mab21l1 (mab21l1,LOC107730834,LOC107683054,LOC107587182)


Basic Information

Item Value
gene id mab21l1
gene name mab21l1,LOC107730834,LOC107683054,LOC107587182
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 18388927 ~ 18396708 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258673.1
GTTCGGAGTCTTAAACACACCAACACAGCCAGGACACACACTTAAGAGCACCCTGCACTTTCTAACCCTTGTTGCAAATAGAGAAAAGCACCGCGAGTGGATACAAGAGGTTTGCTGAACTACTGATCCGTGCGTATGGACTTTTAATCGCTGGCTTGCGAGgggtttgactttttttgtttttggtcgCAATTGAAAACAGAAGCCGATGATTTAACTGCCTGACTTGGTGCATGTGCTCCACGCacaaataaaaagctattttttatttcgtAACCCccctttttttcctctaaataGTCCACTTTCTTCTCTAAAATTGGCTCCCGTACAAACAGCCGCGTTGGATCCCTCGGGTTACTGCGAGACTCCGGTGTACAACCCGGATCTCTGTCCAAATATGATCGCCGCCCAGGCCAAGCTGGTGTATCATCTCAATAAATACTACAACGAGAAATGCCAGTCTCGGAAAGCGGCCATCTCCAAGACCATCCGGGAGGTGTGCAAGGTGGTCTCGGATGTCCTGAAGGAGGTGGAGGTCCAGGAGCCCCGCTTCATCAGCTCCTTAAACGAAATGGATAACCGCTTCGAGGGGCTCGAGGTCATCTCCCCTACAGAATTCGAGGTGGTCCTGTATCTGAACCAGATGGGGGTCTTCAACTTCGTGGACGACGGCTCTCTGCCGGGCTGCGCCGTGCTCAAGCTGAGCGACGGGCGGAAGAGAAGCATGTCCCTCTGGGTCGAGTTCATCACGGCTTCGGGATACCTGTCCGCGCGCAAGATCCGCTCCAGGTTCCAGACGCTCGTGGCGCAGGCTGTGGATAAGTGCAGCTATAGGGACGTGGTTAAAATGGTCGCGGATACCAGCGAGGTGAAATTGCGCATCAGAGACAGATACGTGGTTCAGATCACCCCCGCGTTCAAGTGCACCGGCATATGGCCGCGCAGCGCTGCCCACTGGCCGCTGCCGCACATTCCGTGGCCTGGTCCGAACCGGGTGGCGGAAGTCAAAGCCGAGGGATTCAATCTCTTATCGAAGGAGTGTTACTCGTTGAACGGGAAGCAGAGCTCGGCGGAGAGCGACGCCTGGGTGTTGCAGTTCGCCGAAGCGGAGAACCGCCTGCTCCTGGGAGGGTGCAGGAAGAAATGCCTGTCCCTGCTCAAGACGCTGCGCGACCGACACCTTGAACTTCCCGGGCAGCCTCTCAACAACTACCACATGAAAACTCTCGTGTCTTACGAGTGCGAAAAACACCCGCGCGAGTCGGACTGGGACGAGAACTGCCTCGGGGATCGACTGAACGGGATTTTATTGCAGCTCATTTCGTGCTTGCAGTGCAGGAGATGCCCCCATTATTTCCTGCCAAACCTAGACCTTTTCCAAGGAAAGCCACATTCGGCCCTTGAAAACGCTGCCAAACAGACTTGGCGACTGGCGAGAGAAATTCTAACCAACCCTAAAAGCCTGGAGAAACTctgagCAGACTGACAGCGTCATCGTCTCCCTCCAGCATCAGCTCTGTCTCAGGGCTCTGGCTGACCACCACCTGGCCCCGGAAGCCCTTCCTCCCTCTCAGGGCCTCATCTTCCTCAGGGACTGCAGAGAGACAAGAATAATGGAAACGGGT

Function

symbol description
mab21l1 Predicted to enable metal ion binding activity; nucleotide binding activity; and nucleotidyltransferase activity. Predicted to be located in nucleus. Is expressed in several structures, including anterior neural keel; immature eye; nervous system; neural tube; and pharyngeal arch 3-7. Orthologous to human MAB21L1 (mab-21 like 1).

