cwf19l2 (cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834)


Basic Information

Item Value
gene id cwf19l2
gene name cwf19l2,LOC107670086,LOC107706063,LOC107728743,LOC107669872,LOC107566889,LOC107560834
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22877852 ~ 22897674 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259494.1
GCTGCGACGGACGCGTTACGGCAGATGTTCGCGACAGTGGGAGCGCGTTCGCGGCAGCATCATGGCGGCGTGCGGTGTGAGTTTCGAGAGCGCAAACAGCATCAAATCTCGAAAAGAGGCCAaaagggaagagagagaggtcGTTTTACAACAGgcTAAGGAGAAGTACGagaaagaggagaggaggaaggCCGAGAGAAAGGCCAGGGGCGAGGACACGTGGATGCTTCCGGATGTTGACCTGCGTCTGCAGCAGATAGgccagGAGCATGCggtgaaaaacaagaaaaagaaaaaagagaagaaagcaaaaaagagcaagaaagagaagaagaagaaagctaagaaagagacaaaagacGATGACGACGCGTCTTGTGACAGCTCTGAAGACTCGGGGGACGAGTGGGTGGAggctccggctctgtcaggggGCGGCGGCCAGGCGTGGAAGGCGGAGCATGAGGCCACGCCCACCAGCAGCTTAGCCAGTGCTAACCAAAGAGACGAGTGGATGACTTTTGACTTCCTGGCGATGAAAACGACCTCGCTGGCCGAGAGACGAGCGCGAAAAGAAGCGGAGAAGGAGGCGGAAAGGCAGAAAGCAGAGGCTGTCGAACAGgctGGTCTTCACAGGTTAGAGTTGAATCCTTACTGGAAGGATGGAGGAAGTGGTCTGCCCTCGGAGGACAACTCCGGCACCGCAGTTAAAAAAGCTGGAGTGGTGAATGATGGAGGGGTGAGCTGGCTCAGGAAGTCATATCAGAGGATGAAAGAGCAGGCCGACAGAGAGCAGCGCAGTCTGGAGAGCGTGGTGGCGGAGAGATACGGGTCGATGGAGGATTTCCAGAAGAGACTGCGAGAGGCAGAAGAGGCAGCGTATGGAGAGAGGGGCGAGAGGAGAGAAGACCGAGAGAGATGGAGGAGAGACGACagagaggaagggagggagCGATGGAGGAGGAGAGACCGGGAGGAGACACGGAGAGACAGATCTCCCCGCtccgagagagaaagagactttGAGAGAGGACCCCGAGGCCGAGACGAACGCCATCCCAGATCCCGAGCGGATCCAGACGAGGAACAACATTCTCAGAGACGCAACGCTTCCTCTCTGTCCAGCCTCAAATTCCTCAAACCTGACGCCGATGAGGACGTGAGCGGAGGGGCGGGGTTCAGGAAGGCGGGGCCGAAAGGCACTATGTCCAATCAGGGTGCAGGATTCAGGAAACCTGTGGATGACGACGGTGATGGTGCTGCGCCCGCATGGAGGAAGAGGAGTGCCACACGGGATCCAGAGGAGACGGCGATCCCACCgaaacacacagagaagagCGCCGCCCCGCTGGAGGAGAGCAAAACTACAACCACATCAACAACAGTGAGCAGTTCAGAgagtgaagaggaggaggaggaagaggtgATCCTGACAGATGAAGAGATGAATAAACTGGGAGCCAAACTCGTTAAGGCAGAACTCATGGGAAACACGGCGCTGGCGGAAAAACTGAAGGCTCAGATGGAAGCGGCCCGTCGAGCCAAAGAGAGCCGAGCGCAAAGAAACGCCCAGAACAAACCCGTTTCAACACCGCCGGACTCCGAGAAGGACGTGGTGCTGTTCAGGACCGACCCGTCGGGACGAGCCTGGCCGGTCAAAGCCCCGTCTCAACCGCAGGAGCCTCGAGGAGGACGGAGGAAGCAGAAAGCGATCGAGACGCACCAGGATGGCGAACGCGTGCGCTATtttgaggatgatgatggtATGGATCTGAAAGAGATGGTCAGACGGGAGAAGATGAGCTCTGCTGAAGATCAGAATGCTCTTTACTCACGCATGGCAGCTAAGATGATGGGGAGGACAGACGGAGATAACTACACTCTGGATGACATGTTTGTGTCTAGCGCGGCTCAAAGAGAAAGATCGGGTCGAGACGAAGAGCGGCAGAGGAACAAAGCAGTGCAGGAGACGCGGCGGTTAGCCGGACGGATGGACAAATGTAGACACTGCTTCGACAGCCCTGAGCTGCCTAAACATCTGATCGCCGCTGTCGGAAACAAGGTGTACTTGTGTCTGCCGAACAGCGTGTCTCTGACCGAAGGTCACTGTTTGATCGTCCCTATCCAGCATCACACAGCTGCCACGGGTCTGGATGAGGACATTTGGAGTGAAATACAGATGTTCAGACAGGCTCTGGTGCGTATGTTTGAGTCTCAGGAGTTGGACTGTGTGTTTTTGGAGACTCACATGAACCCGAAGAGGCACCTGCACATGGTCTACGAGTGTGTGCCGCTGCCCAGAGAGCTCGGCGACATGGCACCCATTTACTTTAAGaaagCCATAATGGAATCAGATGAGGAATGGGCCATGAACAAGAAGGTTGTGGATCTCTCATCCAGAAGCATCAGACAAGCTGTTCCTCGCGGGTTGCCGTACTTCTCTGTGGATTTCGGATTGCAGGGCGGATTTGCGCACGTCATCGAGAACGAGCAGAAGTTCCCACACTATTTCGGCAAAGAAATCCTGGGCGGGATGCTGGACCTAGAACCGAGGCGCTGGCGGAAACCGATCCGTGAGAATTTCGACGACCAGCGCAAGAAGGTTCTGAAGTTCGCTCAGTGGTGGAAAGCGTTCGACTGCACTAAAAACGACGGCTAGACGCTGAGACGGTGTGCTTTCTCAACTCCACACTTGTCTTTTAAGAGGGCTTAGCAAGTGTACGTGGCTCCagtatctaaaataaaaagtaagcaTTTAAACCAGGCATGTTTTATCCGGTCTGAAGATTTTTATGGGACCCTCTCGTGTTTCAAATCTaggtaaatgttttgttttttaattaaatatcaaatattagtttttatctgaaatatgtTACCTGATCTTGTCTGGTGTTGATGTAAATCGTGTTTTCCTGAGCAATTAAactcataataaaatattagaagccCGCTCAGCTGATTATGTG

