b3glcta (b3glct,b3glcta,LOC107756277,LOC107682850)


Basic Information

Item Value
gene id b3glcta
gene name b3glct,b3glcta,LOC107756277,LOC107682850
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 17489450 ~ 17549642 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259698.1
GACAACTCCTTACTTTTGTTCTACATAATAACATTTGTTTGATATTGTTAGTTCGCACAGATTTGATGATTTAAACGTTACCTTTGTTTCTCACAAAAGggacatgtttattttttttaaaaaaatctagctAGCACACAACAGTGTCTATTATTTCACACGTGGACaagacttaaaaacaaaactgttattAGGGTGGTCGTGACAGTCGTGTAAAAACTAATAGAAACGTGTAGCCTTCGGTGGGTCCATATGTTACAGTAAGATTGAAAGCTCTacgtttttatgtaatttattggAAAGTGGAATGCAAGTTATCATTTTAAAGAGTTTAAGTTAGGCCTACTTCATGGCTGAAGGCAAAGTATAAAGTGATGCGCCTCATTTAATCCTTTGCCGTGTTTTATCGAAAGTGGATGAAGCAGTTCCGCCGTTCCGCCTGACTAAACTGTCACACATttgcgaactatccctttaacaaacATTTCGATCGCGCTTGTAACGTCGGTGCCAAGCACTGCCCCTTTTGTAGTGGTTACCGACGCGGTCGCTAGAGGGCGCAGCTGAGACGCGCGTTCAACAGGAAATGTCTTCGCAAAACAAAGCTGGGTAATGATCGGCACGCACAGTAGTGACTGTTGGATACAGGATCAGTGCAAACACTCCGCTACTGCACATTTACAGCAAGCTGGCAGCGAGCGGTGCCTGCGCTTCTTTCTACTATGCTTTCCATAAACTCTCAAAACGGATACAACGTTGCCCGATGCTTCTTGCTCTGGTCGCTTGTGCCACTCATCGCTGCAAAGGGAAATGATGTGGAGAGTCCAACAAAGATCCGTGACACTGACAAACCTCCCTCTGAGAGTCAACTCGACTTGAGAGAAGTGGTGTTTGTCATCCAGAGCCAGAGGAACTCTTTCCATGTGCGGCAGGCGGAGAAACTCAGAAAAGACCTTCTGATGCAGACAAAAGCTCTCCAAGAGAGTCCCCCTGTCATCCTGCTGCTGCACACGCTGTCAGACAATGAGGGAGACTGGAGCATTCTCCCACTACTGCCTTAcTTGTCGTCACAGTTTGGCAAGAACTCATCTTGGATCATGTTTATAGAAGAAGACACCAGAGTGAAACTCCAAAAACTTCATGAAGTTCTCAAAAAATTTGACCGCAGAAAAGAGTGGTTTCTTGGCAAGCCTCTACATGATGAAGAGTCCACTATCATCCATCATTATGCCTTCTCTGAGAACCCTGCGGCTTTCGAGTACCCAGACTTCTCTGCTGGATGGGCCCTTAGCATCCCTCTTGTCAACAGgTTGAGAAGCAAAATAGAAGAGGAGCCATTAAAATCAGACTTCACCATAGATCTGAAACATGAGgTGGCACTGTACATCTGGGAGGACGGGAAGGGACTCCGACTGACAGGGGTTCCAGAGTTTTGCACAGTACCAGAACACAATCCAAGAGCTCAATACTGTGCCACCACTGTCAGCAACCAATCACCACTGTGTGGCCAGCCTGTTAAAGGCGACAACATCTTTGTAGCGGTGAAAACCTGCAAGAAATTCCATTCCGACAGAGTTCCCGTGGTGAAGAAAACATGGGGTAAACAAGCATCTCTGCTGGAGTATTACAGCGATTATGCCGATTCCTCTATACCCACCATTAATCTAGGAGTGCCAAACACAGAGAGGGGTCACTGTGGGAAAACATTTGCCATCTTAAGGAGATTTTTGAGCAGTCACGTGCCTAATACCGATTGGCTGTTGATTGTAGATGATGATACTATTATAAGCTTGCCCAGACTGCAGGCTTTGCTGAGCTGCTATGACTCCAGTGAGCCGGTGTGTCTGGGAGAGCGCTATGGGTATGGACTAGGTCAGGGAGGATACAGTTACATCACTGGTGGTGGGGGGATGGTGTTCAGTCGAGAGGCTGTGGTCCAGCTGTTGGCCAGCGGCTGTAAGTGCTACAGTAACGATGCTCCTGATGACATGGTGTTGGGCATGTGTCTCAACGCTCTACGAGTTCCTGTCACACACAGTCCCCTCTTCCAccagGCTCGTCCAGAGGATTACGCCAAGGAGTTTTTGGCCCACCAGACCCCCATTTCCTTCCACAAACATTGGAATATAGACCCTATCGCGGTGTTCAACAAGTGGTTAAAAAACGACAAACACGCAGAAGGACTACAGAAAAGCACTAAGGAGGAATTgtagtgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagtagtaacgtgtgtgtgtgtgtgtgtctggtctGCGTCATCATTGTGCGTCCttcatttttctcatgttttctaTATAGTGAATCTTGCACAAACGTGAATGGAAGGGTGCCTTCTGGTCTGTATGAATGCCCTTGACCGTATTTTCTTGGGAGCTGCATGTCTTAAATGTTTGTTGGagacatatttatattacacgATTATCACAACCTGCTCAAGGTTATTTgtaggtttatttttaaacacttttgttttctaaaagaaTGGAATTGTGAATTATAATATTGGAATTTACGATAAACTCTGAATCCCGTTGCCTTAAACCTGTTTTTGCAGTGTCCTGATTTCAGTATTAAACACAGAAACCAGCTGCATCTCATGACGAATGAGACTGTCGTGAa

