LOC122359584


Basic Information

Item Value
gene id LOC122359584
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11377405 ~ 11379430 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259947.1
GATCCATTCATGGAAATGGGAGCGATCGGTgctttatcactgtgtGTGGAAACACCTAGAGCCGTGTTTGGTGTGCCCCTCATTAGTCTGAGGAAGAGTGGACAGATGAGGCAGGGTCTTCCTCTGGCGCTCACACACATGGTGGAGTTTGTGGAGAAGCACGGTCTCAGCAAGATCGGCCTGTTCATAGTCGGCGGATCAGTACAACGCTGCAGGGACCTAAAGAAAGGTTTCGATGATGGAGGCTTTCCAGAGCGTGACAGTAGGGATGTAGATACTTGGGCCTCCTTACTGAAACATTTCCTCAAGGAAATACCTGGTGGACTTATCCCGGAGCCACACAAGACACAACTGCTGCAGGTGTTCAGGGATTCAAAAAAAGAAGAGCTGAATCAGGCTTTGAGGACTGTGCTGAAGACTCTTCCAGAGGAACATTTCAATGTCCTCTGTTATCTAATGTACTTCCTGTCCCGTGTTGCCGCTGAGAGTCATTTCAATCGAATGACATCTACAAAGCTGGCAAGCGTTTTTGGATCCAACATCTTTCACGTTCCTTTCAGCCCCACCATGTTTAAGGAACAGGGGCAGTGTAATGCTTTGATTAAGCACCTGCTGGACAATCTGATCCACCTGCTGCCAGACATGTATCTTCATGCATCCGCCAGCAACACAGCAattaaagGTTACCAAAACTGGACGACTTGGGCGAATGAGAAAACGATTCAGAGGTTTTTGGAGGAATTTGTGCTCATGCACTCACAGCAGTGACATAGAGCATGAAAAAGCCTCTGGAGACCAGATATAGAAGAGTAAAGAAACATGAGGGATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259947.1 True 831 mRNA 0.48 7 11377405 11379430

Neighbor

gene id symbol gene type direction distance location
LOC122358473 LOC107701401,LOC107713429,LOC107582582,LOC107659936,LOC107717183 coding upstream 79685 11291353 ~ 11297720 (+)
LOC122358387 LOC107717180,LOC107597510,LOC107713465,LOC107582585 coding upstream 118024 11255323 ~ 11259381 (+)
LOC122359111 pou2af1,LOC107582583,LOC107717181,LOC107713464,LOC107597594 coding upstream 205202 11162084 ~ 11172203 (+)
LOC122359106 LOC107582581,LOC107713463,LOC107701416,LOC107597512,LOC107717185,LOC107659920 coding upstream 238781 11135353 ~ 11138624 (+)
cadm1b cadm1b,LOC107713448,LOC107582575,LOC107662762,LOC107699904,LOC107748594,LOC108435304 coding upstream 348627 10882534 ~ 11028778 (+)
jam3a jam3a,LOC107699899,LOC107662760,LOC107597526,LOC107713445 coding downstream 178583 11558013 ~ 11566017 (+)
vps26b vps26b,LOC107582573,LOC107699898,LOC107748589,LOC107597524,LOC107713444 coding downstream 187960 11567390 ~ 11573448 (+)
acad8 acad8,LOC107582571,LOC107713443 coding downstream 196140 11575570 ~ 11579639 (+)
zgc:77784 LOC107582568,LOC107662767,LOC107699896,LOC107748585,LOC107597576 coding downstream 276425 11655855 ~ 11704963 (+)
lim2.3 lim2.3,LOC107748598,LOC107699889,LOC107597599,LOC107662761,LOC108435296,LOC103047043,LOC108277938 coding downstream 332075 11711505 ~ 11713995 (+)
G105628 NA non-coding upstream 38472 11338265 ~ 11338933 (+)
G105623 LOC107729090,LOC107662800,LOC107586245 non-coding upstream 46105 11330420 ~ 11331300 (+)
G105622 LOC107662753,LOC107729089,LOC107662756,LOC107717280,LOC107657263 non-coding upstream 47085 11329925 ~ 11330320 (+)
G105601 LOC107713465,LOC107717180,LOC107597510 non-coding upstream 192303 11180032 ~ 11185102 (+)
LOC122359117 NA non-coding upstream 276978 11098854 ~ 11100427 (+)
LOC122358459 NA non-coding downstream 94998 11474428 ~ 11477539 (+)
G105650 NA non-coding downstream 176448 11555878 ~ 11556298 (+)
G105730 NA non-coding downstream 347117 11726547 ~ 11729150 (+)
G105736 NA non-coding downstream 374097 11753527 ~ 11755519 (+)
G105739 NA non-coding downstream 382965 11762395 ~ 11762689 (+)
LOC122358628 NA other upstream 4714 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 649010 10721972 ~ 10728395 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 986805 10353161 ~ 10390600 (+)
G105248 NA other upstream 1169953 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 1266962 10093455 ~ 10110443 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 648125 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 714527 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 1458152 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 2537143 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 2577767 13957197 ~ 13961807 (+)

Expression


Co-expression Network