NR:

description
putative nucleotidyltransferase MAB21L1

GO:

id name namespace
GO:0048568 embryonic organ development biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K23092 MAB21L1; putative nucleotidyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258673.1 True 1628 mRNA 0.54 2 18388927 18396708

Neighbor

gene id symbol gene type direction distance location
dclk1b LOC107752421,LOC107704780,LOC108433804,LOC107683036,LOC107730822,LOC107582281 coding upstream 71748 18284959 ~ 18317179 (+)
spartb spg20,LOC107752446,LOC107683015,LOC107730857 coding upstream 105717 18270036 ~ 18283210 (+)
postnb LOC107704781,LOC107752481,LOC107587216,LOC107730854,LOC107582252,LOC107682985 coding upstream 134876 18240649 ~ 18254051 (+)
trpc4b trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445,LOC108433784 coding upstream 151622 18221272 ~ 18237305 (+)
LOC122358680 frem2b,LOC107752721,LOC107683412,LOC107730863,LOC107704782,LOC107582282,LOC108433801 coding upstream 349628 18037113 ~ 18039299 (+)
inpp5ka inpp5ka,LOC107704774,LOC107582245,LOC107683418,LOC107730810 coding downstream 315757 18712465 ~ 18720857 (+)
tekt1 tekt1,LOC107752352,LOC107704722,LOC107730869,LOC107587856,LOC107577743 coding downstream 324581 18721289 ~ 18724361 (+)
LOC122358577 NA coding downstream 327815 18724523 ~ 18727556 (+)
LOC122358576 NA coding downstream 330983 18727691 ~ 18734238 (+)
tmem106ba tmem106b,LOC107704771,LOC107587075,LOC107752274,LOC107582242,LOC107730846,LOC107683194 coding downstream 370144 18766852 ~ 18770394 (+)
LOC122358481 LOC107575069,LOC107748074,LOC107682967 non-coding upstream 316695 18054268 ~ 18072232 (+)
LOC122358482 NA non-coding upstream 529123 17857907 ~ 17859804 (+)
G107547 NA non-coding upstream 572102 17816132 ~ 17816825 (+)
G107477 NA non-coding upstream 822051 17566193 ~ 17566876 (+)
G107468 NA non-coding upstream 908879 17479848 ~ 17480048 (+)
LOC122358786 NA non-coding downstream 45987 18442695 ~ 18443413 (+)
G107688 NA non-coding downstream 128897 18525605 ~ 18526233 (+)
G107689 NA non-coding downstream 136841 18533549 ~ 18534339 (+)
G107693 NA non-coding downstream 162772 18559480 ~ 18559755 (+)
G107713 pds5b,LOC107587120,LOC107582244,LOC107683122,LOC107730842,LOC107752691,LOC107704775 non-coding downstream 273622 18670330 ~ 18675897 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other upstream 271974 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other upstream 342023 18045017 ~ 18046904 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other upstream 577724 17789845 ~ 17811203 (+)
lyrm9 lyrm9,LOC107756492 other upstream 1874706 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 2152586 16089757 ~ 16236341 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 359635 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 362874 18759582 ~ 18760497 (+)
si:dkey-30e9.6 LOC107683422,LOC107752859,LOC107588226,LOC107704721,LOC107582296,LOC107730865 other downstream 397372 18794080 ~ 18795982 (+)
G107777 NA other downstream 445568 18842276 ~ 18843855 (+)
LOC122358990 LOC107586958,LOC107704764,LOC107752630 other downstream 596637 18993345 ~ 18995991 (+)

Expression


Co-expression Network