galnt17 (wbscr17,LOC107714690,LOC107582595,LOC107727938,LOC107554251,LOC108411682)


Basic Information

Item Value
gene id galnt17
gene name wbscr17,LOC107714690,LOC107582595,LOC107727938,LOC107554251,LOC108411682
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9949393 ~ 9965676 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259654.1
TTCATTCAGTGTAAATATAATCCATTGCTACATACACTAAGGGAAAGTAACGGCGCACTTAGTGCAAGTAGAAATTCGGTCTTCTTTCCGTGCATGTGACGTTTTGGCGTCGTCCACGTAGGTGAATAGAGTTAAGTGGCGCGCGCGTGAGCAGCTCTTTAATCCCACACATCTGCTCCACATGCTGCATCCACTCCGTGTTTTCCGTCAGCCTCAGCCGAGGCGCTATCCAGCATTATGTGGACAAAACGGTTTAACGGGGCACATTAACTGCAGAAAACAGCGTGGATGGCGCGAGATGCGGGATGCCCGTGGATCGGCGCGGATCACCGACGAGCGTCACACAGCAGCGGGATATGAAACAGCGTTTCTAATGAAGGCTGCGCTTGCTGTGGATGAATCCGGCTGGAGATGATGCTGCGTCCGCGGGGTCTCGTAGCTCAAGTGGAGGGATCTCACATACTTCTGCTCATCCTGGGCAAACGCGCACGTTAAGTCTGACTCCTTCTGACATTATTTCTAGCAAAGAACAGCCGTGTTTGTCGGCGAAGACCTCGTAGATTTGACTGACAGATGTCTTGTGATGAATGACTGCAGTTTCGGACCCTTTGCTGTGACTCTTTgaagtatgtaaataaattccCCATGTGGATTTTATTTATAAGAACATGTGAATACGGATGAAAGCGCGCAGGAGGACTCTATATTCAAGATGCATTTTACCCATTCAAAATGatgCGATTCGCTGGATTCCGAACACCAAAATCATTTATGGCCTTTGTGATGAGAAGATGGAAAATCTTACTGGTGCTGAATGTGTTTACGATGGCTGGCTTCATCACTTTTTGGGGCAAGTGCAATTTACGCACAACCAAAGCTGTTGGTCAACAGGCGGTGGCTGCTGATGTGAGAGGACAGACGCATCTGAATGGATCTGTTCAGGAGATCAGCATCACTCATGATGTGCTCTTAAAGAGACTGGGGTCACTGGAGGATGTAGTGTACAGACAACTGAATGGTTTGTCCAagtctcttgggctcattgaaggTTTTGGAGGCCGAGGTAGAGGAGGTCTACCAGCAACACTTACACCAGAGGAAGAAAAGGAGGCCAAATACCTGAGGGAGAAATATGGCTACAATGCATTTCTGAGCGACAAAATCTCTCTCGATAGATCTATTCCAGATTATCGACCCAGCAAaTGCAAAAAGGCCTTATATCCCCGTGACCTGCCACAGATCTCCATCATTTTCATCTTCGTAAATGAGGCGTTGTCTGTCATACTGCGTTCAGTCCATTCAGCTGTCAACCACACACCAGCTCATCTCCTAAAGGAAATCATCTTAGTGGATGACAACAGCGATGACGTACAACTGAAAGGGCCACTGGAGGAGTATGTCAACAAGCGCTACCCGGGTCTTATCAAAATAGTGCGCAATCAGAAGAGAGAGGGTCTCATCCGGGCTCGCATCGAAGGCTGGAAAGTGGCCACTGGGGAGGTGACTGGCTTCTTTGATGCCCATGTTGAGTTCACGCCTGCATGGGCTGAACCAGTTCTGTCTAGAATCAAGGAGAACCACAAGAGGATCATACTGCCCTCCATAGATAACATTAAAGACGAGACGTTTGAGCTGGAACGCTATGAGAACTCAGGCCATGGTTATAACTGGGAGCTCTGGTGTATGTATATCAGCCCACCGAAACAGTGGTGGGATGAAGGAGACACTTCTGCACCTATCAGGACGCCTGCAATGATAGGCTGCTCTTTTGTGGTAAACCGGGAATACTTTGGGGAGTTGGGCCTACTGGACGCAGGGATGGACGTGTATGGAGGCGAAAATATAGAGCTGGGAATCAGGGTTTGGCTGTGTGGGGGAAGCATGGAAGTTCTGCCTTGTTCCAGAGTAGCTCATATTGCAAGAACAAAAAAGCCCTACCACAGTAACATAGCCTTTCACACGAGGCGCAATGCACTTCGAGTGGCAGAAGTCTGGATGGACCAATACAAATCAAATGTCTATTTGGCATGGAACCTTCCGATGAAGAACCATGGTATTGACTATGGAGACATATCCCAGAGATTAGCACTCAGGAAAAGACTCCAGTGCAAAAACTTTGAGTGGTACCTCGACAATATTTATCCAGAGATGAGGAGATACAACAACACTGTCTTTTATGGAGAGATACGCAATACCAATGTGACCCATCTGTGTGTAGACCAGGGCATAAAGGAAAACCACACAGCAACTCTGCACCCCTGCCATGGTTGGGGCCCTCAGCTGGGTCGCTACACTAAGGAGGGTTATCTTTTCCTGGGTCCTCTGGGAAGCACTGGCGAAGATACGCGGTGTGTGGTGGACGATAAAATCAGCAGCTACCCACAGCTCCTGAATTGTGAGAAAGTCTCCAGCGTACGCCAGAAAACATGGCACTTTGCACAGAATGAAGCAATCATCAACCGAGCTACAGGACGCTGTCTTGAGGTAGTGCCGGCTAATGTCTACTTCGGCTACGCTCTGATCCTGCGTTCCTGCACTGGCCAGAAGTGGAACATCAAGAATTTGATGAAGCAGGACTGAGGGCAGTGAGTTAGCAAACTTAGAAAGTTGGGAATCTCTATGGCCTTCATTGAACTTTAGAAAATGGAGCCAGTTTTGTGGAAATCAAGGGGTGCCGATCATGTTTGCgtgttttgggtttttggtCTTATTACATTCCACAGTACAAAAAAACTGACATTGAAAGAACCACTGCATACAGTAGCTTCCTCAGATTTCCATCTTCTGGAAAACCTCTAGACATCCTTTCAAAAATGACGGCTCTCTGAGGAACACTGGATTTCGTAAGTTGCAAGAACTGTAAAGAACATCGATAGCTCCTCCAGTAACCTCgctgtaattaaatattctgAAGCACATAAACTATGTTGAAGTTAGGTGTGCAACATTTGAGTTTCAACCATGACAGCAACCAAGTCTTGAGTGCTGAAATCAAAATGGCAGTTAAACGTTGTAGATGATCAACTGCTGTATTGCAGATACTCTGTATAACAGTGTGTAATTTAAAGTATCAGTTcacattcagaataaaaatttcataataattCACTCACTGTCATATGATCCAAGATGTGCATGTCTTTTTaaggatttttctccatataggGGACTTCAGTGGTTGCCAATGGGTTGAATGTCCAAATAGCAGTTTGAATGCAGCTTTGCAGAATTCTGCATGATCCCAGGCAAGGAATAAGGGTCTTATCTAGGGAAATGAACTGTCATATccttaaaacaatatattatccGCACATTATGATAAAACAATGCACAAtggcacacacaaaaacacacacatgcttctaaacgaattttttttttttttttggaaaattacaaattatttcgTAAGATAATACCCTTATTCCTTGGTGTAATTTAACTGCATTCAACTCACCTGTTGTGCACCATCGAAGTCCACTACATGGAGAAAAGTCTGGAATGTTTTCTCctaaaaaccttaatttctttGCAACTGAAGACAGAAATGCATGATAATCTTGAATTACTGgcgggtgagtaaattatgagaaaaatgttattctagAAGTGAACCTATCCTGTAAGTCTATTCTTAAATTATATACGTGCAAATTTACTTAACATCCTGGAAAAACGAGTTCATGACAGCTTTATTTAGACATAATGTTTAGCAATATTGAGTTGTACTGTATTTCTTCGTCCATTCTCTTGTGTTAGGTTTTTTACTGTCAGCAGTTACGGATCCCAGCGCGTCTTTTGTTTAAATAAGATGTCTGCTCTggaaatatgttatttattgcttcttttttttttcgacagTAGCCCCTCACGAGAATGACATTATGATATGTGCGCAGTTTAACAGTAACTATGGTAACTGAGCTCTATCTGCTGTTGAATGGATCCTGTAGTAGTCATACTGTTACTTTGAACCACACTCTAAAGCAACAAGGCCAGTATGTAGGCGATGGGAATATGGGAAAAAATAATCGTCAGGGACTGTCGACCGAGTTACATAAGGACGCGTTACGTGAGTcataaactgtacatttaaatacagtttccTCAGATGTTGTTGCACCCATACCGTCTTCCATTTTGACTAGGactgatttgaataaaatggTGAACTGTT

