LOC122359066


Basic Information

Item Value
gene id LOC122359066
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22827350 ~ 22829929 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259192.1
CGTCTCCAAGAGACTCAAACTGGAGGAAAACCTTACAAAGTGCTCGTATTGAGAGTCCGGAAACCTCAAGTTTCGTTCAAGTCAAGATCTCTAGTGACTCGTATCaaaaaacattgctctgtgTGGGAGCGAACAAATATATTCagtttcttacttttttttggtaagaTCATTATTTTTCCGCAACGTAAAAGTTGAATAGGATCTGTATGATGATGCAAATAAAATTTGCACTGATAGCTGATTATGTGCAGCATATATTCTGcttggtctttctttctactccATCCGTGTTCCGCACTCCGGCTCAGTAGATGGCGGGAGTGCACCTTTCTGTTTGCCGACCGCCGTGAAAAGACAGCAGATTAAGAAGAAGATCTCACACAGTTAGCGCAGAAAAGCAAAgGGTCACGATGCGAAGACTAAATCCTCACGAGCTGCTATTAGTGCACATAAAGATGAAGTCCTGAAAGATTTTACTCCGTACCAGCTGGTGGTGGAAATGAAGTTAAGACGATTCTAAAGCAACCTAATATATGTGGGTATTTTAAAGTAATCCAGTATAAATCTGGTGGATCTGAGGATCAGACAATGATCACGTCACGCCTACAGTGAAGCCCCTCCCACAACAATTCACCTATAAATACTGGAAATATTCCTATCATCCTACAAGAGAAGAACAAACTCCAGGAGCACTGGCTGAAACCTGTTAAAGATggagtttattaaagaggagattGAAGACATGGGTTATCCAGAACCATCCAGAATAAAACACGAAGATACTGAGGAACAAATAGaCCGGATTGTAGTACAGCAGCAAAGATTGAAGCCGAATGAAGTTAAAAAGGAAGACTGTCAAATGCAAAATTCAAGGAAACCAGCCAAACAGCTGCACACGTGCTCACAGTGCGGAAAGAGCTgcaagaaaaaaggaaaccttaaGAAGCACATGagaatccacaccggagagaaaccgtacaAATGCTCccagtgcggaaagagttttGCCGCAGAATCAAGTTTCAGCTACCATCTGCACGTTCACTCCGGAGAAAAGCCGTTCGGCTGCGATCGGTGCGATAAAAAGTTCATCTCTTCATCGCAGCTCAGAAAGCACCTGACGGTTCACGAGAGGCCTCACGTGTGCTCTTTCTGCGGGAAGACTTTTTCGCGCCTGGAGGGTTATAAGCGGCACCAGAAAAAACACAACGGAGTGAAGGAGCACGTGTGCTGcgagtgcgggaagagctttaATAAAGCTGTTGATCTGAAGCGGCACCAAATGATCCACACCGGGGAAAGACCGTACAAGTGCTCGTACTGCGACAAGAGCTTCACTCGGCCCGGAAGCCTGAAAACTCATCACCgcgttcacaccggagagaagccgtatCGATGCGCTCAGTGCGGAGAGAGCTTCAAAAACGCGTCGAGCCTCAGGAATCACCTGCTCGTTCACTCCGGAGAAAAGCCGTTCGGCTGCGACCAGTGCGGGAAAAAGTTCAAATCGTCGTCGCATCTAAAAATTCACCTGATAGTTCATTCGGACGAGAAGCCTCACGTGTGCTCTTACTGCGGAAAGAGCTTCGCGAGACTGTATAGCTGTAAGCAGCACCAGAAAACGCACAACGAGAAAAACGACGTAAAAGTTTTGTATAATGatgcaaataaaatttaatcaaatattcgATACCACAGACTGTATATAGGTTGATTTCCGCTATTAAATCAAGGTTCACgttcattttttcacatttatccacttttaaattaaaaactactgtatttttatggttAATAAACTGTGTACtgtta
>XM_043259193.1
tgttttgttgttctgttgCGTTAAACGTTTGACATTCTTAAACATTATTCGTTGTAATCGGTGCTTTTTCGCTTTTGTCGCTCTGACTGCGCGCGTGCCCGCTCTGCGCTCGCGCTCAATGATGTTTGTGTGGGGAACTGCGGTTTAGTTTTATGATGAATAGATGATGTCAGgcagcactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagaccTGTGCCATcagattaaatcaaataaaaacataaagaaatcaaatgcattaatgcaCAAAATGAGTAGCCTTTGCACGGTGCACAGTTTTTCTTCCCCCCctttagttaatgttaactgCATTACAGCCTATATTTGGTGTGgtcctgttttatttcatttatagacttaaattgtttttgtcCATGCTGCAGGGTCACGATGCGAAGACTAAATCCTCACGAGCTGCTATTAGTGCACATAAAGATGAAGTCCTGAAAGATTTTACTCCGTACCAGCTGGTGGTGGAAATGAAGTTAAGACGATTCTAAAGCAACCTAATATATGTGGGTATTTTAAAGTAATCCAGTATAAATCTGGTGGATCTGAGGATCAGACAATGATCACGTCACGCCTACAGTGAAGCCCCTCCCACAACAATTCACCTATAAATACTGGAAATATTCCTATCATCCTACAAGAGAAGAACAAACTCCAGGAGCACTGGCTGAAACCTGTTAAAGATggagtttattaaagaggagattGAAGACATGGGTTATCCAGAACCATCCAGAATAAAACACGAAGATACTGAGGAACAAATAGaCCGGATTGTAGTACAGCAGCAAAGATTGAAGCCGAATGAAGTTAAAAAGGAAGACTGTCAAATGCAAAATTCAAGGAAACCAGCCAAACAGCTGCACACGTGCTCACAGTGCGGAAAGAGCTgcaagaaaaaaggaaaccttaaGAAGCACATGagaatccacaccggagagaaaccgtacaAATGCTCccagtgcggaaagagttttGCCGCAGAATCAAGTTTCAGCTACCATCTGCACGTTCACTCCGGAGAAAAGCCGTTCGGCTGCGATCGGTGCGATAAAAAGTTCATCTCTTCATCGCAGCTCAGAAAGCACCTGACGGTTCACGAGAGGCCTCACGTGTGCTCTTTCTGCGGGAAGACTTTTTCGCGCCTGGAGGGTTATAAGCGGCACCAGAAAAAACACAACGGAGTGAAGGAGCACGTGTGCTGcgagtgcgggaagagctttaATAAAGCTGTTGATCTGAAGCGGCACCAAATGATCCACACCGGGGAAAGACCGTACAAGTGCTCGTACTGCGACAAGAGCTTCACTCGGCCCGGAAGCCTGAAAACTCATCACCgcgttcacaccggagagaagccgtatCGATGCGCTCAGTGCGGAGAGAGCTTCAAAAACGCGTCGAGCCTCAGGAATCACCTGCTCGTTCACTCCGGAGAAAAGCCGTTCGGCTGCGACCAGTGCGGGAAAAAGTTCAAATCGTCGTCGCATCTAAAAATTCACCTGATAGTTCATTCGGACGAGAAGCCTCACGTGTGCTCTTACTGCGGAAAGAGCTTCGCGAGACTGTATAGCTGTAAGCAGCACCAGAAAACGCACAACGAGAAAAACGACGTAAAAGTTTTGTATAATGatgcaaataaaatttaatcaaatattcgATACCACAGACTGTATATAGGTTGATTTCCGCTATTAAATCAAGGTTCACgttcattttttcacatttatccacttttaaattaaaaactactgtatttttatggttAATAAACTGTGTACtgtta

