acad8 (acad8,LOC107582571,LOC107713443)


Basic Information

Item Value
gene id acad8
gene name acad8,LOC107582571,LOC107713443
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11575570 ~ 11579639 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259967.1
CGTGCCGATTGAACTCGTCACTGAATCAACATGGCGGCTGCTAGGGCACTCGCAAGAGGTGTCCGATTGGGTTCATATAGCATCGCTAGAAGTCgcagtttaatatttaacagtgtACAGAGACGAGGAATAGCAGCTTGCATTGATCCCTCCATAGGACTCACAGATGAACAAAAAGAGTTTCAAAAGGTGGCATTTGACTTTGCTGCCAATGAGATGGCGCCACACATGGCAGAATGGGACCAGAAGGAAATGTTCCCCGTGGAGGCCATGAGGAAAGCCGCCCAGCTGGGGTTCGGTGGGATTTACGTGAACCCTGACGTTGGGGGGTCTGGACTCTCTCGTCTGGACACCTCTATAATATTTGAGGCTTTATCCACAGGCTGTGTCAGCACTACAGCGTACATCAGTATTCACAACATGTGTGCCTGGATGATTGACACGTTTGGAAACCATGAGCAGAGGGAGAAGTTCTGCCCCGATCTCTGCTCTATGCAGAAGTTTGCCTCGTACTGCCTCACAGAACCCGGTAGCGGGAGCGATGCTGCTTCACTTCTAACAAGTGCAAAGCTCCAAGGAGATCATTATATCCTGAATGGCTCCAAGGCGTTCATCAGCGGAGGTGGAGACACGGATGTTTACGTGGTGATGTGCAGGACGGGTGGGAAGGGAGCTAAGGGCATCTCCTGTCTGGTGGTGGAAAAGGGAACCCCTGGACTCAGCTTTGgcaagaaagagaagaagGTAGGTTGGAACTCTCAGCCAACCAGAGCTGTGATACTGGAGGACTGCGCCGTCCCGGTGACCAATCGGCTTGGAGCAGAGGGGGAGGGCTTCAACATCGCCATGAAAGGCCTTAATGGAGGCAGAATTAATATTGCTTCTTGTTCCCTCGGGGCGGCTCACGCTTCTGTGCTTCTGGCCCGGGATCACATGCGTGTGCGGAAACAGTTCGGAGAAACACTATCGAACAGCCAGTTCCTGCAGTTCAAGCTGGCTGAGATGGCCACCAAGCTGGTAGCTTCTCGTCTGCTGGTCCGTCAGGCGGCGCTGGCTCTGCAGGAGGACCGGCCCGAGGCCGTCTCGCTCTGCTCCATGGCCAAACTCTTCGTGAcggatgaatgtttttctatatgtAACCAGGCTTTACAGATACATGGAGGTTACGGTTACCTAAAGGACTACGCGGTGCAGCAGTACGTCAGAGACATTAGAGTGCATCAGATACTGGAGGgtaCTAATGAAGTGATGAGGATGATCATTGCGAGAAGTTTGCTCACCGAGTCGTGATGCTGATTTATGGTCTCCTGTATCGGACTAAACCATCTCTTCGTTGTCTAAAATGTTGATCACACATGTAGGGTTAAGTGACTGTAATGTATTTCTATGTCCCACACGTGACTGCAGAGATCTGGTCTTCCACACTCCCGTGTCTGTCGATTTTGATCAGGAGGCATCAACGGTGTTTTATGCAGAAAGTTTGTGCCTTAATCTTGTGAATTTGTAAATGTAGATTACAGCGTTTCTTATAAAAGCACACCGACTCATTCGATTTGTTACGAAATATAAAACACAGCTAAGATTTAAGTGAAACATTTAGAAAAGTTACTGAAGCCGTTTAGTTTAAATCATGTAGTTAAGGCTAACAAATCCTCAAATCTGTTTCTTTAAGTACATATAGATATCAGATTAATTCGATGTTAGCACAGACAGTCCAATTATTTCAAATCGGGCATTATAttgtttgtctttattatataatataaataaatgttacttctGTGGCTTAAGCTGATGTGCaccttgttaaataaaaaagctgtttgGTGAAACTTTCCACAAA

Function

symbol description
acad8 Predicted to enable acyl-CoA dehydrogenase activity and flavin adenine dinucleotide binding activity. Predicted to act upstream of or within lipid metabolic process. Orthologous to human ACAD8 (acyl-CoA dehydrogenase family member 8).

