XLOC_006700 (wdfy4)


Basic Information

Item Value
gene id XLOC_006700
gene name wdfy4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30985047 ~ 31008275 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012907
AGAGAAAAACTCAGTGACCCCGAGCTGCAAGCGCTGGTCATATGATGACATCAAAGAGGCCAATTTCATGCGCTTTCTGCTTGAGGACAATGCTCTGGAAATATTCTTAAAGAACGGAACTTCAGTGTTCCTAGTTTTCTTCAACAATGACCACGTCAATGCATATAAAAGGTTGTGCTCTGTGGTCTCCTCATTAAAGGGAAGGGGAGAGACTGTGCTTAATGTGAGCAGGTCTGGCCTGCTCTTTGTGAAAACCAGGAGAAAAACATCAGCAGTTGAGAAGACCGTCTTAATTAAATGGCAGaGGGGTGAAATCAGCAACTTTGAATACCTCATGCATCTAAACACACTTGCTGGACGGACCTACAATGACTTGATGCAGTATCCTATCTTTCCCTGGGTCATCGCTGATTATGAATCAGAGACTCTGGATCTGTCCAGTCCTGCTACATTCAGAGATTTGTCTAAACCAATGGGAGCTCAAACTGAGAAGAGAAAAGAGAAGTTTATTCAGAGATACCTTGAAGTGGAAAATAATGATGGTGATTTGTCAGCTCAGTGTCATTACTGCACACACTATTCCTCAGCCATCATAGTGGCCTCATACCTAGTGAGGATGGAGCCTTTTTCCCAGACCTTCCTCCAGCTGCAGGGTGGAACATTTGATGTTCCAGAACGGATGTTCCACAGCATTCAGAACGAGTGGGAATCTGCATCTAAGGACAATATGAGTGATGTCAGAGAGCTCATTCCAGAATTTTTTTACCTCCCGGACTTTCTTGTTAATTCCAACCAgtttgactttgGCTGCATGCAGGATGGGACACCATTAAATGATGTGGTTTTGCCGCCATGGGCAAAAGGAGACCCCCAGGAGTTCATCAGAGTACACAGAGAGGCTCTTGAGAGTGATTATGTGAGCTCACGTCTGCATCTTTGGATTGATCTGATCTTCGGCTACAGGCAGCAGGGAATGCCTGCAGTCGAGGCCCTCAACACCTTTCACCCCTACTTCTACACTGACAAACACGATAGAGCCAGCATGAAGGATCCTGTCATGAAAAGCACTATGCTTGGCTACATCAACAACTTTGGCCAAATGCCAAAACAGATTTTCACAAAACCCCATGCAAGCCGTACGCCCAACAAGAGTACTGCTGGAAAGGAGACTTCGGTATCCAGTCAGATAACCCCATTTTTCTTTAAATTGGACAAGCTCAAGCCCTCCGCTCAGGCAGTAAAAGagGTCTCATTGGGGCCTGTTGGTCAGATAGTGTGTAAAGAGAAGGATGTGCTGGTCGTGGAAAAAAACAAACTTCTCATCCCTCCACAGTTGAACACATACTTCTGCTGGGGCTCTTATGACCAAACCTGCTCCTTTGGAAGCTACACTGGAGAAaagAGCTTTGGAGTGTGTGAGAGCCTGTCAGACTGGGGAGAGCCTGTGTGTGCTGCCTGTCCTAACAACAGCACCATCATCACAGCCGGGACAAgcactgtagtgtgtgtgtgggatgtTTTCATAAGCAAGGACAAACTCAAACATATGAGATTAAAACAGACCCTGTATGGACACACAGACACAGTGACGTGTCTGGTAGCATCTGAAGCTCATAGCATGATTATTAGCGGCTCCCTGGACCAGACCTGCATCCTGTGGGACCTGGAGGACCTCAGCTACATAACGCAGTTACCAGAACATTCCTCTGCTGTGTCTGCCCTGGCTATTAATGACCTGACCGGTGAGATTGTGTCTTGCGCAGGCACGCATTTATACCTGTGGACCATGAAGGGGCAGCTACTGGCCTCCATTAACACTTACTATGAACCTGAAGGAAACATTCTGTGCTGCTGTTTCACTCAAAAACATGAGTGGGACCCTCGCAACGTGATCATCACTGGCAGCGCCGACGGTGTCGTCCGGATATGGAAGACTGAATATACTAGAGTACAATTACCTGGACATGAGGAGTGCTCGGTGTCTCAAGGGCATGTTTTGTCATCTGCTCCTGAGGAAGCAG
>TCONS_00012908
ATGCCTGCAGTCGAGGCCCTCAACACCTTTCACCCCTACTTCTACACTGACAAACACGATAGAGCCAGCATGAAGGATCCTGTCATGAAAAGCACTATGCTTGGCTACATCAACAACTTTGGCCAAATGCCAAAACAGATTTTCACAAAACCCCATGCAAGCCGTACGCCCAACAAGAGTACTGCTGGAAAGGAGACTTCGGTATCCAGTCAGATAACCCCATTTTTCTTTAAATTGGACAAGCTCAAGCCCTCCGCTCAGGCAGTAAAAGagGTCTCATTGGGGCCTGTTGGTCAGATAGTGTGTAAAGAGAAGGATGTGCTGGTCGTGGAAAAAAACAAACTTCTCATCCCTCCACAGTTGAACACATACTTCTGCTGGGGCTCTTATGACCAAACCTGCTCCTTTGGAAGCTACACTGGAGAAaagAGCTTTGGAGTGTGTGAGAGCCTGTCAGACTGGGGAGAGCCTGTGTGTGCTGCCTGTCCTAACAACAGCACCATCATCACAGCCGGGACAAgcactgtagtgtgtgtgtgggatgtTTTCATAAGCAAGGACAAACTCAAACATATGAGATTAAAACAGACCCTGTATGGACACACAGACACAGTGACGTGTCTGGTAGCATCTGAAGCTCATAGCATGATTATTAGCGGCTCCCTGGACCAGACCTGCATCCTGTGGGACCTGGAGGACCTCAGCTACATAACGCAGTTACCAGAACATTCCTCTGCTGTGTCTGCCCTGGCTATTAATGACCTGACCGGTGAGATTGTGTCTTGCGCAGGCACGCATTTATACCTGTGGACCATGAAGGGGCAGCTACTGGCCTCCATTAACACTTACTATGAACCTGAAGGAAACATTCTGTGCTGCTGTTTCACTCAAAAACATGAGTGGGACCCTCGCAACGTGATCATCACTGGCAGCGCCGACGGTGTCGTCCGGGTACGAAACATTTCTCTCAGAAAGACGATTGGGCGTAGCTTTCACGTAGCCAACTTTATAATGAGAGTGCTTAAATGA