Function

GO: NA

KEGG:

id description
ko03022 Basal transcription factors

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259192.1 False 1818 mRNA 0.44 4 22827350 22829929
XM_043259193.1 True 1840 mRNA 0.44 3 22827872 22829929

Neighbor

gene id symbol gene type direction distance location
lrrc51 LOC107706076,LOC107558849,LOC107670099,LOC107669906 coding upstream 14080 22808780 ~ 22813270 (+)
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding upstream 62388 22751534 ~ 22764962 (+)
tyr tyr,LOC107670098,LOC107669900 coding upstream 96154 22714506 ~ 22731196 (+)
actn4 actn4,LOC107669904,LOC107570110,LOC106612603 coding upstream 210597 22572491 ~ 22616753 (+)
zgc:85932 NA coding upstream 257559 22547353 ~ 22569791 (+)
LOC122359067 NA coding downstream 5730 22835659 ~ 22837519 (+)
LOC122358712 NA coding downstream 9262 22839191 ~ 22852649 (+)
LOC122359069 NA coding downstream 14981 22844910 ~ 22847878 (+)
LOC122359065 NA coding downstream 23329 22853258 ~ 22856816 (+)
LOC122358713 NA coding downstream 26548 22856477 ~ 22857439 (+)
G108949 NA non-coding upstream 51777 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 161057 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 179005 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding upstream 198238 22619676 ~ 22629112 (+)
G108762 NA non-coding upstream 294123 22532872 ~ 22533227 (+)
G108981 NA non-coding downstream 7756 22837685 ~ 22838122 (+)
G108986 gria4a non-coding downstream 39646 22869575 ~ 22988641 (+)
G109006 LOC104959606 non-coding downstream 168601 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 211141 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 281627 23111556 ~ 23113058 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 49625 22775649 ~ 22777725 (+)
G108573 NA other upstream 1089663 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1091632 21735014 ~ 21735718 (+)
G108571 NA other upstream 1094243 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1101084 21724404 ~ 21726266 (+)
G108990 NA other downstream 119211 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 125782 22955711 ~ 22959679 (+)
G109132 NA other downstream 416846 23246775 ~ 23271291 (+)
G109193 NA other downstream 679503 23509432 ~ 23510315 (+)

Expression


Co-expression Network