oafa (oafa,LOC107709135,LOC107696006,LOC107586231,LOC107717291,LOC107657251,LOC107601720,LOC105912781)


Basic Information

Item Value
gene id oafa
gene name oafa,LOC107709135,LOC107696006,LOC107586231,LOC107717291,LOC107657251,LOC107601720,LOC105912781
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12883017 ~ 12896981 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259754.1
GATAATGAAGGAAGTGACGAATCCGCAATactaggagagagagagagagagagagagagagagagagagagggaaaaaaaactccagaagagaaaaacagaaagtaaGGTTGAAGTCAGCGTGAAGCGCGCTGTAGTGAATGAAGTCGAGTCTGCAGAAGCTCGCGAATCAAAGTTCCCTCAATGAGAGACGCGACACGAGTGCAAACACCAGATTGATCCGTGCGTGACGCGGCTCtcccaaatgtttatttaccaAACGTGAGCAGTCTCTACACCCGTTTCACAGGACTTTATGAATTCTCTCGTGTCTCCAGCTTCCGAGAAACACGGGTGAAGTTGTGAGAGCGGGGCCGCTGTGATGTTTTGCGGGGATCCGTCCGAAGAGTCTCGCGGAATGAGTCCGACCGCGTCGGCGGCTGTTATTCCCGTGGATTCTCCTTCTGAGCTCGCCTTTTGAGTTTTAGGACTGTCTGGAATGTTTGCGAGGCGGATTTCGCCGGGTTTAGTTCGGTTGACTGTTTTGCTTGGGCTGCTCGCGGCGTCTGTAACTCTCGGGTCTGCTTCGGAGCTGAAGGTGAGGGTTCGTCTGGCCGATGGACAGATCGCAGATGAACTTTTGGAGGCGGACAGCGAGAAAGACTCCATCACTGTGGAGTTTAAACAGGGAGACGGGACTCTTATAACTTTCGTGGCCGATTTCAAGCAGGATGTGAAGATCTTCCGGGCGCTGATCCTGGGAGAGCTGGAGAGAGGGCAGAGCCAGTACCAGGCGCTCTGCTTCATCACACGGCTCAGCCACAATGAGATCATCCCCAGCGAGTCCATGGCCAGACTCCGACAGAAAAATCCCCAGGCCATCCGCACAGCAGAAGAGAAGAGGAGCACGGAAGTGCTGGGCATGAACGTAGCAGTCAATTTGACACGGACGTGGCAGCTGAGCGCCCACATCCACAACATGTGCAGCGTCGCCCGTGAAGCAGTGTACACGCGCGAGGCTGATGTCAGACACTGGCTGGACAGAGGCGTGGAGGGCTCCATGTTCGAGCCTCAAGCCGCGGAGGTGGCAGGCCTGCAGCGCTGCGGGACAGTGAAGGACCTGTGGCAGCCTTGCTCCTGCAGCTATAACCTCAGACTGGAATGGTACCCCTGCCTGCTGAAATACTGCCGCAACAGAGACGTCTCCGGCAAGGGCAGCCCGTATAAATGCGGCATCAAGAGCTGCAGCAAAGGCTACCAGTTTACTTACTACGTGCCCCACAAACAGCTGTGCCTATGGGAGGAAGAGACCTAGAAccacatacgcttctgcaaaaaacatatttaatgtgaCCTTGGCCACCTCCAAGCCTTCAGACTCGTGCCTTCTGCGCGGAGCAGAGATGGTGCTGGGCGGAGCGGGATTTGAGCGGTTTGCCACGTTTTAGAGCTGGTCGGTAGTCTTCAAGCTCTTTACCAGCACTGTGGGATGGAACTGAGACCCAAACGAGTCTGGGATGAGCAACCTGTGAATTAGTACGTATATAGCTGGAtctcgtctttttttttcagaaactggtattatttattttgctgtggGATACGACTGAAGACACGTTTAGAGCGCGGCGCACACGTTTagaaaaaatgtcttttggTAGTTTGCTATTTTTGACTGTTAGCTACAAAACACTGTGGTATAAATGTACGCATGCTTTGATTAATATTGGAACACTCAGAAAACACTATCGAGTCATTGTCTCACCTCAAGTCTTAATGCtgggattttcattttcatcgtCTTGCCTTAACTCCGTTGCACAACAGCAGAAACTTAAGGACCAGTTGGATCGATGCAGTATGGACTCTGGTTAGCTGGGAACAGGCCACACTTCAAAAGTGACTCGAGGAAACCAAAGTAAGTGTAGGCTCTGAGGGACAGAAAGCGTGCCGATGAAATCCTGTCGCTGCTGTGTGTCCAACACTGCCATCTTCTGGCTGCGCTGCGTTACTGTCGCTCAGGCTCCTCCTTTCAGCGTGATCTCAGAACATCAGCAGAGCCCTGAAACCATCGCTAATACGCTGGATTCATTTAACAGGACCAAATCCACAGACCGAGCTCTGTCGTGAAGAAGAGACTCTGTATTGTCGTTTCACACTTCACCACGTTCACCTCTAACCCGCGTCTGGCCTCTCTTACCACGTGAATGTTCGCTTTTTAATACGCCACAGGTGACTCGGTCGCCGTTCATGGTACTAAAATgtttatgctgatttatttaattttgtttcaaagagtttaagtgtttttttttttttttttggagattaCACCTCCCCAAACAACAGCCATTGTCTGGGATACAAGTGCCTTGGTGATTTCAGTGTTTACTGATTGTTTTTAAGGATAAAGCTGGTATGAATAAAGTATCGAAACTATTTTCCTATGAAAATGAATATGAGCATAATATgaagtaattttaaataaaaagctccTTCAGCAAA

