flot2b (flot2b,LOC107661103,LOC107727921,LOC106581211,LOC105011286)


Basic Information

Item Value
gene id flot2b
gene name flot2b,LOC107661103,LOC107727921,LOC106581211,LOC105011286
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9927268 ~ 9935456 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259528.1
GTACCACCCTTCCTTCCTGTGGTGGTGGGCAGGGTCGCCTCTGTTGACAAACATTTATTCTCGCTCTGGggctgaggtttttttttcatttcgcGAGCCGCCAAATAAACGCTCGGTTAAGTTTAAATACACAGGACAGCGCACGAGAGGATTAGTGTTCGGTGTTGATGTAAACGCAAGTATGGGTTGCTGCCTGACTGTCGGACCAAATGAAGCGCTCGTTGTGTCAGGTGCCTGCTGTGGGTCAGACGAAAAGACGTATGTGGTGGGAGGCTGGGCTTGGGCATGGTGGCTTATATCAGACACACAGAGAATTACGCTAGAGATTATGACACTACAGCCTAAATGTGAAGACGTGGAGACAGCGGAGGGAGTCGCTATTACAGTTACAGGAGTTGCTCAAGTCAAGGTTATGACTGACAAAGACTTGCTGGCGATTGCCTGTGAGCAGTTTCTGGGAAAGTCTGTCATGGAAATCAAGGCTGTGGTCCTGCAAACCCTGGAGGGACATCTGCGTTCTATCTTAGGCACTTTGACAGTGGAGCAGATCTACCAGGATAGAGATGAGTTTGCTCGGCTGGTGAGGGAGGTGGCAGCTCCTGATGTGGGCCGGATGGGTATTGAGATCCTCAGCTTCACTATAAAAgATGTCTATGATAAGCTGGACTACCTGAGCTCTCTTGGAAAAACTCAGACAGCGGCTGTACAAAGGGACGCTGACATCGGAGTGGCCGAGGCAGAGAGGGATGCTGGGATTAGAGAAGCTGAGTGCAAGAAAGAAATGATGGACGTGAAGTTCTTGGCCGACACTAAAATGGCCGACTCCAAGCGAGAGCTGGAGCTGCAGAAAGCTGCTTTCAATCAAGAAGTGAACACTAAGAAAGCCGAGTCTCAGCTGGCCTATGAACTACAGGCAGCTAAAGAGCAGCAGAAGATCAGATTGGAGGAGATCGAAATCGAGGTTGTGCAGAGGAAAAAGCAGATCTCCATTGAGGAGAAAGAGATTGAGAGGACAGAGAAGGAGCTGATTGCGACGGTCAAGCGTCCTGCTGAAGCAGAGGCTTACAAGATGCAGCAGCTGGCTGAAGGACAGAAGTTGAAGAAAGTGCTGACTGCTCAGGCCGAGGCAGAGAAGATCAGGAAGGTCGGAGAAGCGGAGGCCATCTCTATCTCATCTGTGGGGAAGGCCGAGGCCGAGAGAATGAGGCTGAAGGCGGAGGCCTACCAGCAGTACGGAGAGGCCGCCAAGACTGCCCTCGTCCTGGAAGCACTTCCCAAGATCGCTGGAAAGGTGGCAGCTCCTCTGGCCAGGACCAATGAGATTGTCATTCTGAGTGGAGACGGCAGCCGCGTGACCGGGGAGGTGAACCGTCTCCTCGCTGAGCTGCCCGTGTCCGTGAACGCACTCACGGGTGTGGACCTGTCCAAGATCCCTCTGTTGCAGAAGATGACAGGTGCTCAAGCATAAAGTCAATCAGTTGCGTCTCCTCCATAATATGTTGTATGCACTCACAGAAACTGCCTTTAGAAGACttggaaatctttttttttttttttttt

Function

symbol description
flot2b Predicted to be involved in protein localization to plasma membrane and regulation of myoblast differentiation. Predicted to be located in endosome and membrane. Predicted to be part of flotillin complex. Predicted to be active in cytoplasmic vesicle and plasma membrane. Orthologous to human FLOT2 (flotillin 2).

NR:

description
flotillin-2

GO:

id name namespace
GO:0007155 cell adhesion biological_process
GO:0005768 endosome cellular_component
GO:0030139 endocytic vesicle cellular_component
GO:0016020 membrane cellular_component

KEGG:

id description
K07192 FLOT; flotillin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259528.1 True 1560 mRNA 0.51 11 9927268 9935456

Neighbor

gene id symbol gene type direction distance location
p2rx8 LOC107672369 coding upstream 10156 9911656 ~ 9917112 (+)
mrm3a LOC107716545,LOC107582598,LOC107672374 coding upstream 79883 9844405 ~ 9847385 (+)
tada2a tada2a,LOC107661114,LOC107755391 coding upstream 230724 9679771 ~ 9696544 (+)
nek8 nek8,LOC107672375,LOC107758702,LOC107661116,LOC107592757,LOC107582647 coding upstream 340166 9577565 ~ 9587102 (+)
trnar-ucu_52 NA coding upstream 352325 9574855 ~ 9574943 (+)
galnt17 wbscr17,LOC107714690,LOC107582595,LOC107727938,LOC107554251,LOC108411682 coding downstream 13937 9949393 ~ 9965676 (+)
gdpd1 gdpd1,LOC107672421,LOC107554273,LOC107659934 coding downstream 151221 10086677 ~ 10092950 (+)
clptm1 clptm1,LOC107727917,LOC107715057 coding downstream 243810 10179266 ~ 10187171 (+)
relb LOC107715143,LOC107582588,LOC107701429,LOC107659928,LOC107727919,LOC107554269 coding downstream 255131 10190587 ~ 10199278 (+)
LOC122358538 NA coding downstream 302721 10238177 ~ 10241248 (+)
G105171 NA non-coding upstream 19350 9846835 ~ 9907918 (+)
G105168 NA non-coding upstream 83216 9843836 ~ 9844052 (+)
G105145 LOC107714397,LOC107672358 non-coding upstream 111878 9813991 ~ 9815390 (+)
G105109 LOC107727913,LOC108415199,LOC107672419,LOC107582599,LOC107714247,LOC107661107,LOC108277446 non-coding upstream 124151 9763871 ~ 9803117 (+)
G105225 NA non-coding downstream 194095 10129551 ~ 10131865 (+)
G105199 LOC107582590,LOC107715485,LOC107701431 non-coding downstream 214506 10149962 ~ 10169712 (+)
LOC122358545 NA non-coding downstream 236406 10171862 ~ 10177828 (+)
G105240 NA non-coding downstream 237851 10173307 ~ 10175622 (+)
G105242 NA non-coding downstream 242416 10177872 ~ 10178226 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 211579 9703426 ~ 9715689 (+)
G105011 NA other upstream 253923 9669634 ~ 9673345 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other upstream 303296 9588789 ~ 9623972 (+)
dhrs11b.1 dhrs11b,LOC107694033,LOC107592755,LOC107752375,LOC107582609,LOC107672392,LOC107758673 other upstream 375140 9549752 ~ 9552128 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 403294 9515955 ~ 9523974 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other downstream 157999 10093455 ~ 10110443 (+)
G105248 NA other downstream 269383 10204839 ~ 10207452 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other downstream 417705 10353161 ~ 10390600 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 786516 10721972 ~ 10728395 (+)
LOC122358628 NA other downstream 1434792 11370248 ~ 11372691 (+)

Expression


Co-expression Network