rps6kb1b (rps6kb1b,rps6kb1,LOC107701421,LOC107597508,LOC107659922,LOC108443350)


Basic Information

Item Value
gene id rps6kb1b
gene name rps6kb1b,rps6kb1,LOC107701421,LOC107597508,LOC107659922,LOC108443350
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10343436 ~ 10350306 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259641.1
TCTCCTCCGCGCGGGGGTGTCAGTTCGCGTCATGCCGGTCATGGCGTCGGTGCGTTCATGTCCATGAGGCGGGAAGCGCGAGCTCCTCACGCGGCTTGAAGTGACCCCCGACGGCGAAATCAACGATGGCTGGCGTTTTCGACATCGATCTGGACCAGCCGGAGGAAAATGTCTCCGATGATGAGCTGGAGGAGGCTCAGATCAATGACCTCATGGATCAGTGCAGTGGCTTTGAGTTtaacaTGGACGACTGTGAGAAGATTGAGATATCGGAGGACAACGTGAACCAAGGCACTGAGAACATCCGTCCGGAGTGTTTTGAGCTTCTCCGTGTGTTGGGAAAAGGAGGTTATGGAAAGgttttcCAGGTTCGGAAAGTATCTGGCGCAGGATCAGGAAAAATATTTGCTATGAAAGTCTTAAAAAAGGCTATGATTGTACGCAACGCCAAGGACACAGCGCATACTAAAGCAGAGAGGAACATCTTAGAGGAAGTCAAGCATCCTTTCATCGTTGATCTAATCTATGCCTTTCAGACGGGCGGCAAGCTTTACCTCATCCTTGAATACCTAAGTGgtGGGGAGCTTTTCATGCAGCTTGAGCGGGAAGGGATTTTCATGGAGGACACAGCCTGCTTTTACTTGGCCGAAATTTCTATGGCTCTCGGACACCTGCATCAGAAAGGCATCATCTACAGAGATCTCAAACCTGAGAACATCATGCTCAATAACCAAGGACATGTGAAGCTGACTGATTTCGGGCTGTGTAAGGAGTCGATTCATGACGGCACGGTGACGCATACTTTCTGTGGCACTATTGAATACATGGCTCCAGAGATCCTCATGAGAAGCGGACACAATCGGGCCGTTGACTGGTGGAGTCTGGGGGCTTTGATGTATGACATGTTAACTGGAGCCCCCCCCTTTACAGGAGAGAACCGTAAAAAAACCATTGACAAAATTCTTAAATGCAAACTGAACCTCCCACCCTACCTCACACAAGAAGCCAGGGACCTTCTCAAAAGGCTACTGAAAAGAAGTGCCTCATCTCGGCTTGGGGCTGGACCTGGAGATGCAACAGAAGTACAGACTCATCCCTTCTTCCGACATGTTAATTGGGATGACCTTCTCGCGCGTAAAGTAGAACCACCGTTCAAGCCTTTCTTGCAATCTGCTGACGATGTGAGCCAGTTCGATTCAAAGTTCACCAGCCAGACTCCCGTTGACAGTCCTGATGACTCCACACTAAGCGAAAGTGCAAATCAGGTCTTTTTGGGTTTTACCTATGTAGCTCCATCTGTGTTGGAAAATATAAAGGAAAAGTTCTCATTTGAGCCAAAAATTCGTTCACCTCGCCGGTTTTTGGGAAGCCCTCGCACGCCTGTCAGCCCCATTAAGTTCTCAGGAGATTGTTGGCCACGAGGTCCCACTTTACCCGGATCCTCTACCCTCCAGTCCCCCACAGAGCTCGCTATGGATGTGTCCACCATGGATCAGATGGAGGTCCAGGCTAGTTCGGAGGCCACCGCCCCTCTTCCCATCAGGCAACCCGCTGGCTCCAACGTGGGCCAGTTTAAGCAGCAGGCCTACCCCGTGATCTCCAAAAGGCCAGAGCATCTACGTATGAACCTATGACCATTAGTCCAACTTAGAGTTTTCCTTTGCTTTCTCTATTTCTTTTATATGGACACCTGGGGCGAAGAAAGGTCCCCACAGTCACTACCATCTGCTATATACTGTCCTTCACATCTGATGAGCATGTGTCTTTCACCGAGTTCGAGAAACTGCTACGGTTCCTCACATCCCAAAACCTCAGAGTGCATTCTTAGATGATTCCTGTCATTTACATATCAAATGGATTATCAGGATCGGGCCTTTTTTTGGATTATCAActtttttacatgattttaccATAAAAGgaacatcaaacaaacaaaaagagaaaaaaaaaaagacactattTGCAAATGTGCAGATGAGTTGATGATCCCTGCAAGAAGATCAAGTGATGTTGAGGAATTGCTTCCAGTGGGATGCTTTtgagtttttacagtatttccaAGGAAAGCTGAATCGCTTTCCAGCTGTTAAACAATTGTACAAATCATCGTGGATGGCAGAATGAGATGCGTTTGTGGGAGGTTCGCTCAGCGGAGGTTCGCAACCTGACTTAAgtcttatacatttttaaatgagtgtATCCCACAGTGCTGTATAGATGATGGATAAATACACGAGcctcaataaaaacaaatatgttgacTTTTGAAACTTTA

