LOC122359294 (si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807)


Basic Information

Item Value
gene id LOC122359294
gene name si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9429444 ~ 9432324 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259602.1
tccttacccgatgtctgtacctgtgtttatcctgcctgcctgttcgacctgcctATGTGCGCACAATGGCCAGCGTGAACGCCAGCGGCTACGAGCAGATGCAGCTGATCCAAGCTGACCCCGTCCGCAGAAACATTTCACTGGCGCTGACCCAGATCTTCGTGTGGCCCTTCATCTACCTCACCTTCCTCATGCTCTTGATATTCTCCAAGAAAGAGACTTTCAGAACAGAGACGCGTTACATATTGTTCGGCCATTCTCTGCTGGTAGAcctaatgtttctttttctgacagattttgtggtgctgCTATCCTACAACTTCGTTTTAATACCTTTGCACTTCTGTATCCCCGTCTGTATGTTAATGGAAGCGATCACAGCATGTGCGCCGCTGACCATCATAGCCATGTGTGTGGAGCGCTATGTGGCCATTTGCATGCCTCTGCGTCATCAGGCCATCTCCACCTCTAGAAGAGCCCTCATAGTGATTTTAATGATTTGGATCCTGAGCTCCATAAACCCCTTTGTTGACATGTTTATCCTCATTAGCACCGCCTCCCGTGAATACTTGTCTCAGCTGACGCACTGCCACTATGAGATTATGATTCCGGAAAAGATTCGTCACTTTGCTAGGGGTCTGTTGTACATTGTGGGGCTTGTGTTCATTTTGATAATTGAGGTCTTTTGTTATGTAATGATATATCTTGCTGCGCGTGCAGCTTCCGGTGACAATAAGAATTCAGCATCAAAAGGGCAGCGCACTATTTCTCTTCATATCCTTCAGCTGTTTCTGTGTACGGCTGAGGTCATGTGTCCTTATATTGAAGCTGTAGTTATGCAGTATGATATTCAAACATACCTGACTGTCCGGTTTATAAATTTCCTCGCGTTTAGTATCACTTCTAGAGCAGTAAGTCCCCTCGTCTACGGCTTTAGAGATGAGAAATTCTACGCAGCTATGGTTTATTACGTCAGATGCAAAAACAACACCATCTCAACTGACTCAGTTAAACAATCGTGATTatcatttagtacatttttaataattcgaTTAAACTACATGTATTTAATGATTGCATGTGTGATTCTAACGGGcctacatttatatacaaatgtatgtcAAGTTATTCGTATGATGAAACACATTCTTTAGAATAGTTTTGATAGAGTAAATGCATT

Function

NR:

description
PREDICTED: adenosine receptor A1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259602.1 True 1180 mRNA 0.43 2 9429444 9432324

Neighbor

gene id symbol gene type direction distance location
LOC122359130 si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807 coding upstream 3034 9414951 ~ 9426410 (+)
b3gnt7 LOC107574760,LOC107732665,LOC107668660,LOC107668489,LOC107570457,LOC107720736 coding upstream 138040 9288004 ~ 9291404 (+)
sars2 sars2,LOC107672413,LOC107758861,LOC107395008 coding upstream 426182 8995892 ~ 9003262 (+)
fbxo46 si:dkey-114g7.4,LOC107672409,LOC107758538,LOC107561382,LOC107749655,LOC107678246,LOC107560627 coding upstream 448552 8975037 ~ 8980892 (+)
si:ch211-11n16.2 si:ch211-11n16.2,LOC107561380,LOC107678255,LOC107749652,LOC107672363,LOC108278225,LOC108442869,LOC105909327 coding upstream 511757 8908510 ~ 8917687 (+)
diabloa LOC107752388,LOC107588772,LOC107694024,LOC107758583,LOC107672415 coding downstream 2085 9434409 ~ 9436796 (+)
nectin3a LOC107672414,LOC107758600,LOC107694025,LOC107752386,LOC107588797 coding downstream 5692 9438016 ~ 9468883 (+)
si:ch211-149e23.4 LOC107758610,LOC107672406,LOC107582615 coding downstream 52279 9484603 ~ 9494052 (+)
med29 med29,LOC107752392,LOC107694027,LOC107592747,LOC107758885,LOC107672381 coding downstream 66766 9499090 ~ 9500650 (+)
c2cd3 c2cd3,LOC107752384,LOC107694017,LOC107758810,LOC107577194 coding downstream 69111 9501435 ~ 9515858 (+)
G104974 NA non-coding upstream 36875 9392141 ~ 9392569 (+)
G104973 NA non-coding upstream 37591 9391457 ~ 9391853 (+)
G104937 NA non-coding upstream 179036 9249947 ~ 9250408 (+)
G104925 NA non-coding upstream 199257 9229959 ~ 9230187 (+)
G104875 NA non-coding upstream 509280 8917987 ~ 8920164 (+)
G105002 NA non-coding downstream 110042 9542366 ~ 9543202 (+)
G105101 NA non-coding downstream 265750 9698074 ~ 9698409 (+)
G105106 NA non-coding downstream 273884 9706208 ~ 9706530 (+)
G105112 NA non-coding downstream 301879 9734203 ~ 9738624 (+)
G105109 LOC107727913,LOC108415199,LOC107672419,LOC107582599,LOC107714247,LOC107661107,LOC108277446 non-coding downstream 331547 9763871 ~ 9803117 (+)
LOC122358919 armc9,LOC107668662,LOC107668488,LOC107720734 other upstream 148975 9252508 ~ 9280469 (+)
LOC122358603 LOC107749646,LOC107678243,LOC107560621,LOC107758746,LOC107561373,LOC107577085 other upstream 668028 8756327 ~ 8761416 (+)
LOC122358602 LOC107749646,LOC107678243,LOC107560621,LOC107577085 other upstream 676626 8747803 ~ 8752818 (+)
LOC122358505 clca4,LOC107749648,LOC107758746,LOC107678237,LOC107577085,LOC107678235 other upstream 795473 8628860 ~ 8633971 (+)
G104466 cyp2y3 other upstream 1011980 8401311 ~ 8417464 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 83631 9515955 ~ 9523974 (+)
dhrs11b.1 dhrs11b,LOC107694033,LOC107592755,LOC107752375,LOC107582609,LOC107672392,LOC107758673 other downstream 117428 9549752 ~ 9552128 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other downstream 156465 9588789 ~ 9623972 (+)
G105011 NA other downstream 237310 9669634 ~ 9673345 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other downstream 271102 9703426 ~ 9715689 (+)

Expression


Co-expression Network