ppp2r1bb (ppp2r1b,ppp2r1a,LOC107601716,LOC107717285,LOC107657255,LOC107709127,LOC108436518)


Basic Information

Item Value
gene id ppp2r1bb
gene name ppp2r1b,ppp2r1a,LOC107601716,LOC107717285,LOC107657255,LOC107709127,LOC108436518
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12613981 ~ 12624657 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259225.1
CCTGCGCGGCGAGCGGAAATCAAGCAGCACAACGCCTCTGCGGTGATCATCCAGGTCTAAAATGGCAGGAGCAGAGGGAGACGATTCGCTTTATCCCATCGCGGTTTTAATCGATGAATTGAGAAATGAAGACGTTCAGTTACGCTTGAACAGTATTAAGAAGTTGTCCACTATTGCTCTGGCACTGGGTGTGGAAAGAACACGGACCGAACTACTGCCATTCCTTACTGACACCATATATGATGAGGATGAGGTTCTCCTTGCCTTGGCTGAGCAGCTCGGGAGCTTCACTGTACTGGTTGGAGGCCCAGAGTTTGTGCACTGTCTCCTGCCTCCCCTCGAGAGTTTGGCCACAGTGGAGGAAACGGTTGTGCGGGACAAGGCTGTGGAGTCTCTGCGAAAGATCTCTCAGGAACATTCCCCCGTAGACCTAGAGGTGCATTTTGTACCGCTCGTGAAGCGCTTGGCCAGCGGGGACTGGTTCACCTCCCGAACGTCTGCGTGCGGGCTGTTCAGCGTCTGCTACCCTCGTGTTTCCAGTACAGTTAAAGCGGAAATCCGTCAGCACTTCCGCACGCTTTGCTCAGACGACACTCCCATGGTGCGCCGAGCCGCCGCCTCGAAGCTGGGAGAGTTTGCGAAGGTTCTGGAGCTGGACTATGTTAAGAGTGACATAATTCCTCTCTTTACAGCGCTAGCATCTGATGAGCAGGACTCTGTGCGTCTCTTGGCAGTGGAAGCTGGCGTCAGCATCGCTACTCTGCTGCCACAGGAAGACTTGGAGGCCCTGGTTATGCCCACTTTACGTCAGGCTGCAGAGGACAAGTCCTGGAGGGTGCGCTACATGGTGGCAGACAAGTTCTCAGAATTGCAAAAAGCAGTTGGCCCAGAGATCACCAAGAACGATCTGGTCCCGGCGTTCCAGAACTTGTTGAAAGACTGCGAGGCAGAGGTCCGGGCCGCTGCTGCCAACAAGGTGAAAGTATTCTGTGAAAATTTGCCTGAAGACAGCAGGGAGACCATCATCATGACTCATCTTCTGCCATGCGTCAAGGAGCTGGTGTCTGACACAAACCAGCATGTGAAGTCTGCCTTGGCTTCTGTCATCATGGGTCTCTCTACCATCTTGGGCAAGGACAACACCGTCGAACATCTGTTGCCTCTTTTCCTGGTCCAACTGAAGGACGAGTGTCCTGAGGTGCGTCTGAACATCATCTCTAATCTGGACTGTGTGAATGAGGTGATCGGGATTCGGCAGCTCTCTCAGTCTTTGCTGCCAGCTATAGTAGAGCTGGCTGAGGATGCCAAGTGGAGGGTTCGACTGGCCATCATTGAGTACATGCCTTTGCTGGCTGGCCAACTGGGAGTGGAGTTCTTCGATGAGAAGTTGAACTCCCTGTGCATGGCATGGCTTATTGATCATGTGTTTGCCATCCGAGAGGCTGCCACCTGCAACCTCATGAAGCTGGTGGAGAAGTTTGGAGCAGAATGGGCCCAGAACACCATTGTGCCCAAAGTCCTTGGCATGGCCAATGATTCTAACTACCTGCACAGGATGACTACTCTCTTCTGCATCAATgCTCTGTCTGAAGTATGTGGACAGGAAATCACCACCAAGCACATGTTGCCTGTAGTCCTCAAGATGTCTACTGATCAGGTGGCTAACGTGCGCTTCAATGTGGCCAGGTGCTTACAGAAGATCGGACCAGTTTTGGACAGCAGTGCTTTGCAGGCCGAGGTTAAACCAGTCCTGGAGAAACTAGCTACAGACCAAGATATGGATGTGAAGTACTTTGCTCTAGAGGCTATAAGTGTTCTGGCCTTGGATTGACCGACTTCCTCACCACATCCAGCGAAAAACTGACAACACAAGACCtgttgcattatatttattgttcattttgaatgattaaGTATCGTCGTTGTGTTCTTGTTTACTCTCAAAGATATTGAATGATCAAAGGATGGACTTTGACTATCAAGTTTTACCTCAACCATTGTTAGCGCAGCTAAGCTCTGCATGCTTGTACAATTCACGCATAGCTCTTCGCGAAAGTCACCCATGAGCCATTCCAGTGCAATCGTATCGGAATCGGTACATGCCTGCTTCAGCATGCCGTTAGCTTTTCTTAGACTGTAGCTCATCCTGCCAGTAGCAGATGGTGCGAAATGCctgtttatttgctttagtAGATTTGCTAGCGCACAGCACATTGTTTACATGTGTTCCCTCTctagagggggaaaaaaaaatctcatgtgCTCACACGGTTTAACCGCAGAGTCCTCCGTGTGCACGGGGCAGATTGTGTTCTGAGCACATGGTTAGATTGCAGTCTCTCTAGAAATTGGCTGTACGCACCGTAGTCACACCTTTTATCATGAGCTTTTTTCCATCTAGGGACCATATAATTGAATCAGTTGTGCCGCAACACGGAAGCACGTCTGAGGCATCAACTCACGCCGTTTTGCCTGCATTTATGCGCTCATGAATAGCCCCCGTTCATAAACGTAGATTTTCTCGAACTTTTGTGCCAATTAAATATCTAGTTATAATACGATTTTGTACGTTTTTCGATTATACGTTTTTCTCGTTTAGGTGTAAGGCATGTTAAAAATGTGGTCGTGTCATGAAATCATTCGGCTGGTGCGGAGGAGTATCGTTTCGTGGCACGTAATTCAGCAATATTCTTTGTTACAAACAACTTGCGTTTACTGAATCGTGAGGAAACCCTTTGTTCATGTTCAATATCATGAGAAttctaatgttttgtttttgttttaactcCTTTGGGACATCGGTGTACTTTTGGGACTAAATAAAGTCAGTTGAACTACGTA