NR:

description
isobutyryl-CoA dehydrogenase, mitochondrial isoform X3

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
K11538 ACAD8; isobutyryl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259967.1 True 1843 mRNA 0.47 11 11575570 11579639

Neighbor

gene id symbol gene type direction distance location
vps26b vps26b,LOC107582573,LOC107699898,LOC107748589,LOC107597524,LOC107713444 coding upstream 2122 11567390 ~ 11573448 (+)
jam3a jam3a,LOC107699899,LOC107662760,LOC107597526,LOC107713445 coding upstream 9553 11558013 ~ 11566017 (+)
LOC122359584 NA coding upstream 196140 11377405 ~ 11379430 (+)
LOC122358473 LOC107701401,LOC107713429,LOC107582582,LOC107659936,LOC107717183 coding upstream 277850 11291353 ~ 11297720 (+)
LOC122358387 LOC107717180,LOC107597510,LOC107713465,LOC107582585 coding upstream 316189 11255323 ~ 11259381 (+)
zgc:77784 LOC107582568,LOC107662767,LOC107699896,LOC107748585,LOC107597576 coding downstream 76216 11655855 ~ 11704963 (+)
lim2.3 lim2.3,LOC107748598,LOC107699889,LOC107597599,LOC107662761,LOC108435296,LOC103047043,LOC108277938 coding downstream 131866 11711505 ~ 11713995 (+)
si:dkey-4p15.5 LOC107662772,LOC107729104,LOC107699895,LOC107597533,LOC107586295 coding downstream 139288 11718927 ~ 11725866 (+)
zpld1b si:ch211-229d2.5,LOC107662750,LOC107586294,LOC107726089,LOC107729095,LOC107597577,LOC107699883 coding downstream 187024 11766663 ~ 11772646 (+)
si:ch211-229d2.5 LOC107726094,LOC107662759,LOC107586313,LOC107699888,LOC107597602,LOC107729100 coding downstream 196231 11775870 ~ 11779693 (+)
G105650 NA non-coding upstream 19272 11555878 ~ 11556298 (+)
LOC122358459 NA non-coding upstream 98031 11474428 ~ 11477539 (+)
G105628 NA non-coding upstream 236637 11338265 ~ 11338933 (+)
G105623 LOC107729090,LOC107662800,LOC107586245 non-coding upstream 244270 11330420 ~ 11331300 (+)
G105622 LOC107662753,LOC107729089,LOC107662756,LOC107717280,LOC107657263 non-coding upstream 245250 11329925 ~ 11330320 (+)
G105730 NA non-coding downstream 146908 11726547 ~ 11729150 (+)
G105736 NA non-coding downstream 173888 11753527 ~ 11755519 (+)
G105739 NA non-coding downstream 182756 11762395 ~ 11762689 (+)
G105819 exoc3l2b,LOC107662783,LOC107586290,LOC107729130,LOC107597542 non-coding downstream 321712 11901351 ~ 11903829 (+)
G105860 NA non-coding downstream 490660 12070299 ~ 12070863 (+)
LOC122358628 NA other upstream 202879 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 847175 10721972 ~ 10728395 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 1184970 10353161 ~ 10390600 (+)
G105248 NA other upstream 1368118 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 1465127 10093455 ~ 10110443 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 447916 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 514318 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 1257943 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 2336934 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 2377558 13957197 ~ 13961807 (+)

Expression


Co-expression Network