XLOC_006697 (tmem72)


Basic Information

Item Value
gene id XLOC_006697
gene name tmem72
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30704361 ~ 30713236 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012904
ACTGCGGCTCAAAATACCAGATTACTTACCATGCAGCTGTGCTGGCACTGCCATCTTTGACTTTCTTTCTAAACTgtcaaaaaataaactattgataGAGAACATTAGCTGTAATCAAATGTGCTAAAGGCAAAAGCATCTCATTTCGGCCATGAAGGGCTCAGCTTTGTGGGTAATTGTGGAATGTTCCTGCAGAGTACTCGGCATCTCCACTGCAGCAGttTTGTGTGCAGTGGGTATAGAGACTCAGAGTCAGGGAGAGTTCACCAGTTTGGCCGTTTATCTCCTACTGTCCTCGCTGGTGATTATGATTTTTGAAGTCGCCTATTTTATTGACGCTCTGTTGGCTACATGTCTTCCTTGTCCACCAACTTGGAAGATGTTCATTCTTTGGAAGAAGATGGCCAAAGTTGGAGGTTTTCAAAAATTCCTGTACTACACAATGATGTCTGTGATGTGTTTCCTGCATCCGGTGCTTGTATGGCATGCTGTGATTCCAGGGATTATGCTGGTTGTGACCGGATTCTTTAACTTCATACTGAGCAAAAAAAAGAAGTCAGATGTGCCTAAAGAGTCCAGAGTTTTCTATGGTGACCCGGCTCTGTCTTCTGTCTGTGTCAAAGATAGAGGAGACTCTGAAGACACGTTCTCTTTCTTTAACGTCATCTCCGGCAAAAGAGCATCTTTTATTCCTAACAACAGCCGAATTCATGACTTAACAGACAGGGATCAGTCATTGAAGAATGGTCAACACAAgaaaagacaaacagacagaaggAATGTGCACTTTATTAAGAGCCTCAGAAGTAATGATACTGAAATGGAAGAATATCATGAGGTGGAATCAGAGGAGACCACATCAGATAAAGCACCAATGATTACACTAGTgagctgctggaaaaaaaaa
>TCONS_00012905
ACTGCGGCTCAAAATACCAGATTACTTACCATGCAGCTGTGCTGGCACTGCCATCTTTGACTTTCTTTCTAAACTgtcaaaaaataaactattgataGAGAACATTAGCTGTAATCAAATGTGCTAAAGGCAAAAGCATCTCATTTCGGCCATGAAGGGCTCAGCTTTGTGGGTAATTGTGGAATGTTCCTGCAGAGTACTCGGCATCTCCACTGCAGCAGACTGTCCTCGCTGGTGATTATGATTTTTGAAGTCGCCTATTTTATTGACGCTCTGTTGGCTACATGTCTTCCTTGTCCACCAACTTGGAAGATGTTCATTCTTTGGAAGAAGATGGCCAAAGTTGGAGGTTTTCAAAAATTCCTGTACTACACAATGATGTCTGTGATGTGTTTCCTGCATCCGGTGCTTGTATGGCATGCTGTGATTCCAGGGATTATGCTGGTTGTGACCGGATTCTTTAACTTCATACTGAGCAAAAAAAAGAAGTCAGATGTGCCTAAAGAGTCCAGAGTTTTCTATGGTGACCCGGCTCTGTCTTCTGTCTGTGTCAAAGATAGAGGAGACTCTGAAGACACGTTCTCTTTCTTTAACGTCATCTCCGGCAAAAGAGCATCTTTTATTCCTAACAACAGCCGAATTCATGACTTAACAGACAGGGATCAGTCATTGAAGAATGGTCAACACAAgaaaagacaa

Function

symbol description
tmem72 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM72 (transmembrane protein 72).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-175 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM72 (transmembrane protein 72).

Ensembl:

ensembl_id ENSDARG00000069332

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012904 False 907 mRNA 0.42 6 30704361 30713236
TCONS_00012905 True 699 mRNA 0.42 4 30707322 30713236

Neighbor

gene id symbol gene type direction distance location
XLOC_006695 rassf4a coding downstream 3901 30664819 ~ 30700460 (-)
XLOC_006696 CT025887.2 coding downstream 18448 30684186 ~ 30685913 (-)
XLOC_006694 si:dkey-275b16.2 coding downstream 41958 30655172 ~ 30662403 (-)
XLOC_006692 zcchc24 coding downstream 58396 30579260 ~ 30645965 (-)
XLOC_006693 CT025887.1 coding downstream 72142 30632105 ~ 30632219 (-)
XLOC_006698 NA coding upstream 95727 30808963 ~ 30812183 (-)
XLOC_006699 CR762493.2 coding upstream 142083 30855319 ~ 30872439 (-)
XLOC_006700 wdfy4 coding upstream 271811 30985047 ~ 31008275 (-)
XLOC_006701 wdfy4 coding upstream 302311 31015547 ~ 31017960 (-)
XLOC_006702 wdfy4 coding upstream 311475 31024711 ~ 31025505 (-)
XLOC_006471 BX537274.2 misc downstream 20439456 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 29878136 825904 ~ 826225 (-)
XLOC_006691 NA non-coding downstream 133218 30568567 ~ 30571143 (-)
XLOC_006690 NA non-coding downstream 152852 30549409 ~ 30551509 (-)
XLOC_006689 NA non-coding downstream 453797 30245673 ~ 30250564 (-)
XLOC_006682 NA non-coding downstream 718859 29984877 ~ 29985502 (-)
XLOC_006703 BX005005.3 non-coding upstream 329278 31042514 ~ 31051156 (-)
XLOC_006704 BX005005.2 non-coding upstream 339300 31052536 ~ 31061816 (-)
XLOC_006705 BX005005.1 non-coding upstream 362597 31075833 ~ 31075947 (-)

Expression


Co-expression Network