LOC122359191 (LOC107709114,LOC107677520,LOC107586244)


Basic Information

Item Value
gene id LOC122359191
gene name LOC107709114,LOC107677520,LOC107586244
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13752142 ~ 13756092 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259453.1
GGACGAGCAGCCTTTGAGATAAAGACACAGTCAAAGATTTGTTCATAGTGTGTTCTGCACGATCAGTCTTCATCATGGCTTTCAATGCGCTGTGTATTTGGAAAGGGCTCCTTTTAGTTTCTTTCATCTTCCTTTCTGTCCATGGACAAGTCTCAAGGCCATCTTTCATGGTGACGTTTCCTGTAGTGATCGAGTCAGGATCTGAAGCTAAACTGTGTGCAAGTCTTCTCAATCCCAATGAAAGCCTCGTCATGAACATTTATCTGGTTCATGGTGACCAGAGCACTTTACTGCTACAGGAGAAAGCTGAGGAAGAATTTCACCGCTGCTTTAACTTTAAGACACCTCTGGTAGAAGCAGAATCAGTGCAGACAATTAAGGTGGAACTTCAGGGAAAGAACTTCAAGATGACTGAAGAGAGAAAAGTCATGCTGAGACGTTACAATAACTTGACATTCATCCAGACTGATAAACCCATCTATATTCCAGGACAGACAGtacatttcaGAGTTGTCACCATGGATAGAAATTTTGTTCCCTTTGATCAAAAGtacaGTAAAGTCTTGCTAGAGGACAGTAAGAATAACAGGATTGGTCAGTGGACAAATATTTCCTCAACAAGGTGGATATTGCAGCTTTCTCATGAGTTGAACCCAGAGGCCCGTCAAGGCATTTATAAGCTAGTCGCTTATATTGGTGAACTGTCTATGCAACATTACTTTGAGGTGAAGAAGTATGTTTTACCCaagtttgaaatgacaataaatccTCCAAAAGAAATAAGTTTTGGTGCTAGTGACATGACTATGGAGGTTTGTGGAAAATACACATTTGGTAAACCAGTGGCTGGTAAAGCAAGAGTGGAAGTATGCCgggaacatttaaaatatattactgacATAGACTTGATTTCACCATGTTTGGCTGAAACTGCTGAGATGAGTGCAACGGGCTGCGCCTTCTTTACTTTGGACACATTGGTCTTTTTTAACTCGACACATGagagatttttaaaagaacaactTACTGTAACAGTGAAAGTGAAAGAAGAAGGAACAGAAAACACAATGGAGAAATCTGAAACTATAAGTCTGACGTATGAAATCGGTAAAGCTATGTTTACTGATCTACCCAAATTTTATGAACATGGGGCAGTTATACAGGGAAAGattaaattagaaaatttaAATGGAGTACCTCATGAAAACAAAGATGTTTATCTTTTGGAGGGTAAAAGGTGGTCTTCAAAACTGCTCCTAAATCTCACTACAGACCGTGATGGACTGGCCAGCTTCTCTCTGAATACATCTAGTCTTTCTAAAAAAGACATTAATCTGATGGCAAGTGCATATCCAAAGTTTCAATATCAAAGCTTTAAAAGTCCTTACTTctctacagaagaaaaaactgtTCAGATTCTCCGACCTGCCACTCCGTACACCCCAACATTAAGTGAATTGATTATAGAGAAAAATGAGCAACCATTAAAGTGTGATGCTGAGTTTACAGTGAacataaagtattattttgttGGAGAGACTGTTGAAGACTTCAAAACTGACATTGTCTATATGGTCTTATCCAGAGGAGTGATTGTTCATCACGGATATGAGAAAGTTGAAGTGAAGTCTTCTAATGGAGCAGCAAGTGGCACAGTGTCATTCAGACTGTCTGTTGGTGCAGATCTGGCTCCTGCTGTGAATGTTCTGGCCTACTGTGTTCTGcccagtgaaaatgttgttgCTCATAGCAGACTATTCAGAACTGAgaagtgtttaaaaaatgagGTGTCTCTGCAGTTTTCTCCTCTTAAAGCAGTTCCTGGTGAGAAAAACACTCTCCAGCTCTCAGCTGAACCTGGTTCTCTGTGCGCCCTCACTGCTGTAGATCAGAGCATCTTGATCCTGGAGTCAGGAAAACGTCTAGATACTGACAAGCTCTTTAACCGGTTGCCAGTACAGATTTTAACAGGTTATCCTTATAATACTGTGGATACACCAGAGTGCCTGGAAATTAGACCTCGTCGGGCTGTGTCACTAGACCATGTTTATGAAAGCTTGAAGAATGCGGGAGTGAAGATGGCAACAAATTTGCATGTGAGACAACCCCTTTGTCTGACATACTATGGTGTAACTTATAACAGAGCTTTTCACTTAGGTACGTctaatttgttatataataatgttttgttgttatatatagGCCTAAATTgcagaaaagtttaaaatgtatgcaatatc
