LOC122358927


Basic Information

Item Value
gene id LOC122358927
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 21715201 ~ 21723980 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258913.1
CCAGAGAACGCAACGGTTATGAACGAGGCCCGAGGGCTAGTAACCGCTGGCTTCacaaaaagaaagtgaaatagATTTTCTCGGTTGATTTTCCGCTTTTATAGTGACAGAATCAATATTTACGATACGGAATATCACGTGCACCTTTACAATGTACCGCTTGAGATTTGGATAAATCTGCTTAATGCTAGGCTAATCAAGGGTCAGTCAACAGATTCTGTTTCAGCTGTTCATTTCTATCATGAATGACACACAAGCAGGCAGAGATGAAGATTTTTCTCCTTCGCGCAGTTCAGAACCAgagcccagctgtgtgtctacGAGGAGTGAATGGTCTATGGGTCACCCGGTACATTTTGGAGAAACACAGACTGATCCCAGTTCAGTTAATAAAAAGGAATTTGAATCAGAGCCCAGCTGCGTGTCTATGAGGAGTGACTGGTCTATGGGACACCCAGTGCATTTTAAGAGTAGAGATACACCGACCGATCTGAGTTCAATTCAGCAGAAGAAATCAGAACCAGAACATAGCTGGGTATCAATGAGAAATGATGAGTTTATTAGTCACCTGGTACAGATTGATCTCAACGATGAAGTCCTCAACAAATTTAGATTCAATCTGATGGAAAAGTTTATGTGCCTGTGTGAAGGAATAGCAAAGCAGGGAAACCCAACACTCCTGAATGAGATCTACACAGAGGtctacatcacagagagtgagagtggAGAGATCAGTAATGAACATGAAGTGAGACAGATTGAGACACAGTCCAGGAGAGCAGCAACAGAGGACACACCGATCAAATGCAGTGAGATCTTTAGATCTTTACCTGGACAAGACAAAGCCATCAGAACTGTGCACAAAggagtcgctggcattggaaaaacagtctctgtgcagaagttcatcctggactgggctGAAGGGAAAAAGAATCAGGACGTGCAGCTcatatttccacttcctttcagagAACTCAATCTGATGAAGGACAAAATACTCAGTCTTTCAGATCTTCTTCATGTCTTTTTCcttgaaacaaaagaaatggaaatatcttgtgacaaatataaaatgttgttcatctttgatggtcttgATGAGTGTCGTCTTcccttacattttaaaaatgagactCTACGgcatgcaaacaaaaagaaatcaggGGATGTGCTACTGACAAACCTGATTGTGGGGaatctgcttccctctgctctcatctggatcacctccagaccagcagcagctgatctcATCCCCTCTGAGTGTGTCCATCGAGTCACAGAGGTACGAGGCTTCAATGATCCGCAGAAAGAGGAATACTTCAGGAAGAGGATCATGGATCAAAGTCTGGCCAAAAGAATCATCTCACACCTGAAGTCATCAAGGAGCctctacatcatgtgccacatcccagtgttctgctggatctcagccgCTGTTTTAGAGAAGATGCTGAGTCAAGCAGAGAGTGGAGAGATTCCCAAGACTCTgactcaaatgtacacacacttcttGATCCTTCAGACCGACATCAAACATGAGAAGGACTATGAGAAAAACTTGACAGATGAAGAAATTATCCTCAAACTGGGGAATCTGGCTTTTCAGCAGCTTGTAAAAGGTAATCTGATCTTCTATGAGGAAGACCTGATAGAGTGTGGCATTGATGTGACAGAAGCATCAGTGTACTCAGGATTGTGTactcagatcttcagagaggagtTTGGCTGGTATCAGGGCAAAGTCTTCTGCTTTGTTCATCTGAGCGTTCAGGAACATCTGGCAGCTCTATATGTGCACCTCTCCTGTATAAACAGCaacacaaatgtatttgaaGAAATCAAACAGAGTTTGTGGTCTAAAATTAAGGACTTTTTTCAACTTGATTCATCAGAACATGTTTCATTGTCTGAGCTACATCAGAGAGCTGTGAATGAGGCTCTACAGAGTAAAAATGGACATTTAGACCTTTTCCTGCGGTTTCTTCTGGGTCTGTCTGTGGAGTCTAATCAGGTTCTCCTTCAAGgactaataaaacaaacaagatgcAGGTCTGAAAGCAATGTGAAAACAGCTGAGTACATCAAGATGAAGATCCGGACCATTACCTTTCCAGATAAATTCATCAATCTGTTccactgtctgaatgaactgggTGATAATTCACTAGTGGAGGAAATACAACAGTATCTGAAATCTGGAAcagtaaataaaaccaaactCTCTTCATCTCAGTGGTCAGCTGTggtttttgtgttgttgacaTCAGAGGATAAGCTAGAAGAGTTTGATCTGAATAAATTTGTAGTAGGAaataataaagctgaaaatatgAAAGCTTTTCAAAAGCTGCTGCCTTTGATTAAAGAAGCCAGATCAGTGCAGTTGTGGGATTGTGGTCTTACAGATGAAAGTTGTGCTGCCTTAGCTTccgctctgagatcaaacccctcacacctgagagaactggatATGTCTAGGAATGAACTAGGAAATTCAGGAGTCACTCTGCTCTCTGCTGTACTGGAGAATCATCACTGTAACCTTAAGAAACTAGAGTTGAGATATTGTGGTgtcacagatgaaggttgtgctgctctggcttcagctctgagatcaaacccctcacatCTGAGACAACTGGATCTATCTGGAAATAACCTAGGAGACTCAGTGATACTGCTTTCTGATGTACTACAGAATCCTCTCTGTAAACTTGAAAAACTGTGGTTGTGGAACTGCGGTgtcacagatgaaggttgtgctgctctggcttcagctctgaaatCGACCTCGCACCTGACAGAGCTGGATCTGTCTAATAATAAACTACGTGACTCAGATATGCAGCTTCTCTGTGATGCACTTAAGAATCCCCAATGCAAACTGGAGATACTGGAGTTGAGTTATTGCGGGCTCACAGATAGAAGTTGTTctgctctggcttcagctctgagatcaaacccttcACACCTGAGACATCTGAATCTGATTGGGAATAAACAACAGAAGTTAGAAGATCCATTTCTTTCCGATCTGAAGGATGATGAACCGTATTATAAACTGAAGACATTATACTATTTGTCCCTGTAATATGAAtatcattatgtattttttctgaaatggaTCTGTGATGCGACAGCAGTTTCTTCAGGAACGACTTTTGGTGAATAAGGAGCCACTGCAGAAATCAACAGAGACTGACAACGCAAATGcaatcttgcttttttttttttttgcgggaCTGTTCTTATAAATTTCCAAAACAGTTTATTAGAGGACCTGAACTTACTGtatcatttaaaagtattttttataagcAATGACCCATTGAAATTAGTGCTGAAGAGCACTATTAgtaattttgaatcattttagaTTCACTATATTGACTACAGTGTAGCTGTAACATTCAGTACACACTGATAGAAGTGATCTAAACTCTAATTTTAATCTACAAGCCAGACTATTTATTCTAATGTGACGATGTGATTTATTGTTCAATTATCCCAGCATTGTTTTCATGACTCTTTTAAACAGCAGGAGA

