LOC122358795 (hspb6,LOC107571389,LOC107675875,LOC107745202,LOC107747664,LOC107701566)


Basic Information

Item Value
gene id LOC122358795
gene name hspb6,LOC107571389,LOC107675875,LOC107745202,LOC107747664,LOC107701566
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 20251992 ~ 20253736 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258684.1
AcaacaaatgcagctttaataACACTTTTGGCATCGTGCTCCTCGATTAACTATCTCAGATCTCTGACAGCGCCATCGGTCCACTTATTTCTGGCATTTGTTTAGAGGAAGAGCTCATGTAATGGGGCGGTGTTTTCCTCAAGCTATTTAAACCTCCGACTAACCTGGACAGCAACAATTTTCCTTCTTTCTGTTGCGTAACAGGATAACCCCTAACATAATAACCAACCAGTCATACGCTCTGTGTTTTCTgaagcagttttatttattcggtggttatttttttttacattcatcgCAGAAGAATGGACTTCGACTTGCCTCCTTCTCTTCCGGTGAGCGGTATCCCATGGGAAAGGGTTCTCCCACCGTTATTCCCCCGGTGGAACGGGAAAATCGGACCTTATTCATGGACCCCAACCGAACTTCTAATCCCGGTTTCTGAGCACACCGGAGCAGCACAGGTGACCTGTGATCAGAAGGGATTCACTGTGCAGGTTGATGTAAAACACTTCAGTCCCGAGGAACTGCTGGTAAAAGTTACCGGAGATTATGTTGTGGTCGAGGGAAAACACGAACAAAAAAAGGACGGCTCAGGACTGGTGACACGTCAGTTTAACCGGAGATACAGGATCCCGAACGGAGTGGACATCACGGCCCTGGAATCAGCCATGTCACCAGAAGGCATGCTGGTGATCTCAGCGCCTCTGACACAAGGAGACAATTCCACAATGTTAAATCACAGCGGACCATgatgtgctcacacacacacacttttttttttggctgttctTCACTGTTTTAGTTCTTAACGTGTTAATGCAAGGCGCTTAAAGCTCCCATCCTCTGGGTTTCTCACCTAAAGCAACGGTAAAGACCAAAACAGACTCACTCCCCCTTGTGGCGGTGGGCTGCTCAATTCCAAACATACTTGATTTCAAGCCAACAAGGAAACCGTATCCCATTTTCTTCACACTTGCTGTCAGTTTAGCACACAGCCAGTAAGAGCGACAAATTTGTCCTGAAGTTAACATCCAAACACGAACCCACGGTCCTGAATTTAGTACGAGAAGTTCAGTTCGTTTTGATAGGCTATGTTGagattgtacatattttaaaaaaagcgatAATTTCAGTGTTAATCTTAACATTTGTGTGATGTACAGTTTGAATgtcaataaatgtaatgtaccACCCTTGA

Function

symbol description
hspb6 Orthologous to human HSPB6 (heat shock protein family B (small) member 6).

NR:

description
PREDICTED: alpha-crystallin A chain-like

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258684.1 True 1201 mRNA 0.45 3 20251992 20253736

Neighbor

gene id symbol gene type direction distance location
LOC122358796 psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 coding upstream 2259 20247178 ~ 20249733 (+)
lin37 lin37,LOC107745239,LOC107585799,LOC107675874,LOC107701558,LOC107747665 coding upstream 47772 20198240 ~ 20204220 (+)
hspb6 hspb6,LOC107675875,LOC107745202,LOC107747664,LOC107701566 coding upstream 61223 20188914 ~ 20190769 (+)
psenen psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 coding upstream 65131 20184067 ~ 20186861 (+)
igflr1 LOC107585721 coding upstream 102175 20146188 ~ 20149817 (+)
LOC122358794 lin37,LOC107745239,LOC107675874,LOC107747665,LOC107585799,LOC107701558 coding downstream 7991 20261727 ~ 20267188 (+)
LOC122359506 NA coding downstream 63810 20317546 ~ 20334995 (+)
LOC122358440 NA coding downstream 83810 20337546 ~ 20346308 (+)
LOC122358498 LOC107735540 coding downstream 100093 20353829 ~ 20356625 (+)
stim1a stim1a,stim1,LOC107745192,LOC107686510,LOC107570037,LOC107675872,LOC108432992,LOC108277929 coding downstream 151974 20405710 ~ 20438826 (+)
G108240 NA non-coding upstream 18807 20170769 ~ 20233185 (+)
G108231 LOC107571392,LOC107701561,LOC107740055 non-coding upstream 109620 20141805 ~ 20142372 (+)
G108211 NA non-coding upstream 196098 19998614 ~ 20055894 (+)
G108217 NA non-coding upstream 235363 20014813 ~ 20016629 (+)
G108207 NA non-coding upstream 337549 19914149 ~ 19914443 (+)
G108256 hsc70,LOC107745199,LOC107675864,LOC107585770,LOC108441346,LOC108241987 non-coding downstream 43652 20297388 ~ 20302209 (+)
G108337 NA non-coding downstream 67145 20320881 ~ 20321946 (+)
LOC122359467 NA non-coding downstream 97861 20351597 ~ 20352384 (+)
LOC122359263 NA non-coding downstream 579758 20833494 ~ 20838578 (+)
G108394 NA non-coding downstream 594986 20848722 ~ 20849915 (+)
G108245 psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 other upstream 2020 20184120 ~ 20249972 (+)
LOC122359185 LOC107742015,LOC107699248 other upstream 36513 20208170 ~ 20215479 (+)
si:dkey-262k9.2 LOC107694804,LOC107739770,LOC107755381,LOC107704708,LOC107585797,LOC107694807,LOC107582218 other upstream 477607 19721284 ~ 19774385 (+)
LOC122358990 LOC107586958,LOC107704764,LOC107752630 other upstream 1256001 18993345 ~ 18995991 (+)
G107777 NA other upstream 1408137 18842276 ~ 18843855 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other downstream 958074 21211810 ~ 21214493 (+)
LOC122358705 NA other downstream 1470668 21724404 ~ 21726266 (+)
G108571 NA other downstream 1478245 21731981 ~ 21733107 (+)
G108572 LOC107745176,LOC107698871 other downstream 1481278 21735014 ~ 21735718 (+)
G108573 NA other downstream 1482944 21736680 ~ 21737687 (+)

Expression


Co-expression Network