zpld1b (si:ch211-229d2.5,LOC107662750,LOC107586294,LOC107726089,LOC107729095,LOC107597577,LOC107699883)


Basic Information

Item Value
gene id zpld1b
gene name si:ch211-229d2.5,LOC107662750,LOC107586294,LOC107726089,LOC107729095,LOC107597577,LOC107699883
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11766663 ~ 11772646 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259785.1
GTTGAAATGGAGTGGATATGTCTTCTTCCTCTTGTGCTTTTCTGTGGGATTCATTCGGCTTTCGCACAGTTTAACGGATTCAACTGTGATCCAAACTACCACAGCAGATTCCCTGgTGAGAGAGATATCAGTGTATACTGTGGCGTTCAGACGATCACACTAAAGATTAACCTCTGTCCTGTGCTGTACTCTGGATACACCGATGCTGACCTGGCTCTCAACAGTCGTCATGGAGATGCCCAATGCAAGGGCTTCATAAACAACAACACTTTTCCAACAGCTATGCTCTTCAGTATCAGCCTGAGCACACTGGAGGCCTGCGGAAACACGCTGGAGGTTTCTTCATCTCAAGGCTTTAATGCCTATGGGAACATCTCCATGGTACAGATGGGTAATATATCAGGCTACATCGACACCCCAGACCCTCCAACTGTTATCAGCTACCTGCCAGGTCTGGTGTATAAATTCAGCTGTAGTTATCCTCTGGAGTACCTGCTCAATAACAGCCAGCTGGCAGCCTCGTCTGCTGCAATATCAGTGAAAGACAACAACGGCACTTTCCTGAGCACTCTCAGCCTAGTGCTTTACAATGACTCAACCTTCAGTCAGCTGATCTCTATACCAGTGTCCGGCCTGTCCTTGAAGACTCGCGTGTTTGCTGCGGTTAAGGCTACAAATCTGGACAGGAGGTGGAACGTTCTGATGGATCACTGTTACGCCACCCCCTCTGGGAACCCTAATGATGGGATACGCTACGACCTTTTCTTTGGGTGCTACAAGGACCCGCAGACGACTGTATTCGAGAACGGGAAAAGTCAAATGGGCCGCTTCGCGTTTGAAGTTTTCCGTTTCGTGAAACATAAGAACCAGAAGATGTCCACCGTGTTTCTGCACTGCATCACAAAGCTGTGCCGAGTGGATGACTGCGCAATACTAATGCCGATTTGTGGAAAACGCAGAAGGAGAGACACTGTGGAGGAGAATGTGGTGTCAGGTTCATCCTCAGGGGATGCCGTCATAACCGCAGGCCCCATAATCACGAGGAGCGATGAGTCTCCAGCCAACAACTCCCAACTTGCGAGCGGATCCCCGCAGCACCTGAGTGTTGTAACCAGTGCCTTGATATCAGGTGTGGTTGTGCTGGGTGTGACGAGTCTGGGCCTCTTCATCCTCTCCCTCAGGCTGCTCAGGAAGCCCGGCCCTTCTAGTCTGACAGGGGTCAGGAACCCCAGCTTCAGATGA

Function

symbol description
si:ch211-229d2.5 Predicted to be an extracellular matrix structural constituent. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and extracellular space.

NR:

description
PREDICTED: zona pellucida-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259785.1 True 1242 mRNA 0.51 10 11766663 11772646

Neighbor

gene id symbol gene type direction distance location
si:dkey-4p15.5 LOC107662772,LOC107729104,LOC107699895,LOC107597533,LOC107586295 coding upstream 40797 11718927 ~ 11725866 (+)
lim2.3 lim2.3,LOC107748598,LOC107699889,LOC107597599,LOC107662761,LOC108435296,LOC103047043,LOC108277938 coding upstream 52668 11711505 ~ 11713995 (+)
zgc:77784 LOC107582568,LOC107662767,LOC107699896,LOC107748585,LOC107597576 coding upstream 61700 11655855 ~ 11704963 (+)
acad8 acad8,LOC107582571,LOC107713443 coding upstream 187024 11575570 ~ 11579639 (+)
vps26b vps26b,LOC107582573,LOC107699898,LOC107748589,LOC107597524,LOC107713444 coding upstream 193215 11567390 ~ 11573448 (+)
si:ch211-229d2.5 LOC107726094,LOC107662759,LOC107586313,LOC107699888,LOC107597602,LOC107729100 coding downstream 3224 11775870 ~ 11779693 (+)
alcamb LOC107726107,LOC107662775,LOC107586292,LOC107699891,LOC107597537,LOC107729116 coding downstream 17295 11789941 ~ 11806948 (+)
dyrk1ab dyrk1a,LOC107726100,LOC107662773,LOC107586271,LOC107597536,LOC107729114 coding downstream 35561 11808207 ~ 11820288 (+)
trnap-cgg_29 NA coding downstream 47915 11820561 ~ 11820632 (+)
thap12b prkrirb,LOC107586270,LOC107662777,LOC107729129,LOC107699890,LOC107597535,LOC107726109 coding downstream 49437 11822083 ~ 11827093 (+)
G105739 NA non-coding upstream 3974 11762395 ~ 11762689 (+)
G105736 NA non-coding upstream 11144 11753527 ~ 11755519 (+)
G105730 NA non-coding upstream 37513 11726547 ~ 11729150 (+)
G105650 NA non-coding upstream 210365 11555878 ~ 11556298 (+)
LOC122358459 NA non-coding upstream 289124 11474428 ~ 11477539 (+)
G105819 exoc3l2b,LOC107662783,LOC107586290,LOC107729130,LOC107597542 non-coding downstream 128705 11901351 ~ 11903829 (+)
G105860 NA non-coding downstream 297653 12070299 ~ 12070863 (+)
G105870 NA non-coding downstream 319208 12091854 ~ 12093153 (+)
G105880 NA non-coding downstream 433762 12206408 ~ 12248991 (+)
G105890 NA non-coding downstream 479243 12251889 ~ 12252728 (+)
LOC122358628 NA other upstream 393972 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 1038268 10721972 ~ 10728395 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 1376063 10353161 ~ 10390600 (+)
G105248 NA other upstream 1559211 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 1656220 10093455 ~ 10110443 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 254909 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 321311 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 1064936 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 2143927 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 2184551 13957197 ~ 13961807 (+)

Expression


Co-expression Network