LOC122358524


Basic Information

Item Value
gene id LOC122358524
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 8498434 ~ 8506724 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252618.1
tgttaaaaaataaatggcaaaaggcaattgcaataaaaaaaaaagtaaaaggccTGATTTTTCAGAACTGAAACTTACATAAAGCACCTAAAAAGgctaaaaatgtataacataGTGTTGATtatcgcaaaaaaaaaacataaaacaatcaaCTCATTTCTTATTCTCATAAAAAGTCACTAGAGATAACAGCGAGGCACTGGCAATGGCAACAAATGAGGTCAATTTGTTTGTATTATGAAgcttataattaaataaagtctTAAAAATCTGTACCTGGTAAAACTTGTGTGTAATTGGAGCTAAGTTGTGTTGGTTTTGGGGTTGCGTTGCCATAGCAAAGTTGTACAGGGTATAATTTTACACCGAAATTATTAGTAAGTCATTTTTCCACATTCGGATCACTTCAGCGCTCGTACTGTTTGCGACTTGTGGCTATCCTTGAACATTTTACGGATTCGCTTCCATCACAACCCAGACATTTTGCTAAAGACAATGAGGGACTAGTggaactttagttttttttggtgttCAAGCCTCTAGCGCTGACAGCACTGAACCTGGAATAGCTCTTTAAGGAATAAAGCCGTGAGCCATATTCAGCGTGCAGGAAGTCCTGTGAGGGTTTCGCGTTATCCACGTGATTTCAGGGTTCAAGGTGTGCTCTGAAGTTAAGATCGTGGAAATTGCATTTCTGCTTCAAGTAGCATAAAGGGAATTGCGCAACTCCCGCTCAGCGCAGACGTGCGCAGCGTCATGGAAACGCATCTGGCTTTTCTTCTGCCCCTGCAAGTTGCTGTCTAAGCCTGTCGAGGATTCGCCTGCCAAGAACGCAACGAGGTCGGATCCCAAGCAAGGAGCGTGTGCGGAAGGAACACATGTGGCCCGAAAATATGAGAGTCGAGAGCGAGAGATTGCTCAAATCACAGACGCTCGCTGCCAAATGGCTTGCATCTGTGGAGAAGTATTCTCGACCCTGACTGGAGGGAGGGTGTTTCCATTTCCAGTGTTACGATCCCATGAAAACTTCCTGTAAAACACGCCTGTTTTAGGAAATACGAACTGGGTTGCATTGAGTGGGATTTTGTGTGGAGTGTCCCGTTTGTATGTCGCTGTGCTAAAGTTGAAACTCACACGTCCTGTTGTTGTAGTTGTATGCTACGATATCTATAAGGCTTTTTTTTACGTAAGCGCACCGCGCCCTGCCATGGCCGGAGGGTAAAAGTAAGAGTTAGGATTAGGGGTGGGATTTCTCCCTCGTCTCTCCCTCATCTCTCCCTactgtgtttgtgcttttgcGTCATTAGCAAGCGGGCAAGCTTCTCCCCGGGGCTGCTGGGACGAGCGCTGCTGGAGTAAGGAATGTACCAAAAGCAGAGAGCATGTCTATAAAAGGAAGaatAAACATCTGCATACATCCCCACTGAGTGCTGTTTGGAGGCTACCGTCTCATCATTCAGTGCTTTCGTCAGCAGGGGGAGAGGACGGCTGCTTCTGAAACACATGTGGGATGTGGAGCTGTGACAGGATCACAAAGAGTGCCATTCAGCCCAGAGAGGCTCTGAAAACAGCAGCAGTCTCCCTTTGCTCTCCACCCTTTTGCTGCCTCCATCTGTGGCCTTATTTCCTCTAACTTCAGCGCCTCTCCCTTCGCAAAACACATAAAACCTCAAAGATTACAGAACCAGACTTTGTTACCCGAGAGAGAAAGGCCTTGAGATCCAAAGGCTTTGTTGAGTTGTTTTGGTCTAAAGCACTTTTCACAAATGCACAACAAAGGAACAAATCCTGTCTTTTTGTAGTGAGAGCTTTTAAGTCTGCTTGATTATGCCctattatataatatcaaatgaaGTTGTTGTGAAAAGTAAGTTTGGCTGGTGCTACGCCAGGACTCTTGATTTCTCAATGCCATACTGCAATTTAAATCATATAACAATGTCAACAATTAACTGTAGTAATGATAACTGATCtgtata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252618.1 True 1979 lncRNA 0.44 3 8498434 8506724