Function

symbol description
rps6kb1b Predicted to enable ribosomal protein S6 kinase activity. Predicted to be involved in TOR signaling and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation and signal transduction. Predicted to be located in ribosome. Predicted to be active in cytoplasm and nucleus. Orthologous to human RPS6KB1 (ribosomal protein S6 kinase B1).
rps6kb1 Enables protein serine/threonine/tyrosine kinase activity. Involved in several processes, including G1/S transition of mitotic cell cycle; TOR signaling; and negative regulation of insulin receptor signaling pathway. Located in mitochondrion and nucleoplasm.

NR:

description
PREDICTED: ribosomal protein S6 kinase beta-1-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04688 RPS6KB; ribosomal protein S6 kinase beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259641.1 True 2275 mRNA 0.47 15 10343436 10350306

Neighbor

gene id symbol gene type direction distance location
vmp1 vmp1,LOC107582631 coding upstream 7024 10325905 ~ 10336412 (+)
cltcb cltcb,cltc,LOC107554261,LOC107659923,LOC108443353 coding upstream 18016 10300340 ~ 10325420 (+)
dhx40 dhx40,LOC107659925 coding upstream 44161 10286955 ~ 10299275 (+)
LOC122358538 NA coding upstream 102188 10238177 ~ 10241248 (+)
relb LOC107715143,LOC107582588,LOC107701429,LOC107659928,LOC107727919,LOC107554269 coding upstream 144158 10190587 ~ 10199278 (+)
LOC122358985 LOC107701419,LOC107713466,LOC107728785,LOC107597592,LOC100001991,LOC107582628 coding downstream 81259 10431565 ~ 10441298 (+)
LOC122359095 LOC107713423,LOC107701398,LOC107659919,LOC107717187,LOC107597513,LOC107582627 coding downstream 171387 10521693 ~ 10539063 (+)
LOC122358614 LOC107713423,LOC107701398,LOC107659919,LOC107597513,LOC107717187,LOC107676612 coding downstream 194421 10544727 ~ 10558178 (+)
LOC122359094 LOC107713423,LOC107701398,LOC107597513,LOC107659919,LOC107717187 coding downstream 214183 10564489 ~ 10580681 (+)
dixdc1a dixdc1a,dixdc1,LOC107713457,LOC107701411,LOC107699911,LOC107717189 coding downstream 313504 10663810 ~ 10672600 (+)
G105395 NA non-coding upstream 5990 10336766 ~ 10337446 (+)
G105242 NA non-coding upstream 165210 10177872 ~ 10178226 (+)
LOC122358545 NA non-coding upstream 165608 10171862 ~ 10177828 (+)
G105240 NA non-coding upstream 167814 10173307 ~ 10175622 (+)
G105199 LOC107582590,LOC107715485,LOC107701431 non-coding upstream 173724 10149962 ~ 10169712 (+)
G105411 NA non-coding downstream 37177 10387483 ~ 10387744 (+)
G105413 NA non-coding downstream 41153 10391459 ~ 10391718 (+)
G105416 NA non-coding downstream 54713 10405019 ~ 10405333 (+)
G105458 NA non-coding downstream 113896 10464202 ~ 10464899 (+)
G105469 NA non-coding downstream 156685 10506991 ~ 10507793 (+)
G105248 NA other upstream 135984 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 232993 10093455 ~ 10110443 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 627747 9703426 ~ 9715689 (+)
G105011 NA other upstream 670091 9669634 ~ 9673345 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other upstream 719464 9588789 ~ 9623972 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other downstream 2855 10353161 ~ 10390600 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 371666 10721972 ~ 10728395 (+)
LOC122358628 NA other downstream 1019942 11370248 ~ 11372691 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 1677249 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 1743651 12093957 ~ 12097646 (+)

Expression


Co-expression Network