LOC122358842


Basic Information

Item Value
gene id LOC122358842
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22277988 ~ 22279228 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258762.1
TCAGCCAGCAGAAACCAGTGCTACCGCATACCGCGTCCCCGTCTGATAACCCGTGCGCATTCAATCGAAGACGCGTCGTTTCTCCTCACTCGTGCCGTCATGAGGGCTAAGCTGGAGATCCTGGCTCTGGTTCTGGGCTCGATCGGTCTGGTCGGGAGCATCGCGGTGACCTTCATGCCCATGTGGAAGGTGACGGCCTACATCGGGCCCAACCTGATCGTGATGGAGACGCTGTGGGAGGGGTTGTGGATGGCCTGTATACGGCAGGCGGACTTCAACATGCAGTGCAAGGTCTACGACTCTCTGCTCATTCTGCCGGCGGACATCCAGGCCGCCCGCGGGCTCATGTGCGCCTCGGCCGCTCTCTCCGTCCTGGCCGTGCTGGTGTCCGCCTGCGGGATGAGGCCCGCCGACCGCTGCCGCCCGGACTCCCGGGGGAAGAAGGTGGTGCTGCTGGCGGGAGGCGCTCTGTTCGTGGTGGCCGGCCTCGTCACTCTCGTCCCCGTCTCCTGGTCCACTCACTCCATCGTCAGAGACTTCTACAACCCTTTGGTGGTGGAGTCGCAGAAGCGGGAGATCGGACAGGCGCTGTATGTGGGCTTCGCAGCGTTCATGTTCCTCTTGATCGCGGGGGTGGTCCTGCTGTGCCGGTACGGGaaggacgaggaggaggagaagccGTACGAAGCAGTGGAAAAGGACAAGGTGGAAATGAGCATGCTGGGACGGACAACTTCTTCTAAATCATACGTCTGACGTCCTGCTTTTATGTTTCTTGGCCGTACAAATCCTGGTTAATTTCGTTAAATGATCCTCGTAAACTACCTAAAAACATTGATTAggattgtatattatatttacgaCATTTTGTGTTGCGGTTATGTTCTTGTGCATCCGTAAACACATGATTTATTTGggattttgttttgcattattcaAGAGTGGCGAATGGCTACTCACTTTGTCTGtgtaatctttaaaatatgtgctttatttgcaaaaaaaaatcatttgcacAATTCATTTACTGTAGTTCTGTGTTTGTAGGAAAATTATAACTTAACTTGCATCTGCATCTTCAAAGATATAGACATTTAGTAAAACTGTCGGTGTAatctaaaaaaatgcattatttatgcaaacaagttacatatataactataaaaagttttagaaaaaagtacttttacataatatatatatatatatattttgtgtatactTGTAATAAACTAGTgcta

Function

GO:

id name namespace
GO:0030054 cell junction cellular_component
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258762.1 True 1241 mRNA 0.49 1 22277988 22279228

Neighbor

gene id symbol gene type direction distance location
tiam1b tiam1b,LOC107670130,LOC107705640,LOC107669892,LOC107558809,LOC107585792 coding upstream 3161 22220210 ~ 22274827 (+)
scaf4b LOC107669875,LOC107722265,LOC107670118,LOC107585791,LOC107558831,LOC107705626 coding upstream 72887 22183548 ~ 22205101 (+)
sgpp2 sgpp2,LOC107669878,LOC107705636,LOC107558808,LOC107585790,LOC107722257 coding upstream 103446 22167114 ~ 22174542 (+)
pxylp1 pxylp1,LOC107669877,LOC107558839,LOC107722277,LOC107698201,LOC107585747 coding upstream 212394 22051590 ~ 22065594 (+)
clstn2b si:ch211-276c2.2,LOC107698872,LOC107669856,LOC107739921,LOC107585786 coding upstream 263681 21842663 ~ 22014307 (+)
LOC122358834 zgc:110333,LOC107722269,LOC107670094,LOC107585751,LOC107669883,LOC107705634,LOC107558842 coding downstream 3452 22282680 ~ 22284032 (+)
cldn8.1 cldn8,LOC107722270,LOC107670101,LOC107705635,LOC107669885,LOC107578419 coding downstream 7562 22286790 ~ 22288670 (+)
LOC122358830 LOC107722268,LOC107585749,LOC107670104 coding downstream 10702 22289930 ~ 22293389 (+)
grik1b grik1b,LOC107670116,LOC107669874 coding downstream 16088 22295316 ~ 22325707 (+)
slc8a2b slc8a2b,LOC107670115,LOC107725154,LOC107585757,LOC107558827,LOC107669914 coding downstream 80810 22360038 ~ 22443692 (+)
G108713 NA non-coding upstream 99358 22177392 ~ 22178630 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding upstream 241150 22028437 ~ 22036838 (+)
G108648 NA non-coding upstream 251679 22025798 ~ 22026309 (+)
G108561 NA non-coding upstream 357578 21642583 ~ 21920410 (+)
G108723 NA non-coding downstream 61504 22340732 ~ 22355913 (+)
LOC122358849 NA non-coding downstream 67223 22346451 ~ 22349630 (+)
G108736 NA non-coding downstream 112455 22391683 ~ 22446892 (+)
G108743 NA non-coding downstream 222543 22501771 ~ 22511258 (+)
G108740 NA non-coding downstream 243522 22522750 ~ 22564181 (+)
G108573 NA other upstream 540301 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 542270 21735014 ~ 21735718 (+)
G108571 NA other upstream 544881 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 551722 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 1063495 21211810 ~ 21214493 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 496421 22775649 ~ 22777725 (+)
G108990 NA other downstream 669912 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 676483 22955711 ~ 22959679 (+)
G109132 NA other downstream 967547 23246775 ~ 23271291 (+)
G109193 NA other downstream 1230204 23509432 ~ 23510315 (+)

Expression


Co-expression Network