LOC122359065


Basic Information

Item Value
gene id LOC122359065
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22853258 ~ 22856816 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259188.1
TGCCGTGAAACGAGAAAGAAGAAGATCGCAATAACGCTAGAAATTGGCAGAAATATGAGAAATATGGAGCTCGTTACTGTCGAAACTGACGACGCGAGTCAGCCGGAACCGAGCGTAATTGAGCATGGAGACACCGAGGAACACACAGaaGGGGAGGACGCGAAGCAGCAAGTGCACGCGCCGAAAGAGAAGGGGAAGGGAAGACGCACCGTCCGAGCTCGAAAAACCAAAGCCGTAAAGCCTCACACCTGCTTCCGGTGCGAGAAGAGCTTCAAGCACAAAGGCCATCTGAACACGCACTTACGAAcgcacaccggagagaaaccgttcaCGTGCAGcgagtgcgggaagagcttcaccCGTTCCGCGGGTCTCAGCAAACACCTGTTCAGTCACTCCGGAGTGAAGCCTTTTATCTGCGACCAGTGCGGTAAAGACTTCGTTACGTGGTCCAAACTAAAAACGCACCTGGACGTTCATTCGGACGAGAGCCCGCACGAGTGCTCCCTGTGCGGGAAGCGTTTTCCGCGACTGGACGCCTTCAAACAGCACCAGAAAATACACAGCGAGGTGAGGGAGCACGCGTGTCCtgagtgcgggaagagcttcaccaCGGCGACTCAGCTGACGCAGCACcggaggatccacaccggagagaaaccgtaccGGTGCTCGCACTGCGGCAAGACGTTCACTCTCTCTGGGAACCTGAAGGCGCACGAGCGGGTTCACACCGGGGAGAAGCCGTATCGCTGCGACCAGTGCGGGGAGACGTTCATAAGCACCAAAACCCTCCGTTACCACATGCACGGGCACTCCGGGGAGCGTCCGTTCGGCTGCGGCCGGTGCGGGAAGAGGTTCAAGTCGGCGTCGAACCTGAAGTGCCACGCGAAGGTCCACCTGGACGAAAAGCCTCACCTGTGCTCCCTGTGCGGGAAGGGCTTTTCCAGGCTGAACAGCTGCAAGGCGCACCAGAGGACGCACGAGGACGCCGGGGAGCAGCACGCTTGCGCggagtgcgggaagagcttcgcCGCCGTCGGCCAGCTGAAGCGGCACGAAAGGGTCCACACCGGGGAGAAGCCGCACAAGTGCGCGTACTGCGACAAGAGCTTCGCCGCGTCCGGGAACCGGAAAGTGCACGAGCGGGTGCACACCGGGGAGAAACCGTACCGCTGCGCCcggtgcgggaagagcttcactCAGTCGAAGAACGTAGCGGTCCACGTGGAAAAGTATTGCTCCGCGTCGCAATGGAGCGTGCCAAAGATGAAAACGAGGGCGCCGGCGATCCAGagttatgcataataaaacttGAAGATACCGAGGATCAAAAAGTCCCAACGAAAGAGCAAGAACGAGAAACGACCGAAGAGGAGGAACGCGGCGACTGTAAAACGCACCAGAAAGCGCACGGCGTGAGAGATCACGTGTGCTTCGAGTGCGGGAAGCGCTTCATCACGGCCGGCCACCTGAGGC
>XM_043259189.1
TGCCGTGAAACGAGAAAGAAGAAGATCGCAATAACGCTAGAAATTGGCAGAAATATGAGAAATATGGAGCTCGTTACTGTCGAAACTGACGACGCGAGTCAGCCGGAACCGAGCGTAATTGAGCATGGAGACACCGAGGAACACACAGaaGGGGAGGACGCGAAGCAGCAAGTGCACGCGCCGAAAGAGAAGGGGAAGGGAAGACGCACCGTCCGAGCTCGAAAAACCAAAGCCGTAAAGCCTCACACCTGCTTCCGGTGCGAGAAGAGCTTCAAGCACAAAGGCCATCTGAACACGCACTTACGAAcgcacaccggagagaaaccgttcaCGTGCAGcgagtgcgggaagagcttcaccCGTTCCGCGGGTCTCAGCAAACACCTGTTCAGTCACTCCGGAGTGAAGCCTTTTATCTGCGACCAGTGCGGTAAAGACTTCGTTACGTGGTCCAAACTAAAAACGCACCTGGACGTTCATTCGGACGAGAGCCCGCACGAGTGCTCCCTGTGCGGGAAGCGTTTTCCGCGACTGGACGCCTTCAAACAGCACCAGAAAATACACAGCGAGGTGAGGGAGCACGCGTGTCCtgagtgcgggaagagcttcaccaCGGCGACTCAGCTGACGCAGCACcggaggatccacaccggagagaaaccgtaccGGTGCTCGCACTGCGGCAAGACGTTCACTCTCTCTGGGAACCTGAAGGCGCACGAGCGGGTTCACACCGGGGAGAAGCCGTATCGCTGCGACCAGTGCGGGGAGACGTTCATAAGCACCAAAACCCTCCGTTACCACATGCACGGGCACTCCGGGGAGCGTCCGTTCGGCTGCGGCCGGTGCGGGAAGAGGTTCAAGTCGGCGTCGAACCTGAAGTGCCACGCGAAGGTCCACCTGGACGAAAAGCCTCACCTGTGCTCCCTGTGCGGGAAGGGCTTTTCCAGGCTGAACAGCTGCAAGGCGCACCAGAGGACGCACGAGGACGCCGGGGAGCAGCACGCTTGCGCggagtgcgggaagagcttcgcCGCCGTCGGCCAGCTGAAGCGGCACGAAAGGGTCCACACCGGGGAGAAGCCGCACAAGTGCGCGTACTGCGACAAGAGCTTCGCCGCGTCCGGGAACCGGAAAGTGCACGAGCGGGTGCACACCGGGGAGAAACCGTACCGCTGCGCCcggtgcgggaagagcttcactCAGTCGAAGAACGTAGCGGTCCACGTGGAAAAGTATTGCTCCGCGTCGCAATGGAGCGTGCCAAAGATGAAAACGAGGGCGCCGGCGATCCAGagttatgcataataaaacttGAAGATACCGAGGATCAAAAAGTTGATAACGTGTTTATTTTAGTCCCAACGAAAGAGCAAGAACGAGAAACGACCGAAGAGGAGGAACGCGGCGACTGTAAAACGCACCAGAAAGCGCACGGCGTGAGAGATCACGTGTGCTTCGAGTGCGGGAAGCGCTTC
>XM_043259190.1
AAACGAGAAAGAAGAAGATCGCAATAACGCTAGAAATTGGCAGAAATATGAGAAATATGGAGCTCGTTACTGTCGAAACTGACGACGCGAGTCAGCCGGAACCGAGCGTAATTGAGCATGGAGACACCGAGGAACACACAGGGGAGGACGCGAAGCAGCAAGTGCACGCGCCGAAAGAGAAGGGGAAGGGAAGACGCACCGTCCGAGCTCGAAAAACCAAAGCCGTAAAGCCTCACACCTGCTTCCGGTGCGAGAAGAGCTTCAAGCACAAAGGCCATCTGAACACGCACTTACGAAcgcacaccggagagaaaccgttcaCGTGCAGcgagtgcgggaagagcttcaccCGTTCCGCGGGTCTCAGCAAACACCTGTTCAGTCACTCCGGAGTGAAGCCTTTTATCTGCGACCAGTGCGGTAAAGACTTCGTTACGTGGTCCAAACTAAAAACGCACCTGGACGTTCATTCGGACGAGAGCCCGCACGAGTGCTCCCTGTGCGGGAAGCGTTTTCCGCGACTGGACGCCTTCAAACAGCACCAGAAAATACACAGCGAGGTGAGGGAGCACGCGTGTCCtgagtgcgggaagagcttcaccaCGGCGACTCAGCTGACGCAGCACcggaggatccacaccggagagaaaccgtaccGGTGCTCGCACTGCGGCAAGACGTTCACTCTCTCTGGGAACCTGAAGGCGCACGAGCGGGTTCACACCGGGGAGAAGCCGTATCGCTGCGACCAGTGCGGGGAGACGTTCATAAGCACCAAAACCCTCCGTTACCACATGCACGGGCACTCCGGGGAGCGTCCGTTCGGCTGCGGCCGGTGCGGGAAGAGGTTCAAGTCGGCGTCGAACCTGAAGTGCCACGCGAAGGTCCACCTGGACGAAAAGCCTCACCTGTGCTCCCTGTGCGGGAAGGGCTTTTCCAGGCTGAACAGCTGCAAGGCGCACCAGAGGACGCACGAGGACGCCGGGGAGCAGCACGCTTGCGCggagtgcgggaagagcttcgcCGCCGTCGGCCAGCTGAAGCGGCACGAAAGGGTCCACACCGGGGAGAAGCCGCACAAGTGCGCGTACTGCGACAAGAGCTTCGCCGCGTCCGGGAACCGGAAAGTGCACGAGCGGGTGCACACCGGGGAGAAACCGTACCGCTGCGCCcggtgcgggaagagcttcactCAGTCGAAGAACGTAGCGGTCCACGTGGAAAAGTATTGCTCCGCGTCGCAATGGAGCGTGCCAAAGATGAAAACGAGGGCGCCGGCGATCCAGagttatgcataataaaacttGAAGATACCGAGGATCAAAAAGTCCCAACGAAAGAGCAAGAACGAGAAACGACCGAAGAGGAGGAACGCGGCGACTGTAAAACGCACCAGAAAGCGCACGGCGTGAGAGATCACGTGTGCTTCGAGTGCGGGAAGCGCTTCATCACGGCCGGCCACCTGAGGC
>XM_043259191.1
TGCCGTGAAACGAGAAAGAAGAAGATCGCAATAACGCTAGAAATTGGCAGAAATATGAGAAATATGGAGCTCGTTACTGTCGAAACTGACGACGCGAGTCAGCCGGAACCGAGCGTAATTGAGCATGGAGACACCGAGGAACACACAGaaGGGGAGGACGCGAAGCAGCAAGTGCACGCGCCGAAAGAGAAGGGGAAGGGAAGACGCACCGTCCGAGCTCGAAAAACCAAAGCCGTAAAGCCTCACACCTGCTTCCGGTGCGAGAAGAGCTTCAAGCACAAAGGCCATCTGAACACGCACTTACGAAcgcacaccggagagaaaccgttcaCGTGCAGcgagtgcgggaagagcttcaccCGTTCCGCGGGTCTCAGCAAACACCTGTTCAGTCACTCCGGAGTGAAGCCTTTTATCTGCGACCAGTGCGGTAAAGACTTCGTTACGTGGTCCAAACTAAAAACGCACCTGGACGTTCATTCGGACGAGAGCCCGCACGAGTGCTCCCTGTGCGGGAAGCGTTTTCCGCGACTGGACGCCTTCAAACAGCACCAGAAAATACACAGCGAGGTGAGGGAGCACGCGTGTCCtgagtgcgggaagagcttcaccaCGGCGACTCAGCTGACGCAGCACcggaggatccacaccggagagaaaccgtaccGGTGCTCGCACTGCGGCAAGACGTTCACTCTCTCTGGGAACCTGAAGGCGCACGAGCGGGTTCACACCGGGGAGAAGCCGTATCGCTGCGACCAGTGCGGGGAGACGTTCATAAGCACCAAAACCCTCCGTTACCACATGCACGGGCACTCCGGGGAGCGTCCGTTCGGCTGCGGCCGGTGCGGGAAGAGGTTCAAGTCGGCGTCGAACCTGAAGTGCCACGCGAAGGTCCACCTGGACGAAAAGCCTCACCTGTGCTCCCTGTGCGGGAAGGGCTTTTCCAGGCTGAACAGCTGCAAGGCGCACCAGAGGACGCACGAGGACGCCGGGGAGCAGCACGCTTGCGCggagtgcgggaagagcttcgcCGCCGTCGGCCAGCTGAAGCGGCACGAAAGGGTCCACACCGGGGAGAAGCCGCACAAGTGCGCGTACTGCGACAAGAGCTTCGCCGCGTCCGGGAACCGGAAAGTGCACGAGCGGGTGCACACCGGGGAGAAACCGTACCGCTGCGCCcggtgcgggaagagcttcactCAGTCGAAGAACGTAGCGGTCCACGTGGAAAAGTATTGCTCCGCGTCGCAGTGAGGGCTCGCGCATTTTTATTCTGGGATTTAAAGTCTCGCCGTGAAGGCAGACGGGCGGGAAACAAACCCAGTTTGAATTggctaattaatttattcataaatggtttatttataCGTGCACTTATTTCTCTTAAACGTACACTTTATGCAGGCTCTGCATTTCGCTGGGAAGACGTGTGTTTATGTAACGTTTTTATAGAAGTGAACGCGTTTCAATGGGAATTGTGGCTTTATTGTTCAGGTGCCAGCTATTGATGTTAATGACTGACCACCCAAATCCTACCAGGTAGAAACATTTCTGGTGTATTTTACACGTTCTTAGTTAGATGTATGCTTTATTTATGGATTTGTTCGAAATATATTAGTTTCCTCGTGTCCATTaaagaaatgtgtttgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259188.1 False 1479 mRNA 0.59 4 22853258 22856816
XM_043259189.1 False 1478 mRNA 0.58 4 22853258 22856794