Function

symbol description
ppp2r1a Enables protein antigen binding activity and protein heterodimerization activity. Involved in chromosome segregation. Located in chromosome, centromeric region and nucleus. Part of protein phosphatase type 2A complex. Implicated in autosomal dominant non-syndromic intellectual disability 36.
ppp2r1b Predicted to enable protein phosphatase regulator activity. Involved in apoptotic process involved in morphogenesis and positive regulation of extrinsic apoptotic signaling pathway in absence of ligand. Located in membrane raft.

NR:

description
serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like

GO: NA

KEGG:

id description
K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259225.1 True 2841 mRNA 0.49 15 12613981 12624657

Neighbor

gene id symbol gene type direction distance location
nkapd1 zgc:162339,LOC107717266,LOC107657245,LOC107601701,LOC107670955,LOC107709109,LOC107586236 coding upstream 10221 12601165 ~ 12603760 (+)
ubash3bb ubash3bb,LOC107677523,LOC107709118,LOC107586242,LOC107601707,LOC107657259,LOC108436514,LOC108278382 coding upstream 195670 12404837 ~ 12418311 (+)
LOC122359162 gkup,LOC107709108,LOC107717281,LOC107657260,LOC107586304,LOC108436512 coding upstream 209288 12397761 ~ 12404693 (+)
usf1 usf1,LOC107601709,LOC107657261,LOC107717282,LOC107586305,LOC107677518 coding upstream 216833 12391134 ~ 12397148 (+)
ulk2 ulk2,LOC107662799,LOC107729108,LOC107717276,LOC107657566 coding upstream 370748 12215249 ~ 12243233 (+)
LOC122359172 LOC107709130,LOC107586283,LOC107601702,LOC107657248,LOC107717258 coding downstream 42574 12667231 ~ 12675522 (+)
si:dkey-103g5.4 si:dkey-103g5.4,LOC107670965,LOC107657243,LOC107601718,LOC107717267,LOC107717259 coding downstream 55613 12680270 ~ 12701805 (+)
ttc12 LOC107709098,LOC107670956,LOC107717260,LOC107601681,LOC107657228 coding downstream 78793 12703450 ~ 12716484 (+)
LOC122359478 LOC107709099,LOC107586280,LOC107657254,LOC107657227,LOC101882848 coding downstream 93403 12718060 ~ 12726273 (+)
ankk1 ankk1,LOC107670957,LOC107709133,LOC107657242,LOC107717268,LOC107586301,LOC107601704 coding downstream 103299 12727956 ~ 12733428 (+)
LOC122358874 NA non-coding upstream 32179 12580364 ~ 12581802 (+)
G105987 NA non-coding upstream 74539 12538531 ~ 12539442 (+)
G105910 LOC107586245,LOC107709114,LOC569025 non-coding upstream 232268 12366246 ~ 12381713 (+)
G105911 NA non-coding upstream 247822 12363615 ~ 12366159 (+)
G105951 NA non-coding upstream 250429 12363118 ~ 12363552 (+)
G106161 NA non-coding downstream 113394 12738051 ~ 12741077 (+)
G106171 NA non-coding downstream 147138 12771795 ~ 12772070 (+)
G106157 LOC107670963,LOC107731150,LOC107586232 non-coding downstream 148800 12773457 ~ 12780375 (+)
LOC122358384 NA non-coding downstream 320420 12945077 ~ 12955807 (+)
G106234 NA non-coding downstream 633579 13258236 ~ 13798248 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 516335 12093957 ~ 12097646 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other upstream 583432 12027555 ~ 12030549 (+)
LOC122358628 NA other upstream 1241290 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 1885586 10721972 ~ 10728395 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 2223381 10353161 ~ 10390600 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 212925 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 1291916 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 1332540 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 2288254 14912911 ~ 14928225 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 3081856 15706513 ~ 15712439 (+)

Expression


Co-expression Network