>XM_043259454.1
GGACGAGCAGCCTTTGAGATAAAGACACAGTCAAAGATTTGTTCATAGTGTGTTCTGCACGATCAGTCTTCATCATGGCTTTCAATGCGCTGTGTATTTGGAAAGGGCTCCTTTTAGTTTCTTTCATCTTCCTTTCTGTCCATGGACAAGTCTCAAGGCCATCTTTCATGGTGACGTTTCCTGTAGTGATCGAGTCAGGATCTGAAGCTAAACTGTGTGCAAGTCTTCTCAATCCCAATGAAAGCCTCGTCATGAACATTTATCTGGTTCATGGTGACCAGAGCACTTTACTGCTACAGGAGAAAGCTGAGGAAGAATTTCACCGCTGCTTTAACTTTAAGACACCTCTGGTAGAAGCAGAATCAGTGCAGACAATTAAGGTGGAACTTCAGGGAAAGAACTTCAAGATGACTGAAGAGAGAAAAGTCATGCTGAGACGTTACAATAACTTGACATTCATCCAGACTGATAAACCCATCTATATTCCAGGACAGACAGtacatttcaGAGTTGTCACCATGGATAGAAATTTTGTTCCCTTTGATCAAAAGtacaGTAAAGTCTTGCTAGAGGACAGTAAGAATAACAGGATTGGTCAGTGGACAAATATTTCCTCAACAAGGTGGATATTGCAGCTTTCTCATGAGTTGAACCCAGAGGCCCGTCAAGGCATTTATAAGCTAGTCGCTTATATTGGTGAACTGTCTATGCAACATTACTTTGAGGTGAAGAAGTATGTTTTACCCaagtttgaaatgacaataaatccTCCAAAAGAAATAAGTTTTGGTGCTAGTGACATGACTATGGAGGTTTGTGGAAAATACACATTTGGTAAACCAGTGGCTGGTAAAGCAAGAGTGGAAGTATGCCgggaacatttaaaatatattactgacATAGACTTGATTTCACCATGTTTGGCTGAAACTGCTGAGATGAGTGCAACGGGCTGCGCCTTCTTTACTTTGGACACATTGGTCTTTTTTAACTCGACACATGagagatttttaaaagaacaactTACTGTAACAGTGAAAGTGAAAGAAGAAGGAACAGAAAACACAATGGAGAAATCTGAAACTATAAGTCTGACGTATGAAATCGGTAAAGCTATGTTTACTGATCTACCCAAATTTTATGAACATGGGGCAGTTATACAGGGAAAGattaaattagaaaatttaAATGGAGTACCTCATGAAAACAAAGATGTTTATCTTTTGGAGGGTAAAAGGTGGTCTTCAAAACTGCTCCTAAATCTCACTACAGACCGTGATGGACTGGCCAGCTTCTCTCTGAATACATCTAGTCTTTCTAAAAAAGACATTAATCTGATGGCAAGTGCATATCCAAAGTTTCAATATCAAAGCTTTAAAAGTCCTTACTTctctacagaagaaaaaactgtTCAGATTCTCCGACCTGCCACTCCGTACACCCCAACATTAAGTGAATTGATTATAGAGAAAAATGAGCAACCATTAAAGTGTGATGCTGAGTTTACAGTGAacataaagtattattttgttGGAGAGACTGTTGAAGACTTCAAAACTGACATTGTCTATATGGTCTTATCCAGAGGAGTGATTGTTCATCACGGATATGAGAAAGTTGAAGTGAAGTCTTCTAATGGAGCAGCAAGTGGCACAGTGTCATTCAGACTGTCTGTTGGTGCAGATCTGGCTCCTGCTGTGAATGTTCTGGCCTACTGTGTTCTGcccagtgaaaatgttgttgCTCATAGCAGACTATTCAGAACTGAgaagtgtttaaaaaatgagGTGTCTCTGCAGTTTTCTCCTCTTAAAGCAGTTCCTGGTGAGAAAAACACTCTCCAGCTCTCAGCTGAACCTGGTTCTCTGTGCGCCCTCACTGCTGTAGATCAGAGCATCTTGATCCTGGAGTCAGGAAAACGTCTAGATACTGACAAGATTTTAACAGGTTATCCTTATAATACTGTGGATACACCAGAGTGCCTGGAAATTAGACCTCGTCGGGCTGTGTCACTAGACCATGTTTATGAAAGCTTGAAGAATGCGGGAGTGAAGATGGCAACAAATTTGCATGTGAGACAACCCCTTTGTCTGACATACTATGGTGTAACTTATAACAGAGCTTTTCACTTAGGTACGTctaatttgttatataataatgttttgttgttatatatagGCCTAAATTgcagaaaagtttaaaatgtatgcaatatc