Function

NR:

description
putative polypeptide N-acetylgalactosaminyltransferase-like protein 3 isoform X1

GO: NA

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259654.1 True 4177 mRNA 0.44 12 9949393 9965676

Neighbor

gene id symbol gene type direction distance location
flot2b flot2b,LOC107661103,LOC107727921,LOC106581211,LOC105011286 coding upstream 13937 9927268 ~ 9935456 (+)
p2rx8 LOC107672369 coding upstream 32281 9911656 ~ 9917112 (+)
mrm3a LOC107716545,LOC107582598,LOC107672374 coding upstream 102008 9844405 ~ 9847385 (+)
tada2a tada2a,LOC107661114,LOC107755391 coding upstream 252849 9679771 ~ 9696544 (+)
nek8 nek8,LOC107672375,LOC107758702,LOC107661116,LOC107592757,LOC107582647 coding upstream 362291 9577565 ~ 9587102 (+)
gdpd1 gdpd1,LOC107672421,LOC107554273,LOC107659934 coding downstream 121001 10086677 ~ 10092950 (+)
clptm1 clptm1,LOC107727917,LOC107715057 coding downstream 213590 10179266 ~ 10187171 (+)
relb LOC107715143,LOC107582588,LOC107701429,LOC107659928,LOC107727919,LOC107554269 coding downstream 224911 10190587 ~ 10199278 (+)
LOC122358538 NA coding downstream 272501 10238177 ~ 10241248 (+)
dhx40 dhx40,LOC107659925 coding downstream 321279 10286955 ~ 10299275 (+)
G105171 NA non-coding upstream 41475 9846835 ~ 9907918 (+)
G105168 NA non-coding upstream 105341 9843836 ~ 9844052 (+)
G105145 LOC107714397,LOC107672358 non-coding upstream 134003 9813991 ~ 9815390 (+)
G105109 LOC107727913,LOC108415199,LOC107672419,LOC107582599,LOC107714247,LOC107661107,LOC108277446 non-coding upstream 146276 9763871 ~ 9803117 (+)
G105225 NA non-coding downstream 163875 10129551 ~ 10131865 (+)
G105199 LOC107582590,LOC107715485,LOC107701431 non-coding downstream 184286 10149962 ~ 10169712 (+)
LOC122358545 NA non-coding downstream 206186 10171862 ~ 10177828 (+)
G105240 NA non-coding downstream 207631 10173307 ~ 10175622 (+)
G105242 NA non-coding downstream 212196 10177872 ~ 10178226 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 233704 9703426 ~ 9715689 (+)
G105011 NA other upstream 276048 9669634 ~ 9673345 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other upstream 325421 9588789 ~ 9623972 (+)
dhrs11b.1 dhrs11b,LOC107694033,LOC107592755,LOC107752375,LOC107582609,LOC107672392,LOC107758673 other upstream 397265 9549752 ~ 9552128 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 425419 9515955 ~ 9523974 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other downstream 127779 10093455 ~ 10110443 (+)
G105248 NA other downstream 239163 10204839 ~ 10207452 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other downstream 387485 10353161 ~ 10390600 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 756296 10721972 ~ 10728395 (+)
LOC122358628 NA other downstream 1404572 11370248 ~ 11372691 (+)

Expression


Co-expression Network