Neighbor

gene id symbol gene type direction distance location
zgc:162730 LOC107758447,LOC107684199,LOC107561375,LOC107678244,LOC107560634,LOC107749641 coding upstream 3504 8492796 ~ 8494930 (+)
LOC122359189 cyp2y3 coding upstream 80920 8415376 ~ 8417514 (+)
LOC122359295 cyp2y3,si:zfos-411a11.2,LOC107551273,LOC107689291,LOC107718919 coding upstream 93676 8401286 ~ 8404758 (+)
si:ch1073-83n3.2 si:ch1073-83n3.2,LOC107720429,LOC107572377,LOC107689292,LOC107551274,LOC107751035 coding upstream 102045 8386767 ~ 8396389 (+)
bace1 bace1,LOC107750106,LOC107663744,LOC107720461 coding upstream 146893 8342876 ~ 8351541 (+)
LOC122358974 clca4,LOC107749647,LOC107561373,LOC107678235,LOC107678237,LOC107577085 coding downstream 83133 8589857 ~ 8596429 (+)
LOC122358975 clca4,LOC107749647,LOC107678236,LOC107749648,LOC107561373,LOC107678235,LOC107758746 coding downstream 94376 8601100 ~ 8607207 (+)
LOC122358973 LOC107577085 coding downstream 101230 8607954 ~ 8623366 (+)
LOC122359139 LOC107749646,LOC107678243,LOC107560621,LOC107577085 coding downstream 144308 8651032 ~ 8655919 (+)
LOC122359133 zgc:162193,LOC107672386,LOC107758488,LOC107561378,LOC107749645,LOC107678257,LOC107560630 coding downstream 156083 8662807 ~ 8775588 (+)
G104480 NA non-coding upstream 2304 8495879 ~ 8496130 (+)
G104470 NA non-coding upstream 38081 8459901 ~ 8460353 (+)
LOC122359586 NA non-coding upstream 42805 8454830 ~ 8455629 (+)
G104463 NA non-coding upstream 60075 8433348 ~ 8438359 (+)
G104447 NA non-coding upstream 127588 8352334 ~ 8370846 (+)
G104483 NA non-coding downstream 2857 8509581 ~ 8509806 (+)
G104504 NA non-coding downstream 101992 8608716 ~ 8658108 (+)
G104508 NA non-coding downstream 195349 8702073 ~ 8763452 (+)
G104524 NA non-coding downstream 355454 8862178 ~ 8880419 (+)
G104875 NA non-coding downstream 411263 8917987 ~ 8920164 (+)
G104466 cyp2y3 other upstream 80970 8401311 ~ 8417464 (+)
LOC122359395 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 540019 7957364 ~ 7958415 (+)
igsf10 LOC107750112,LOC107551235,LOC107720411,LOC107572519,LOC107680809,LOC107703022,LOC107720412 other upstream 735861 7752245 ~ 7762573 (+)
sptssb sptssb,LOC107567691,LOC107703014,LOC107750122,LOC107662593,LOC107551237 other upstream 873990 7621699 ~ 7624444 (+)
G104361 NA other upstream 878596 7619062 ~ 7619838 (+)
LOC122358505 clca4,LOC107749648,LOC107758746,LOC107678237,LOC107577085,LOC107678235 other downstream 122136 8628860 ~ 8633971 (+)
LOC122358602 LOC107749646,LOC107678243,LOC107560621,LOC107577085 other downstream 241079 8747803 ~ 8752818 (+)
LOC122358603 LOC107749646,LOC107678243,LOC107560621,LOC107758746,LOC107561373,LOC107577085 other downstream 249603 8756327 ~ 8761416 (+)
LOC122358919 armc9,LOC107668662,LOC107668488,LOC107720734 other downstream 745784 9252508 ~ 9280469 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 1009231 9515955 ~ 9523974 (+)

Expression


Co-expression Network