tada2a (tada2a,LOC107661114,LOC107755391)


Basic Information

Item Value
gene id tada2a
gene name tada2a,LOC107661114,LOC107755391
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9679771 ~ 9696544 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259025.1
TCCTCTTCTTCGTGGGACGTTTGTTCAGCGGCGCGGGTCGACGCCGATCCACCGAAGTGTGTTTACGTCCTCGGGTGCGTGCTAAACATATAcctctttgtttttatatactcTGCCTAGCTGGAACGCCTAAGCGGCGCgatctttaatatttcttttatcaAAAAGCCGTGATAAGATCGACTAAACGGTCGCAGAGAAGAGGAAGGGTTCAGGTTTTCCCTCATCAGCATGGATCGCCTGGCGTCTTTTGGAAATGATCCTTTCGATAAGCCTCCCTGTCGAGGATGTTCCTCATATCTAGTGGAGCCTTATATTAAATGTGCTGAATGTGGACCGTCACCTTTCCTCTTGTGCCTGCAGTGCTTCACTAGAGGATACGAGTATAAAAAGCACCAGAGTGACCACAAGTACGAAATCATGACCTCAGATTTCCCCGTGTTAGAGCCTGGCTGGACGGCGCAGGAGGAGATGGCCCTGTTAGAGGCCGTCATGGACTGTGGCTTTGGTAACTGGCAGGATGTGGCTTACCAGATGCGCACCAAGACCAAAGAGGAGTGTGAAGGGCACTACATGAAGAACTTCATCAACAATCCTCTGTTCTCCTCCACTCTGCTCAGTCTCAGACAGATGGAAGATCATCTGTCCCGGACCGCAGACACAGCCATTCCCTTTAAGCCCACCGATGATCCTCCAAGACCTTCATTCGACTCTCAGCTGTCCAGAGACATGGCTGGATACATGCCGGCTCGAGCAGACTTCATGGAGGAGTTTGATAATTATGCTGAATGGGATTTGAAAGATATCGACTTCGTTGACGACGACTCTGATATTCTTCACgCTCTGAAGGTTGCAGTAGTTGACATATATCACTCCAGACTTAAAGAGAGACAGCGGAGAAAAAAGATCATTCGAGACCATGGTCTCATCAACCTGCGCAAATTTCAGATTCTGGAAAGGCATTATCCCAAGGAAGTGCAGGACCTTTATGATGTCATGAGACGCTTTGCACGTGTGGTGGGTCCCATAGAGCACGACAAGTTCATCGAGAGTCACGCCTTGGAGTTTGAGCTGAGGAGGGAGATCCGTAGGCTGCAGGAGTACAGGAGAGAGGGAATACAGTCCTTCTGCGGTGCTAAAGTGTACGAGAGAGTGAAACGCATACGAGAGGACGAGCGCAGGAAGAGGAACATGCTGTGTGACGTCCTGCAGTACATTCACGACACCCGCGCCTGCCAGCAGTGGCTCCACAAACAGGCCGCCATCGATGCTGGAATCACCCCTGTGGTCACCACTATCACCACCTCAGGCAGAAGAAGTGCACCTCCTCTCAATTTAACAGGACTGCCTGGCACCGAGAAACTCaacgagagagaaaaagagTTATGTCAGGTGGTTCGTCTGGTGCCTGGGGCGTATCTGGAGTACAAACAGGCCCTGCTGAACGAGTGCCGGCGGCAGGGGGGTCTACGGCTGGCACAGGCCCGATCGCTCATCAAGATAGATGTCAACAAGACACGCAAAATCTATGATTTCCTTATCAAAGAGGGCTACATCAATAAGGCTTAGTGTTGATTGAACTGCTGCAAGGACATCTGATAGATGAAGACTCATACTTATTGTGAATCGTTCATGTTGAGAATGAGCAATGAGAGATGACAGGTTTTAAGTGCACTGCTTTGATGTACTTAAAGTCATTCATTCCTTACAGATCTGcacctgtttgttttcttaaagaCCGATGGGGTGCTTCTTTAAAGCTGTGTGTAGGACTATATAAGTTAATAGTTGTGTAAAAAGACCGCTGCTGTTCGTGCTGGTGAATCCTTCACTTTAATATTAagactaattttatttttgtttatttgtctgtgTGCTCTCTAAATtgttgatacatttttaaactctgtaattgttaaatgaatattaCCAGGTCTTTGAAGAAcatctaaatggaaaaaaatcaacataaatAAGAATTcgcttttcaaagaaaatgaaa