Function

NR:

description
PREDICTED: alpha-2-macroglobulin-like

GO:

id name namespace
GO:0001889 liver development biological_process
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259453.1 True 2240 mRNA 0.40 16 13752142 13756092
XM_043259454.1 False 2216 mRNA 0.40 16 13752142 13756092

Neighbor

gene id symbol gene type direction distance location
LOC122358500 LOC107718289 coding upstream 84731 13604091 ~ 13667411 (+)
LOC122358501 LOC107690467,LOC107743726,LOC107585604,LOC107664918,LOC107718289 coding upstream 158463 13577002 ~ 13593679 (+)
si:ch1073-145m9.1 si:ch1073-145m9.1,LOC107592629,LOC107690475,LOC107718303,LOC107743751 coding upstream 187420 13560833 ~ 13564722 (+)
ift20 ift20,LOC107743753,LOC107585565,LOC107683839,LOC107601740,LOC107718287 coding upstream 238647 13511197 ~ 13513495 (+)
sae1 sae1,LOC107683835,LOC107585558,LOC107743692,LOC107690439,LOC107718284,LOC107601738 coding upstream 263031 13480966 ~ 13489111 (+)
LOC122358866 cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 coding downstream 18972 13775064 ~ 13796845 (+)
pak4 pak4,LOC107743662,LOC107664940,LOC107585589,LOC107685053,LOC107592622,LOC107744790 coding downstream 206361 13962453 ~ 13975188 (+)
zgc:152863 LOC107743663,LOC107664952,LOC107585590,LOC107592625,LOC107744814,LOC107685175 coding downstream 220752 13976844 ~ 13981992 (+)
npat LOC107743659,LOC107664943,LOC107585592,LOC107744791,LOC107685055,LOC107592638 coding downstream 239634 13995726 ~ 14003601 (+)
tsr1 tsr1,LOC107743656,LOC107585596,LOC107685058,LOC107592627,LOC107744794,LOC107664951 coding downstream 287646 14043738 ~ 14053249 (+)
G106354 NA non-coding upstream 59249 13692379 ~ 13692893 (+)
G106350 NA non-coding upstream 66693 13680180 ~ 13685449 (+)
G106276 ube4a,LOC107743704,LOC107718272 non-coding upstream 415465 13335308 ~ 13336677 (+)
LOC122358384 NA non-coding upstream 796335 12945077 ~ 12955807 (+)
G106157 LOC107670963,LOC107731150,LOC107586232 non-coding upstream 971767 12773457 ~ 12780375 (+)
G106370 NA non-coding downstream 43209 13799301 ~ 13811099 (+)
G106381 pafah1b1,lis1a,LOC107664934,LOC107743664,LOC107690414,LOC107744786 non-coding downstream 126029 13882121 ~ 13884081 (+)
G106385 NA non-coding downstream 157487 13913579 ~ 13913790 (+)
G106249 LOC107585585,LOC107743723,LOC107685050,LOC107664929 non-coding downstream 159149 13915241 ~ 13915685 (+)
G106603 NA non-coding downstream 325959 14082051 ~ 14083858 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 903475 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 1654496 12093957 ~ 12097646 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other upstream 1721593 12027555 ~ 12030549 (+)
LOC122358628 NA other upstream 2379451 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 3023747 10721972 ~ 10728395 (+)
G106376 cluh,LOC107685050 other downstream 160481 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 201105 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 1156819 14912911 ~ 14928225 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 1950421 15706513 ~ 15712439 (+)
G107107 NA other downstream 2125022 15881114 ~ 15883510 (+)

Expression


Co-expression Network