTCCTGTTGGAGGAGAGTAAAGATGCAGGGATCAGGACACTTGTTATGCTGGACGAGCAGGGAGAGCAGCTTGAGCGGATTGAGGAAGGGCTGGACCAGATCAACCAGGACATGAGAGAAGCTGAGAAAAACCTAACAGATCTTGGCAAATGCTGCGGTCTGTGCTCCTGTGATAAACTGAAGGACTTTGAAGCAAGTGGGGCATATAAGAAGGTTTGGGGTAATAATCAAGATGGGGTGGTGTCCAGCCAGCCTTCTTCTCGAGTCGTGGATGAGAGGGAGAAGATGACCATGAGCGGTGGATATATTAGAAGAGTGACAAACGATGCTAGGGAGGATGAAATGGAGGAAAACTTGGCACAGGTTGGCAGTATCCTTGGCAACCTCAGAAGCATGGCACTTGACATGGGCAATGAAATCGACACTCAGAACGTCCAGATTGAACGCATTCAGAGCAAGgCCATGGTTAACGAATCCCGCATCAATGAGGCCAATCAGAGGGCCACAAAGCTAATATCAAGATAAAAACATTGGATTTTCCTTTGTGAAACGTTTACTGTCTTCTGTAGGAAAGTGTGTGCGCATTGATACAAATTaagttttatcttttaaatgacTATTTACAAAACTTGGATTATTGCCTATATGAGAGTAAGTTATGTTTCAACAACAGCTCTtcaatacaagaaaaaaatgaatgttaatagTCTGTgctgtaattgtaatttaagcATGTATTGTACAGTATAGGctacaaaaaaacatcttttagactatcttagtttttttttaagcctgcAGAACACTTTCCATGGCCGATAACAGCTCACTATTCAGACAAAGCAGTGTCTTAAAGTTGTATTGGTAAATGTAACATCTTTGTCTACCTGagtagctttttaaaaaataaatccaatttTAAAGTTCAAGGGTTCGTTCCCATGAtgaacaaaatgctttttttccctgcTATACACGGACCACTGGGTTCTACAaataatctttctttttattttaaaactaaaactatatattttttgtcattctgtGGAGCTGGCAACCTAAACGCCGTCttgattgtcttttttttcttttatgaaataaaactgaaggTTACTCGGTGTGGGACGTTTTATCAACTAACTAAACCAAAGTCAGCCAATTGTGAGTTTAAACGCACGAAGTTGAATAAATTAGAGTTTTAATT

Function

symbol description
zgc:101731 Predicted to enable SNAP receptor activity and syntaxin binding activity. Predicted to be involved in synaptic vesicle fusion to presynaptic active zone membrane and synaptic vesicle priming. Predicted to be located in neuron projection and synapse. Predicted to be part of SNARE complex. Predicted to be active in plasma membrane. Is expressed in habenula; olfactory placode; otic placode; and peripheral olfactory organ.

NR:

description
PREDICTED: synaptosomal-associated protein 25-like

GO:

id name namespace
GO:0043005 neuron projection cellular_component
GO:0045202 synapse cellular_component
GO:0030054 cell junction cellular_component

KEGG:

id description
K18211 SNAP25; synaptosomal-associated protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258632.1 True 1599 mRNA 0.42 8 15893397 15900631
XM_043258633.1 False 1499 mRNA 0.41 8 15893397 15900634
XM_043258634.1 False 1595 mRNA 0.42 8 15893397 15900633

Neighbor

gene id symbol gene type direction distance location
capns1b capns1,capns1b,LOC107669758,LOC107587742,LOC107682413 coding upstream 147 15889354 ~ 15893250 (+)
si:ch211-137a8.4 si:ch211-137a8.4,LOC107669730,LOC107714190,LOC107548596,LOC107756666,LOC107682371,LOC107589723 coding upstream 15542 15872081 ~ 15877855 (+)
si:ch211-137a8.2 LOC107714189,LOC107669729,LOC107548595 coding upstream 27987 15845574 ~ 15865410 (+)
clip3 clip3,LOC107685098,LOC107714192,LOC107548591,LOC107669746 coding upstream 55489 15826161 ~ 15837908 (+)
gipr gipr,LOC107548593,LOC107714193,LOC107685094,LOC107756746 coding upstream 74251 15800729 ~ 15819146 (+)
zgc:113149 LOC107669760,LOC107714186,LOC107587722,LOC107756630 coding downstream 660 15901294 ~ 15906396 (+)
rap1gap2a rap1gap2,rap1gap2a,LOC107666198 coding downstream 9852 15910486 ~ 15969203 (+)
gucy2f gucy2f,LOC107714181,LOC107666202,LOC107589733,LOC107682463,LOC106613073 coding downstream 85445 15986079 ~ 15995992 (+)
nrip1a LOC107714172,LOC107587564,LOC107666194,LOC107682571,LOC107756533,LOC107589737 coding downstream 209874 16110508 ~ 16120566 (+)
zgc:153372 zgc:153372,LOC107682590,LOC107587555,LOC107757291 coding downstream 223913 16124547 ~ 16127643 (+)
G106941 NA non-coding upstream 255368 15637174 ~ 15638029 (+)
G106924 NA non-coding upstream 322235 15502558 ~ 15571162 (+)
G106926 NA non-coding upstream 382287 15510317 ~ 15511110 (+)
G106898 NA non-coding upstream 410725 15397722 ~ 15482672 (+)
G106873 sarm1,LOC107548548,LOC107669752,LOC107743642,LOC107685076,LOC107756984 non-coding upstream 602234 15290829 ~ 15291163 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding downstream 99581 16000215 ~ 16002131 (+)
G107141 NA non-coding downstream 168850 16069484 ~ 16069741 (+)
G107145 NA non-coding downstream 239179 16139813 ~ 16167005 (+)
LOC122358549 NA non-coding downstream 436180 16336814 ~ 16357622 (+)
G107232 NA non-coding downstream 443748 16344382 ~ 16344655 (+)
G107107 NA other upstream 9887 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 180958 15706513 ~ 15712439 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other upstream 965172 14912911 ~ 14928225 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other upstream 1931590 13957197 ~ 13961807 (+)
G106376 cluh,LOC107685050 other upstream 1976135 13916573 ~ 13917262 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other downstream 104235 16004869 ~ 16043265 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other downstream 189123 16089757 ~ 16236341 (+)
lyrm9 lyrm9,LOC107756492 other downstream 612674 16513308 ~ 16514221 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 1889211 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 1931438 17832072 ~ 18116953 (+)

Expression


Co-expression Network