Function

symbol description
b3glcta Enables glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; fin; head; heart; and trunk. Human ortholog(s) of this gene implicated in Peters plus syndrome. Orthologous to human B3GLCT (beta 3-glucosyltransferase).
b3glct Predicted to enable acetylglucosaminyltransferase activity. Predicted to be involved in protein O-linked fucosylation. Predicted to be located in endoplasmic reticulum membrane. Implicated in Peters plus syndrome.

NR:

description
PREDICTED: beta-1,3-glucosyltransferase-like

GO: NA

KEGG:

id description
K13675 B3GALTL; UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259698.1 True 2676 mRNA 0.45 15 17489450 17549642

Neighbor

gene id symbol gene type direction distance location
wdr95 wdr95,LOC107746697,LOC107704726,LOC107587932 coding upstream 11249 17463303 ~ 17478201 (+)
LOC122358547 tex26 coding upstream 26327 17460427 ~ 17463123 (+)
LOC122358675 LOC107757141,LOC107558992 coding upstream 53851 17434652 ~ 17435599 (+)
LOC122358674 NA coding upstream 56210 17432251 ~ 17433240 (+)
LOC122359453 or102-1,LOC107588280,LOC107746700,LOC107704728,LOC107657422 coding upstream 59319 17429181 ~ 17430131 (+)
rxfp2b rxfp2,rxfp2b,LOC107558987,LOC107683406 coding downstream 134 17549776 ~ 17566071 (+)
frya fry,frya,LOC107559014 coding downstream 22783 17572425 ~ 17623054 (+)
brca2 brca2,LOC107752535 coding downstream 74092 17623734 ~ 17635824 (+)
dchs1a dchs1a,LOC107587256,LOC107558986,LOC107683408,LOC108433795,LOC108278281,LOC107704701 coding downstream 111279 17660921 ~ 17750367 (+)
arfip2a arfip2a,LOC107587234,LOC107704786,LOC107559011,LOC107752500,LOC107682914 coding downstream 219562 17769204 ~ 17777553 (+)
G107468 NA non-coding upstream 9402 17479848 ~ 17480048 (+)
G107450 LOC108433790 non-coding upstream 31764 17454294 ~ 17457686 (+)
G107447 NA non-coding upstream 174789 17309345 ~ 17314661 (+)
G107443 NA non-coding upstream 288513 17200408 ~ 17200937 (+)
G107440 NA non-coding upstream 289837 17198455 ~ 17199613 (+)
G107477 NA non-coding downstream 16551 17566193 ~ 17566876 (+)
G107547 NA non-coding downstream 266490 17816132 ~ 17816825 (+)
LOC122358482 NA non-coding downstream 308265 17857907 ~ 17859804 (+)
LOC122358481 LOC107575069,LOC107748074,LOC107682967 non-coding downstream 504626 18054268 ~ 18072232 (+)
LOC122358786 NA non-coding downstream 893053 18442695 ~ 18443413 (+)
lyrm9 lyrm9,LOC107756492 other upstream 975229 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 1253109 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 1446185 16004869 ~ 16043265 (+)
G107107 NA other upstream 1605940 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 1777011 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 240203 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 282430 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 495375 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 1206701 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 1209940 18759582 ~ 18760497 (+)

Expression


Co-expression Network