Function

symbol description
cwf19l2 Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of post-mRNA release spliceosomal complex. Orthologous to human CWF19L2 (CWF19 like cell cycle control factor 2).

NR:

description
CWF19-like protein 2

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K24940 CWF19L2; CWF19-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259494.1 True 2969 mRNA 0.53 18 22877852 22897674

Neighbor

gene id symbol gene type direction distance location
LOC122358713 NA coding upstream 20413 22856477 ~ 22857439 (+)
LOC122359065 NA coding upstream 21036 22853258 ~ 22856816 (+)
LOC122358712 NA coding upstream 25203 22839191 ~ 22852649 (+)
LOC122359069 NA coding upstream 29974 22844910 ~ 22847878 (+)
LOC122359067 NA coding upstream 40333 22835659 ~ 22837519 (+)
gucy1a2 gucy1a2,LOC107566890,LOC107706059,LOC107669873,LOC107725744 coding downstream 10877 22908551 ~ 22937932 (+)
pdgfd LOC107689581,LOC107670136,LOC107756229,LOC107725770 coding downstream 193251 23090925 ~ 23114178 (+)
fzd4 fzd4,LOC107600811,LOC107551868,LOC107725773 coding downstream 360076 23257750 ~ 23262190 (+)
LOC122358508 parl,LOC107670111,LOC107689587,LOC107725764 coding downstream 474986 23372660 ~ 23378269 (+)
atg16l1 LOC107689588,LOC107551872,LOC107670107,LOC107600818 coding downstream 478904 23376578 ~ 23400826 (+)
G108981 NA non-coding upstream 39730 22837685 ~ 22838122 (+)
G108949 NA non-coding upstream 102279 22774778 ~ 22775573 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding upstream 211559 22660985 ~ 22666293 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding upstream 229507 22587935 ~ 22648345 (+)
G109006 LOC104959606 non-coding downstream 100856 22998530 ~ 23006786 (+)
LOC122358995 NA non-coding downstream 143396 23041070 ~ 23066216 (+)
G109017 NA non-coding downstream 213882 23111556 ~ 23113058 (+)
G109018 NA non-coding downstream 219155 23116829 ~ 23117749 (+)
G109030 NA non-coding downstream 242556 23140230 ~ 23141517 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other upstream 100127 22775649 ~ 22777725 (+)
G108573 NA other upstream 1140165 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 1142134 21735014 ~ 21735718 (+)
G108571 NA other upstream 1144745 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 1151586 21724404 ~ 21726266 (+)
G108990 NA other downstream 51466 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 58037 22955711 ~ 22959679 (+)
G109132 NA other downstream 349101 23246775 ~ 23271291 (+)
G109193 NA other downstream 611758 23509432 ~ 23510315 (+)

Expression


Co-expression Network