zgc:85932


Basic Information

Item Value
gene id zgc:85932
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22547353 ~ 22569791 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258720.1
ACGAGAAGGACAGAAGTGCTCCAGTATGACCGAGACAAAGAAAGCCTGGGACGGACTGTGGTCTCCCGCCTCCGGGCAGCCTCTGCAGGACGGCCTTTACACCGACGACAGGTTCCGGCACGACATGCTGCTTCAGAAAGACGTGCTTTGGAAACGACCAAAGGAGATCTGTCCGTTTCCTCAGTTCGTTGCGGACGGAGCCACTCGTATGGACGTCTGCCAAGGAGATCTGAgtgacTGCTGGTTCTTGTCTGCAGtggcgtctctctctctctatccttcTCTTCTGCATCGTGTCGTTCCCTCTGGCCAGGGCTTTCAGGAGGGCTACAGCGGCTGCTTCACTTTCCGGTTTTGGCAGTATGGTGAGTGGACTGAGGTGCGGGTCGATGACCGCTTGCCCACACAAAACGGTTCCCTGAAGTATCTGTGCTCCTCAGACAAAAATGAATTCTGGAGCGCTCTACTGGAAAAAGCTTATGCCAAGCTGAAGGGGGGTTATACTGCTCTGAACATGGGTTTTCCTCATGAGGCCATGGCAGACGTGACAGGTGGGGTTACAGAGGGCTTCATGGTGCCGGCTGACCCTCGAAAGCTGAGCTTTTTCCTTCACCCGCTGCTGCAGAAAGGAGCTCTGATCAACTGTGCTAACTCCAAGGATTCCCTTGGGAAGAAGAATGAGTATGGGATTATGTTCAGGCATGTCTACTCTGTGACCGGTTTGGAGACGatcaAGACTACGATGGGTCCGGTTCAGCTGATGCGGGTCAGGAACCCGTGGGGTAATACTGAGTGGGAGGGGCCTTGGAGTGACGAGAAAGGGAAGGAGTGGGACTTGGTGAGCGCTGAAGAGCAGCGGCGTGTTCAGAGAAGCCAGCGTAATGACGGGGAATTCTGGATGTCTCTGGCCGATTTCTGCCAGAACTTCGACACGATAGAGGTCTGTCACCTGAGCGAAGAAACGCTGAGCGAGAGCGGAGTCAAAAAGCCCTGGAAATGTACATCACATCACGGACGATGGGTTTCTTGGCAAGggccTCCTCAGTACAGCCTGACCCTGCTGGAGGAGGACGACGACCCCAGTGACCCTGAACTAACGTGCTCATTCCTGCTGGCGCTCATGCAGAAACACATTCGTCTGAAAGGAATGACGCTGCTGAAGGCCGCGCTGCACATATACAAGgcCCGATCCCAGGGTGATTTCCTCTCGTCTTGGGACATGTCTCAGCTGAGGCCGGTGCTCAGCACCACTGTAGACCCTAATAATCGTGATCAGTACGTCCAGCTGCGGGAGCTGGTGCTGCGCGGTCGCCTGGCGCCCGGTCATTACATCATCGTTCCCCAGACTTCAGAGACCAATGAGGAGAGAGAATTCCTCCTGAGAGTCCTGACTGAGAAAGGAAACAGTACCGTatATGTTGATACACCAGGAGAAGACTCCTCATTAACTCTGccgCTGTCTCCACGTCTCGCAGGTCTGCCGTCTGTAAACGAAGCCAAAGATCTCTTCGTGAAACACTGTGGCAAGGGGTCTTATTGTAGCCCTTTGGATCTGTGTAACCTGCTGAAAGAAGCCATTGCCAAAGGAGTGTTCGCGGGCAGCGAGAGGCAGCTGAGTCTGGAGCACTGCAAGAGCTTCGTGGTGCTCATGGACAGCCGAGGAATGGGACGACTCGACTCGACAGAGTTCCAGGCATTGTGGGAAAAACTGCGCAAGTGGACGatcatttttatgacatttgaCAAAAACAAGAACCAGGCCCTGGATTACGTAGAAATCCCACCCGCACTGACTGCAGCAGGCATACGGGTGGATGAGTTCATAATGCAGCTGATCGGCCTGCGCTACACCGAGCCAGATATGACGGTCAGCTTCCCGGGATTCCTCTTCCTGCTCACCAAACTGGACTGCATGATGCgcAAGTTTCAGGCATTTGATGTGACAGGAACGGGAATGATTTCAGTAAACTGCAGAcagTTCCTGTACATGACCATGTACAACTGATTCCAGAGCAGCTGCAGGAACACAGCTCTACATCTGCTTTACAGAGCGTTCCAGGAGAGGAAGCTGATTGGTCGAGACAGAGTTACATTTAAGCTACAATACTAGAAATTCTATATTAATAGatatgatgaaaaatacagttactatatatatatagcaactataaactttatttttttttactgcttgtACTACTATACTGCTTCTAGTAGACAGatgtcaattaattaatttgctc

