si:ch1073-145m9.1 (si:ch1073-145m9.1,LOC107592629,LOC107690475,LOC107718303,LOC107743751)


Basic Information

Item Value
gene id si:ch1073-145m9.1
gene name si:ch1073-145m9.1,LOC107592629,LOC107690475,LOC107718303,LOC107743751
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13560833 ~ 13564722 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259119.1
ATGGTGCCCTCATTTCATGGCAATGGCAGAAATGCGCAGAGTGTGACCGGTGCCTGTTGCCTTGTTTTccgttgttttgttttttttttctcggtaTGGTGTTCCTATCAAGTCAAGCGGTGGAGTTTTGCGTTATCAACGAGTGACGCGTCTAAACGCCGACGCCTCCATGCTTCATCACgttaTATACGGATTCTTCTTCTTGTCGTTGCCTGGATTGTGCATCGGGACCCAGGCAGTTTTGTACCCCTGTATTTGTTGTCTGTTATATTGGATGGGGTGGATGGCTGGGCGGCCCGTCGGCTGCAGCAGACGTCCAGGTTCGGAGCGTGGCTGGATGTGGTCATTGACAATGTAGGACGCGGCATGCTCTGGAACATGCTTTACGACTGGGGCTGGCTGGTGTCTTCAGTAGAGtggtgtgtatttgtgtgcaaCCACAATGCCAGAGGTGCTCAGTGGAAGAGCTCGTTCGTGGAGAGCCCGTTTTGGGTGCAGGCAGTGATGGCAAAAGGCTTCAAGACTCCTTTGGGTATTCTGACGATAGCAGGGCTCCATGTTTTACCCGTGTGGCTGTATGGTTTCCAGTACGAGGTGCTGTCGCAGACTCTCTTTTTCCCAAACTGGCTACAGATTCTGGGGATCCTGGTGCTGACAGCGGGGCGATTACTGGGCTTCGCAGTTGAGATGTGGTGCATCGTAACCCATTTGAGATTCTTACTggatgaagaggaagaaaagaagaacTAGCGAATCTCTAACGGTTCATTTAGGATGTAGTAAGGGTTTAGattgaaattcatattttatgagACTTCTGGTCTAAGAAGCAGCTGAAAAAACACTGCATCTATGTTACTGAGCTTGTTGCATGTAATTTATTGAAAACCTATTTATATTTTCTCAAAAACTTATTTTCCTTAATACTGCATTTAAGGATTCTGGCTGTATATGTATTCcttaaatgtagtttataaGAAAGGAAGCTTTTTGCACTGTGACAGTcacattgtatttaaaatgttctttatgcAGCAAATGCActtcatgtatttattgtatgGAGTTTTATGGTTTCTGCAGTTGACACAGGAATGTATGGCAATGTTAAAGTCATGAGTCCGATTTTCAGGaaatgcatgaactgataaaatgcCTAGAAATGCAATGTAAGCATctgataaatgcaaaaatgtaaaaaaaaaaaaaaaaatctatatctgTGCGAATAAAAGGCACtgatttgaaatagaattgTTTTGTAAGATTATATTAAGATGTCTTTACGtttacttttaattcatttaatgcatccttgctgaataaattttactttattaaaataaaaa
>XM_043259120.1
aattatttgagGTTTAATACTTCAGCTTCAACTTATTGCAGACAGCGGCCGGTGCaacgtttatatttttaatatgatgctttaataatttatttcggCTTCATTTCAGAAAACGTATAGATATCAGTGTTTGGTATCAGCAGCAATCGCTGGTTTTGTCTCTTTAATTTTTTCAGGAATGCATAAGTTCTGACAAGGAATTCGTACACACGCGTTCACCTTTAATCTTAATGAAGCCTCACCAATCGTTGCATTCTCCCAGACTCTTATCTTGTAGCGCCCTCCAATGGCTTCCGGTGTCATTGCAGCACGAGTGACGCTTTTAAAACTTGTCGCAAAGCCGGAAGAGAGTCCTGTTTATCTGCCCTGTCATAAATGACACGCTTTGAGAAGCGGGGATATAAATGTTTATGACCATAATGGCATTTTGATTAGGTACTACTGCCCATATGAAGTCATTTATATAAGATACGTGTTGTTTCTGACAGAAGACGGCGGCGGCTGTGATATGGGTTTTCATGTCTTTTTCTATATACCTAATGTAATCGgttaTATACGGATTCTTCTTCTTGTCGTTGCCTGGATTGTGCATCGGGACCCAGGCAGTTTTGTACCCCTGTATTTGTTGTCTGTTATATTGGATGGGGTGGATGGCTGGGCGGCCCGTCGGCTGCAGCAGACGTCCAGGTTCGGAGCGTGGCTGGATGTGGTCATTGACAATGTAGGACGCGGCATGCTCTGGAACATGCTTTACGACTGGGGCTGGCTGGTGTCTTCAGTAGAGtggtgtgtatttgtgtgcaaCCACAATGCCAGAGGTGCTCAGTGGAAGAGCTCGTTCGTGGAGAGCCCGTTTTGGGTGCAGGCAGTGATGGCAAAAGGCTTCAAGACTCCTTTGGGTATTCTGACGATAGCAGGGCTCCATGTTTTACCCGTGTGGCTGTATGGTTTCCAGTACGAGGTGCTGTCGCAGACTCTCTTTTTCCCAAACTGGCTACAGATTCTGGGGATCCTGGTGCTGACAGCGGGGCGATTACTGGGCTTCGCAGTTGAGATGTGGTGCATCGTAACCCATTTGAGATTCTTACTggatgaagaggaagaaaagaagaacTAGCGAATCTCTAACGGTTCATTTAGGATGTAGTAAGGGTTTAGattgaaattcatattttatgagACTTCTGGTCTAAGAAGCAGCTGAAAAAACACTGCATCTATGTTACTGAGCTTGTTGCATGTAATTTATTGAAAACCTATTTATATTTTCTCAAAAACTTATTTTCCTTAATACTGCATTTAAGGATTCTGGCTGTATATGTATTCcttaaatgtagtttataaGAAAGGAAGCTTTTTGCACTGTGACAGTcacattgtatttaaaatgttctttatgcAGCAAATGCActtcatgtatttattgtatgGAGTTTTATGGTTTCTGCAGTTGACACAGGAATGTATGGCAATGTTAAAGTCATGAGTCCGATTTTCAGGaaatgcatgaactgataaaatgcCTAGAAATGCAATGTAAGCATctgataaatgcaaaaatgtaaaaaaaaaaaaaaaaatctatatctgTGCGAATAAAAGGCACtgatttgaaatagaattgTTTTGTAAGATTATATTAAGATGTCTTTACGtttacttttaattcatttaatgcatccttgctgaataaattttactttattaaaataaaaa