Function

symbol description
wdfy4 Orthologous to human WDFY4 (WDFY family member 4).

GO: NA

KEGG:

id description
ko04131 Membrane trafficking

ZFIN:

id description
ZDB-GENE-090313-322 Orthologous to human WDFY4 (WDFY family member 4).

Ensembl:

ensembl_id ENSDARG00000077009

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012907 False 2021 mRNA 0.47 17 30985047 31008275
TCONS_00012908 True 1029 mRNA 0.49 6 30985499 30996072

Neighbor

gene id symbol gene type direction distance location
XLOC_006699 CR762493.2 coding downstream 112608 30855319 ~ 30872439 (-)
XLOC_006698 NA coding downstream 172864 30808963 ~ 30812183 (-)
XLOC_006697 tmem72 coding downstream 271811 30704361 ~ 30713236 (-)
XLOC_006695 rassf4a coding downstream 284587 30664819 ~ 30700460 (-)
XLOC_006696 CT025887.2 coding downstream 299134 30684186 ~ 30685913 (-)
XLOC_006701 wdfy4 coding upstream 7272 31015547 ~ 31017960 (-)
XLOC_006702 wdfy4 coding upstream 16436 31024711 ~ 31025505 (-)
XLOC_006703 BX005005.3 coding upstream 34239 31042514 ~ 31051156 (-)
XLOC_006704 BX005005.2 coding upstream 44261 31052536 ~ 31061816 (-)
XLOC_006705 BX005005.1 coding upstream 67558 31075833 ~ 31075947 (-)
XLOC_006471 BX537274.2 misc downstream 20720142 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 30158822 825904 ~ 826225 (-)
XLOC_006693 CT025887.1 non-coding downstream 352828 30632105 ~ 30632219 (-)
XLOC_006691 NA non-coding downstream 413904 30568567 ~ 30571143 (-)
XLOC_006690 NA non-coding downstream 433538 30549409 ~ 30551509 (-)
XLOC_006706 NA non-coding upstream 81311 31089586 ~ 31092400 (-)
XLOC_006707 NA non-coding upstream 94632 31102907 ~ 31122838 (-)

Expression


Co-expression Network