Function

symbol description
oafa Orthologous to human OAF (out at first homolog).

NR:

description
PREDICTED: out at first protein homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259754.1 True 2483 mRNA 0.49 4 12883017 12896981

Neighbor

gene id symbol gene type direction distance location
pde9ac LOC107709113,LOC107586298,LOC108277474,LOC103353371,LOC107717273 coding upstream 14364 12861778 ~ 12868653 (+)
hepacama hepacama,LOC107657237,LOC107696005,LOC107717272,LOC107709103,LOC107601688,LOC107586299 coding upstream 24517 12852856 ~ 12858500 (+)
ankk1 ankk1,LOC107670957,LOC107709133,LOC107657242,LOC107717268,LOC107586301,LOC107601704 coding upstream 149589 12727956 ~ 12733428 (+)
LOC122359478 LOC107709099,LOC107586280,LOC107657254,LOC107657227,LOC101882848 coding upstream 156744 12718060 ~ 12726273 (+)
ttc12 LOC107709098,LOC107670956,LOC107717260,LOC107601681,LOC107657228 coding upstream 166533 12703450 ~ 12716484 (+)
tlcd5a tmem136a,LOC107709136,LOC107601721,LOC107586230,LOC107717274,LOC107657235,LOC107696007,LOC108436527 coding downstream 1066 12898047 ~ 12902460 (+)
arhgef12a LOC107709137,LOC107696008,LOC107586229 coding downstream 6025 12903006 ~ 12942649 (+)
grik4 grik4,LOC108439963 coding downstream 60116 12957097 ~ 13219219 (+)
cbl cbl,LOC107718267,LOC107601723,LOC107690460 coding downstream 329522 13226503 ~ 13251217 (+)
rnf26 rnf26,LOC107718270,LOC107601726,LOC107690456 coding downstream 390298 13287279 ~ 13291108 (+)
G106157 LOC107670963,LOC107731150,LOC107586232 non-coding upstream 102642 12773457 ~ 12780375 (+)
G106171 NA non-coding upstream 110947 12771795 ~ 12772070 (+)
G106161 NA non-coding upstream 141940 12738051 ~ 12741077 (+)
LOC122358874 NA non-coding upstream 301215 12580364 ~ 12581802 (+)
G105987 NA non-coding upstream 343575 12538531 ~ 12539442 (+)
LOC122358384 NA non-coding downstream 48096 12945077 ~ 12955807 (+)
G106234 NA non-coding downstream 361255 13258236 ~ 13798248 (+)
G106276 ube4a,LOC107743704,LOC107718272 non-coding downstream 438327 13335308 ~ 13336677 (+)
G106350 NA non-coding downstream 783199 13680180 ~ 13685449 (+)
G106354 NA non-coding downstream 795398 13692379 ~ 13692893 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 34350 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 785371 12093957 ~ 12097646 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other upstream 852468 12027555 ~ 12030549 (+)
LOC122358628 NA other upstream 1510326 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 2154622 10721972 ~ 10728395 (+)
G106376 cluh,LOC107685050 other downstream 1019592 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 1060216 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 2015930 14912911 ~ 14928225 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 2809532 15706513 ~ 15712439 (+)
G107107 NA other downstream 2984133 15881114 ~ 15883510 (+)

Expression


Co-expression Network