>XM_043259026.1
CAGAACGCAGGAGCCGCTGGGGGGCGCTGTTTCAAAACCACTCCTCTTCTTCGTGGGACGTTTGTTCAGCGGCGCGGGTCGACGCCGATCCACCGAAGTGTGTTTACGTCCTCGGCCGTGATAAGATCGACTAAACGGTCGCAGAGAAGAGGAAGGGTTCAGGTTTTCCCTCATCAGCATGGATCGCCTGGCGTCTTTTGGAAATGATCCTTTCGATAAGCCTCCCTGTCGAGGATGTTCCTCATATCTAGTGGAGCCTTATATTAAATGTGCTGAATGTGGACCGTCACCTTTCCTCTTGTGCCTGCAGTGCTTCACTAGAGGATACGAGTATAAAAAGCACCAGAGTGACCACAAGTACGAAATCATGACCTCAGATTTCCCCGTGTTAGAGCCTGGCTGGACGGCGCAGGAGGAGATGGCCCTGTTAGAGGCCGTCATGGACTGTGGCTTTGGTAACTGGCAGGATGTGGCTTACCAGATGCGCACCAAGACCAAAGAGGAGTGTGAAGGGCACTACATGAAGAACTTCATCAACAATCCTCTGTTCTCCTCCACTCTGCTCAGTCTCAGACAGATGGAAGATCATCTGTCCCGGACCGCAGACACAGCCATTCCCTTTAAGCCCACCGATGATCCTCCAAGACCTTCATTCGACTCTCAGCTGTCCAGAGACATGGCTGGATACATGCCGGCTCGAGCAGACTTCATGGAGGAGTTTGATAATTATGCTGAATGGGATTTGAAAGATATCGACTTCGTTGACGACGACTCTGATATTCTTCACgCTCTGAAGGTTGCAGTAGTTGACATATATCACTCCAGACTTAAAGAGAGACAGCGGAGAAAAAAGATCATTCGAGACCATGGTCTCATCAACCTGCGCAAATTTCAGATTCTGGAAAGGCATTATCCCAAGGAAGTGCAGGACCTTTATGATGTCATGAGACGCTTTGCACGTGTGGTGGGTCCCATAGAGCACGACAAGTTCATCGAGAGTCACGCCTTGGAGTTTGAGCTGAGGAGGGAGATCCGTAGGCTGCAGGAGTACAGGAGAGAGGGAATACAGTCCTTCTGCGGTGCTAAAGTGTACGAGAGAGTGAAACGCATACGAGAGGACGAGCGCAGGAAGAGGAACATGCTGTGTGACGTCCTGCAGTACATTCACGACACCCGCGCCTGCCAGCAGTGGCTCCACAAACAGGCCGCCATCGATGCTGGAATCACCCCTGTGGTCACCACTATCACCACCTCAGGCAGAAGAAGTGCACCTCCTCTCAATTTAACAGGACTGCCTGGCACCGAGAAACTCaacgagagagaaaaagagTTATGTCAGGTGGTTCGTCTGGTGCCTGGGGCGTATCTGGAGTACAAACAGGCCCTGCTGAACGAGTGCCGGCGGCAGGGGGGTCTACGGCTGGCACAGGCCCGATCGCTCATCAAGATAGATGTCAACAAGACACGCAAAATCTATGATTTCCTTATCAAAGAGGGCTACATCAATAAGGCTTAGTGTTGATTGAACTGCTGCAAGGACATCTGATAGATGAAGACTCATACTTATTGTGAATCGTTCATGTTGAGAATGAGCAATGAGAGATGACAGGTTTTAAGTGCACTGCTTTGATGTACTTAAAGTCATTCATTCCTTACAGATCTGcacctgtttgttttcttaaagaCCGATGGGGTGCTTCTTTAAAGCTGTGTGTAGGACTATATAAGTTAATAGTTGTGTAAAAAGACCGCTGCTGTTCGTGCTGGTGAATCCTTCACTTTAATATTAagactaattttatttttgtttatttgtctgtgTGCTCTCTAAATtgttgatacatttttaaactctgtaattgttaaatgaatattaCCAGGTCTTTGAAGAAcatctaaatggaaaaaaatcaacataaatAAGAATTcgcttttcaaagaaaatgaaa