Function

NR:

description
calpain-9-like isoform X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258720.1 True 2243 mRNA 0.52 21 22547353 22569791

Neighbor

gene id symbol gene type direction distance location
dhrs12la flj13639,LOC107725108,LOC107670134,LOC107669913,LOC103025652,LOC108433977,LOC108278219 coding upstream 39570 22499146 ~ 22507783 (+)
scg2a LOC107585745,LOC107670131,LOC107725137 coding upstream 53734 22489884 ~ 22493619 (+)
kcne4 LOC107669903,LOC107725203,LOC107733928,LOC107558850,LOC107670090 coding upstream 71642 22474004 ~ 22475711 (+)
acsl3a acsl3a,acsl3,LOC107585759 coding upstream 76164 22447594 ~ 22471189 (+)
slc8a2b slc8a2b,LOC107670115,LOC107725154,LOC107585757,LOC107558827,LOC107669914 coding upstream 103661 22360038 ~ 22443692 (+)
actn4 actn4,LOC107669904,LOC107570110,LOC106612603 coding downstream 2700 22572491 ~ 22616753 (+)
tyr tyr,LOC107670098,LOC107669900 coding downstream 144715 22714506 ~ 22731196 (+)
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding downstream 181743 22751534 ~ 22764962 (+)
lrrc51 LOC107706076,LOC107558849,LOC107670099,LOC107669906 coding downstream 238989 22808780 ~ 22813270 (+)
LOC122358711 NA coding downstream 254272 22824063 ~ 22834787 (+)
G108762 NA non-coding upstream 14126 22532872 ~ 22533227 (+)
G108743 NA non-coding upstream 36095 22501771 ~ 22511258 (+)
G108736 NA non-coding upstream 100461 22391683 ~ 22446892 (+)
G108723 NA non-coding upstream 191440 22340732 ~ 22355913 (+)
LOC122358849 NA non-coding upstream 197723 22346451 ~ 22349630 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding downstream 18144 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding downstream 49885 22619676 ~ 22629112 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding downstream 91194 22660985 ~ 22666293 (+)
G108949 NA non-coding downstream 204987 22774778 ~ 22775573 (+)
G108981 NA non-coding downstream 267894 22837685 ~ 22838122 (+)
G108573 NA other upstream 809666 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 811635 21735014 ~ 21735718 (+)
G108571 NA other upstream 814246 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 821087 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 1332860 21211810 ~ 21214493 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 205858 22775649 ~ 22777725 (+)
G108990 NA other downstream 379349 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 385920 22955711 ~ 22959679 (+)
G109132 NA other downstream 676984 23246775 ~ 23271291 (+)
G109193 NA other downstream 939641 23509432 ~ 23510315 (+)

Expression


Co-expression Network