Function

symbol description
si:ch1073-145m9.1 Predicted to enable phosphotransferase activity, for other substituted phosphate groups. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: uncharacterized protein LOC104930674

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259119.1 False 1349 mRNA 0.41 6 13560833 13564722
XM_043259120.1 True 1716 mRNA 0.40 6 13561734 13564722

Neighbor

gene id symbol gene type direction distance location
ift20 ift20,LOC107743753,LOC107585565,LOC107683839,LOC107601740,LOC107718287 coding upstream 47338 13511197 ~ 13513495 (+)
sae1 sae1,LOC107683835,LOC107585558,LOC107743692,LOC107690439,LOC107718284,LOC107601738 coding upstream 71722 13480966 ~ 13489111 (+)
klc3 klc3,LOC107743695,LOC107601696,LOC107718297,LOC107690445,LOC107683829,LOC107585554,LOC108425834 coding upstream 106268 13445845 ~ 13454565 (+)
mark4b si:dkey-31m14.7,mark4,LOC107585548,LOC107690446,LOC107683822,LOC107743699 coding upstream 125008 13399809 ~ 13435825 (+)
si:dkey-182i3.10 LOC107743729 coding upstream 167016 13390533 ~ 13393817 (+)
LOC122358501 LOC107690467,LOC107743726,LOC107585604,LOC107664918,LOC107718289 coding downstream 12280 13577002 ~ 13593679 (+)
LOC122358500 LOC107718289 coding downstream 39369 13604091 ~ 13667411 (+)
LOC122359191 LOC107709114,LOC107677520,LOC107586244 coding downstream 187420 13752142 ~ 13756092 (+)
LOC122358866 cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 coding downstream 210342 13775064 ~ 13796845 (+)
pak4 pak4,LOC107743662,LOC107664940,LOC107585589,LOC107685053,LOC107592622,LOC107744790 coding downstream 397731 13962453 ~ 13975188 (+)
G106276 ube4a,LOC107743704,LOC107718272 non-coding upstream 224156 13335308 ~ 13336677 (+)
LOC122358384 NA non-coding upstream 605026 12945077 ~ 12955807 (+)
G106157 LOC107670963,LOC107731150,LOC107586232 non-coding upstream 780458 12773457 ~ 12780375 (+)
G106171 NA non-coding upstream 788763 12771795 ~ 12772070 (+)
G106161 NA non-coding upstream 819756 12738051 ~ 12741077 (+)
G106350 NA non-coding downstream 115458 13680180 ~ 13685449 (+)
G106354 NA non-coding downstream 127657 13692379 ~ 13692893 (+)
G106370 NA non-coding downstream 234579 13799301 ~ 13811099 (+)
G106381 pafah1b1,lis1a,LOC107664934,LOC107743664,LOC107690414,LOC107744786 non-coding downstream 317399 13882121 ~ 13884081 (+)
G106385 NA non-coding downstream 348857 13913579 ~ 13913790 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 712166 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 1463187 12093957 ~ 12097646 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other upstream 1530284 12027555 ~ 12030549 (+)
LOC122358628 NA other upstream 2188142 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 2832438 10721972 ~ 10728395 (+)
G106376 cluh,LOC107685050 other downstream 351851 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 392475 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 1348189 14912911 ~ 14928225 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 2141791 15706513 ~ 15712439 (+)
G107107 NA other downstream 2316392 15881114 ~ 15883510 (+)

Expression


Co-expression Network