>XM_043259028.1
ACTCCTCTTCTTCGTGGGACGTTTGTTCAGCGGCGCGGGTCGACGCCGATCCACCGAAGTGTGTTTACGTCCTCGGGTGCGTGCTAAACATATAcctctttgtttttatatactcTGCCTAGCTGGAACGCCTAAGCGGCGCgatctttaatatttcttttatcaAAAAGCCGTGATAAGATCGACTAAACGGTCGCAGAGAAGAGGAAGGGTTCAGGTTTTCCCTCATCAGCATGGATCGCCTGGCGTCTTTTGGAAATGATCCTTTCGATAAGCCTCCCTGTCGAGGATGTTCCTCATATCTAGTGGAGCCTTATATTAAATGTGCTGAATGTGGACCGTCACCTTTCCTCTTGTGCCTGCAGTGCTTCACTAGAGGATACGAGTATAAAAAGCACCAGAGTGACCACAAGTACGAAATCATGACCTCAGATTTCCCCGTGTTAGAGCCTGGCTGGACGGCGCAGGAGGAGATGGCCCTGTTAGAGGCCGTCATGGACTGTGGCTTTGGTAACTGGCAGGATGTGGCTTACCAGATGCGCACCAAGACCAAAGAGGAGTGTGAAGGGCACTACATGAAGAACTTCATCAACAATCCTCTGTTCTCCTCCACTCTGCTCAGTCTCAGACAGATGGAAGATCATCTGTCCCGGACCGCAGACACAGCCATTCCCTTTAAGCCCACCGATGATCCTCCAAGACCTTCATTCGACTCTCAGCTGTCCAGAGACATGGCTGGATACATGCCGGCTCGAGCAGACTTCATGGAGGAGTTTGATAATTATGCTGAATGGGATTTGAAAGATATCGACTTCGTTGACGACGACTCTGATATTCTTCACgCTCTGAAGGTTGCAGTAGTTGACATATATCACTCCAGACTTAAAGAGAGACAGCGGAGAAAAAAGATCATTCGAGACCATGGTCTCATCAACCTGCGCAAATTTCAGATTCTGGAAAGGCATTATCCCAAGGAAGTGCAGGACCTTTATGATGTCATGAGACGCTTTGCACGTGTGGTGGGTCCCATAGAGCACGACAAGTTCATCGAGAGTCACGCCTGTGCTAAAGTGTACGAGAGAGTGAAACGCATACGAGAGGACGAGCGCAGGAAGAGGAACATGCTGTGTGACGTCCTGCAGTACATTCACGACACCCGCGCCTGCCAGCAGTGGCTCCACAAACAGGCCGCCATCGATGCTGGAATCACCCCTGTGGTCACCACTATCACCACCTCAGGCAGAAGAAGTGCACCTCCTCTCAATTTAACAGGACTGCCTGGCACCGAGAAACTCaacgagagagaaaaagagTTATGTCAGGTGGTTCGTCTGGTGCCTGGGGCGTATCTGGAGTACAAACAGGCCCTGCTGAACGAGTGCCGGCGGCAGGGGGGTCTACGGCTGGCACAGGCCCGATCGCTCATCAAGATAGATGTCAACAAGACACGCAAAATCTATGATTTCCTTATCAAAGAGGGCTACATCAATAAGGCTTAGTGTTGATTGAACTGCTGCAAGGACATCTGATAGATGAAGACTCATACTTATTGTGAATCGTTCATGTTGAGAATGAGCAATGAGAGATGACAGGTTTTAAGTGCACTGCTTTGATGTACTTAAAGTCATTCATTCCTTACAGATCTGcacctgtttgttttcttaaagaCCGATGGGGTGCTTCTTTAAAGCTGTGTGTAGGACTATATAAGTTAATAGTTGTGTAAAAAGACCGCTGCTGTTCGTGCTGGTGAATCCTTCACTTTAATATTAagactaattttatttttgtttatttgtctgtgTGCTCTCTAAATtgttgatacatttttaaactctgtaattgttaaatgaatattaCCAGGTCTTTGAAGAAcatctaaatggaaaaaaatcaacataaatAAGAATTcgcttttcaaagaaaatgaaa

