LOC122359069


Basic Information

Item Value
gene id LOC122359069
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22844910 ~ 22847878 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259196.1
CATCCGGGTACCAAGCATCCGGGCCACCGTAGTTTTCAGGAGCCGATCACGTGACGAGACAGCCAATCAAATCACAGCTAAATAAAACCCAGTGTAGTTTTGCTCCTCCAGAGAGATTCCTGTTGAAGTTGTGTGCGTTAATGACTAAAAACCACATATGCCAATCTGTTAAATTAACTGGAGTTCCTGTCTTCGACGCGCCGTGGACGTGACGGAGGACACCTGAGGACCAGAAAACACCACAATTTATCTTTGAAAACCTCCAAACTGAGCCCAAACCAGTCCACACTGCCGATCAGCTGAATGTGCAAGTAGCAgctatgtaaaaatgttttatatatactataaaaggGTACATTGGGCAGAAAACATTTGATGTATTTAAGTCgcattttctgtatatttttatttttggactgATAATAAAGTCGAAGAGGGAGCCGGCGGTAATGCCAGTGTGTTCAGTTTTAGACAAGTTCATCTTCGGCTGCTCCTGACCAGGTTGAGCTATGATCATTTTGCTTTTGGAAACCAAATCAAGTGAAAATAAGTCAATTACGTGCATAAGCCTGGCTGATTTGGTAACCTAGTTTTATGAAGCCCCGGTCCTGTGGGCCTCAGTATCAGACAATGATCACGTCACGCCTACAGTGAAGCCCCTCCCACAACAATTCACCTATAAATACTGGAGAAGATTCACTTCATCCTACAAGAGAAGAACGAACTCCAGGAGCAGCGGCTGAAATCTGTTAAAGATggagtttattaaagaggagattGAAGACATGGGTTATCCAGAACCATCCAGAATAAAACAGGAAGATACTGAGGAACAAATAGGCTTGGCTGAAGTAAAACAGGAAAGAATGAAGCTGAAAGAAGAGGAGGGGTGTGGAAAAAGCAAAACGTCAAGAAAAAATAATTCCGAACAGCTGAAAACGCACGAGAGAAAACGCGCGCACGTTCCCGCCGGAGAGAAGCGGTATCGCTGCGCTCAGTGCGGAAAGAGTCTTTCCGGAGCGTCGAGTCTCAGGAATCACCTGCTCATTCACTCCGGAGAAAAGCCGTTCGGCTGCGACCGGTGCGGGAAAAAGTTCATCTCGTCGTCGCACCTGAAAAGTCACATGACCGTTCATTCGGACGAGAAGCCTCACGTGTGCTCTTACTGCGGAAAGAGCTTTTCGTGGCTGGCCAGTTACAAACATCATCAGAAGACGCACAGTAAAGTGAAAGACCACGTGTGCCGcgagtgcgggaagagcttcactAGAATAGCCAATCTGAAGCAGCACCAGAGGATACACACCGGAGAGAGGCCTTACAAGTGCTCGTACTGCGACAGGAGCTTCAATGAGTCTGGAAACCTGAAAAGGCATCAGCgcgttcacaccggagagaagccgtacTACTGCACTCAGTGCGGGAAGTGTTTCACTCAGTCGCCAAATCTAGTGATTCATATTAAAAAGTGCATTGAAAAGTTCACGGTAAAGAGGCGCAAGATGGCAGGCAAGGAGTACTAGGCGCTCGCCAGCTCTTAACTCGACCCTTTAGCCGAGGTCGTACGTATTCATTGTCAGCGACTGGAGACTTGCAAGACTCGTCTGGATAAAGGCCAAACGAAGaaagtcatcatttactgatcATGCATACGATCTAGGGAACAGAAGACGCATTCTCGGTTTACCAGAAGGGGCAGATCTAATACGGCGCCATTTCTCCACAAATGGATAGTTGCAGACTAAAACGAGGCCACATCAAGATAGAAAGGGCCCCCAGACCAGGTGTCGAGGAGAGACCAAGACAGATGCTAGTGCGCGAGTTCTGGGAAAAACGAGGACTCTTGCCGCGAGTAAAAAGTTCTGCGGTTTTGAGAACAGCAGCGTAGCTTTGCATCAAGGCGTCTCCTTGGGATCGAAGCCGCTATGCAATGTCATACGAGTAACGATCGGGAACACCACCAAAGTCTCAGAGTTCATCCTCCTCAGGACCGCTCTGTGACTGGATCTTGTAATCGAGGTTGGCCTTCCCTCGATGAGCTCCTGAGTGAGGGCTTTAACGTGTCCCCCGTCCCCTTCCCTGTCGGTCCGTGACATCCCGCATTTCTTACTGTGCTACGGTTGCTGTTATGATTTtgttatgcatttttgtttattccaTCGTCTGTCTGACTGgccttatttattttgcagccTGCAAAGCTTCGGCCTTGGTGGTAGCTTTTATTAAAGAGCATGAAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259196.1 True 2244 mRNA 0.47 3 22844910 22847878

Neighbor

gene id symbol gene type direction distance location
LOC122359067 NA coding upstream 7391 22835659 ~ 22837519 (+)
LOC122358711 NA coding upstream 10123 22824063 ~ 22834787 (+)
LOC122359066 NA coding upstream 14981 22827350 ~ 22829929 (+)
lrrc51 LOC107706076,LOC107558849,LOC107670099,LOC107669906 coding upstream 31640 22808780 ~ 22813270 (+)
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding upstream 79948 22751534 ~ 22764962 (+)
LOC122359065 NA coding downstream 5380 22853258 ~ 22856816 (+)
LOC122358713 NA coding downstream 8599 22856477 ~ 22857439 (+)
cwf19l2 cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834 coding downstream 29974 22877852 ~ 22897674 (+)
gucy1a2 gucy1a2,LOC107566890,LOC107706059,LOC107669873,LOC107725744 coding downstream 60673 22908551 ~ 22937932 (+)
pdgfd LOC107689581,LOC107670136,LOC107756229,LOC107725770 coding downstream 243047 23090925 ~ 23114178 (+)
G108981 NA non-coding upstream 6788 22837685 ~ 22838122 (+)
G108949 NA non-coding upstream 69337 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 178617 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 196565 22587935 ~ 22648345 (+)
G108986 gria4a non-coding downstream 21697 22869575 ~ 22988641 (+)
G109006 LOC104959606 non-coding downstream 150652 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 193192 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 263678 23111556 ~ 23113058 (+)
G109018 NA non-coding downstream 268951 23116829 ~ 23117749 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 67185 22775649 ~ 22777725 (+)
G108573 NA other upstream 1107223 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1109192 21735014 ~ 21735718 (+)
G108571 NA other upstream 1111803 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1118644 21724404 ~ 21726266 (+)
G108990 NA other downstream 101262 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 107833 22955711 ~ 22959679 (+)
G109132 NA other downstream 398897 23246775 ~ 23271291 (+)
G109193 NA other downstream 661554 23509432 ~ 23510315 (+)

Expression


Co-expression Network