XM_043259190.1 False 1469 mRNA 0.59 4 22853265 22856816
XM_043259191.1 True 1654 mRNA 0.55 2 22853258 22855074

Neighbor

gene id symbol gene type direction distance location
LOC122358712 NA coding upstream 609 22839191 ~ 22852649 (+)
LOC122359069 NA coding upstream 5380 22844910 ~ 22847878 (+)
LOC122359067 NA coding upstream 15739 22835659 ~ 22837519 (+)
LOC122358711 NA coding upstream 18471 22824063 ~ 22834787 (+)
LOC122359066 NA coding upstream 23329 22827350 ~ 22829929 (+)
cwf19l2 cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834 coding downstream 21036 22877852 ~ 22897674 (+)
gucy1a2 gucy1a2,LOC107566890,LOC107706059,LOC107669873,LOC107725744 coding downstream 51735 22908551 ~ 22937932 (+)
pdgfd LOC107689581,LOC107670136,LOC107756229,LOC107725770 coding downstream 234109 23090925 ~ 23114178 (+)
fzd4 fzd4,LOC107600811,LOC107551868,LOC107725773 coding downstream 400934 23257750 ~ 23262190 (+)
LOC122358508 parl,LOC107670111,LOC107689587,LOC107725764 coding downstream 515844 23372660 ~ 23378269 (+)
G108981 NA non-coding upstream 15136 22837685 ~ 22838122 (+)
G108949 NA non-coding upstream 77685 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 186965 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 204913 22587935 ~ 22648345 (+)
G108986 gria4a non-coding downstream 12759 22869575 ~ 22988641 (+)
G109006 LOC104959606 non-coding downstream 141714 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 184254 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 254740 23111556 ~ 23113058 (+)
G109018 NA non-coding downstream 260013 23116829 ~ 23117749 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 75533 22775649 ~ 22777725 (+)
G108573 NA other upstream 1115571 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1117540 21735014 ~ 21735718 (+)
G108571 NA other upstream 1120151 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1126992 21724404 ~ 21726266 (+)
G108990 NA other downstream 92324 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 98895 22955711 ~ 22959679 (+)
G109132 NA other downstream 389959 23246775 ~ 23271291 (+)
G109193 NA other downstream 652616 23509432 ~ 23510315 (+)

Expression


Co-expression Network