Function

symbol description
tada2a Predicted to enable chromatin binding activity and transcription coactivator activity. Predicted to be involved in chromatin remodeling; positive regulation of histone acetylation; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of histone acetylation. Predicted to be part of SAGA-type complex. Predicted to be active in nucleus. Orthologous to human TADA2A (transcriptional adaptor 2A).

NR:

description
PREDICTED: transcriptional adapter 2-alpha-like

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003682 chromatin binding molecular_function

KEGG:

id description
K11314 TADA2A, ADA2; transcriptional adapter 2-alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259025.1 True 2002 mRNA 0.47 15 9679812 9696544
XM_043259026.1 False 1949 mRNA 0.47 16 9679771 9696544
XM_043259028.1 False 1932 mRNA 0.46 14 9679810 9696544

Neighbor

gene id symbol gene type direction distance location
nek8 nek8,LOC107672375,LOC107758702,LOC107661116,LOC107592757,LOC107582647 coding upstream 92669 9577565 ~ 9587102 (+)
trnar-ucu_52 NA coding upstream 104828 9574855 ~ 9574943 (+)
trnat-agu_66 NA coding upstream 105189 9574509 ~ 9574582 (+)
zgc:174895 zgc:174895,LOC107672400,LOC107657114,LOC107752376,LOC103023064,LOC105911024,LOC108443501,LOC108278204,LOC106612798 coding upstream 111263 9566304 ~ 9568508 (+)
LOC122359051 LOC107582609,LOC107672389,LOC107758673,LOC107694033,LOC107592755,LOC107672392,LOC107752375,LOC107582610 coding upstream 121581 9555556 ~ 9558190 (+)
mrm3a LOC107716545,LOC107582598,LOC107672374 coding downstream 147861 9844405 ~ 9847385 (+)
p2rx8 LOC107672369 coding downstream 215112 9911656 ~ 9917112 (+)
flot2b flot2b,LOC107661103,LOC107727921,LOC106581211,LOC105011286 coding downstream 230724 9927268 ~ 9935456 (+)
galnt17 wbscr17,LOC107714690,LOC107582595,LOC107727938,LOC107554251,LOC108411682 coding downstream 252849 9949393 ~ 9965676 (+)
gdpd1 gdpd1,LOC107672421,LOC107554273,LOC107659934 coding downstream 390133 10086677 ~ 10092950 (+)
G105002 NA non-coding upstream 136569 9542366 ~ 9543202 (+)
G104974 NA non-coding upstream 287202 9392141 ~ 9392569 (+)
G104973 NA non-coding upstream 287918 9391457 ~ 9391853 (+)
G104937 NA non-coding upstream 429363 9249947 ~ 9250408 (+)
G104925 NA non-coding upstream 449584 9229959 ~ 9230187 (+)
G105101 NA non-coding downstream 1530 9698074 ~ 9698409 (+)
G105106 NA non-coding downstream 9664 9706208 ~ 9706530 (+)
G105112 NA non-coding downstream 37659 9734203 ~ 9738624 (+)
G105109 LOC107727913,LOC108415199,LOC107672419,LOC107582599,LOC107714247,LOC107661107,LOC108277446 non-coding downstream 67327 9763871 ~ 9803117 (+)
G105141 NA non-coding downstream 97204 9793748 ~ 9795843 (+)
G105011 NA other upstream 6426 9669634 ~ 9673345 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other upstream 55799 9588789 ~ 9623972 (+)
dhrs11b.1 dhrs11b,LOC107694033,LOC107592755,LOC107752375,LOC107582609,LOC107672392,LOC107758673 other upstream 127643 9549752 ~ 9552128 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 155797 9515955 ~ 9523974 (+)
LOC122358919 armc9,LOC107668662,LOC107668488,LOC107720734 other upstream 399302 9252508 ~ 9280469 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other downstream 6882 9703426 ~ 9715689 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other downstream 396911 10093455 ~ 10110443 (+)
G105248 NA other downstream 508295 10204839 ~ 10207452 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other downstream 656617 10353161 ~ 10390600 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 1025428 10721972 ~ 10728395 (+)

Expression


Co-expression Network