Function

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258913.1 True 3551 mRNA 0.41 14 21715201 21723980

Neighbor

gene id symbol gene type direction distance location
mtnr1ba mtnr1ba,LOC107745177,LOC107585812,LOC107669925,LOC107705472,LOC108413652 coding upstream 132294 21567245 ~ 21582907 (+)
fat3a fat3,fat3a,LOC107564369,LOC107705473,LOC107585783,LOC107698854,LOC107745210 coding upstream 160661 21420083 ~ 21554540 (+)
gal3st2 LOC107698869,LOC107745180,LOC107585737,LOC107564367 coding upstream 419299 21285387 ~ 21295902 (+)
efhd1 efhd1,LOC107585735,LOC107741634,LOC107698858,LOC107669899,LOC107564379 coding upstream 451757 21255183 ~ 21263444 (+)
trnag-ucc_4 NA coding upstream 460196 21254934 ~ 21255005 (+)
LOC122358818 si:ch211-276c2.2,LOC107698872,LOC107585786,LOC107669856,LOC107739921,LOC108278112,LOC108440474 coding downstream 67626 21791606 ~ 21833216 (+)
clstn2b si:ch211-276c2.2,LOC107698872,LOC107669856,LOC107739921,LOC107585786 coding downstream 118683 21842663 ~ 22014307 (+)
pxylp1 pxylp1,LOC107669877,LOC107558839,LOC107722277,LOC107698201,LOC107585747 coding downstream 327610 22051590 ~ 22065594 (+)
sgpp2 sgpp2,LOC107669878,LOC107705636,LOC107558808,LOC107585790,LOC107722257 coding downstream 443134 22167114 ~ 22174542 (+)
scaf4b LOC107669875,LOC107722265,LOC107670118,LOC107585791,LOC107558831,LOC107705626 coding downstream 459568 22183548 ~ 22205101 (+)
G108553 NA non-coding upstream 98008 21616656 ~ 21617193 (+)
G108427 NA non-coding upstream 512692 21201387 ~ 21202509 (+)
G108418 LOC107086176 non-coding upstream 524828 21072081 ~ 21190373 (+)
G108394 NA non-coding upstream 865286 20848722 ~ 20849915 (+)
LOC122359263 NA non-coding upstream 876623 20833494 ~ 20838578 (+)
G108569 LOC107573028,LOC107705465,LOC107697810,LOC107685875,LOC107564371,LOC107566573,LOC107585758,LOC107669894,LOC107573797 non-coding downstream 3080 21727060 ~ 21727570 (+)
G108648 NA non-coding downstream 301818 22025798 ~ 22026309 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding downstream 304457 22028437 ~ 22036838 (+)
G108713 NA non-coding downstream 453412 22177392 ~ 22178630 (+)
G108721 NA non-coding downstream 541852 22265832 ~ 22323620 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 500708 21211810 ~ 21214493 (+)
G108230 hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664 other upstream 1460930 20189033 ~ 20254271 (+)
G108245 psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 other upstream 1465229 20184120 ~ 20249972 (+)
LOC122359185 LOC107742015,LOC107699248 other upstream 1499722 20208170 ~ 20215479 (+)
si:dkey-262k9.2 LOC107694804,LOC107739770,LOC107755381,LOC107704708,LOC107585797,LOC107694807,LOC107582218 other upstream 1940816 19721284 ~ 19774385 (+)
LOC122358705 NA other downstream 424 21724404 ~ 21726266 (+)
G108571 NA other downstream 8001 21731981 ~ 21733107 (+)
G108572 LOC107745176,LOC107698871 other downstream 11034 21735014 ~ 21735718 (+)
G108573 NA other downstream 12700 21736680 ~ 21737687 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 1051669 22775649 ~ 22777725 (+)

Expression


Co-expression Network