LOC122358786


Basic Information

Item Value
gene id LOC122358786
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 18442695 ~ 18443413 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252642.1
AGGCATGGGGGCCACAGTCTGAACCGCAGGAAGATTCTTGCTGGTGGCTCCATTCGCAAAgctggaggaagaggaagtggatgCATCTGTGGCTCCTGTGACACAACAAGAAAAATCCACCAATGGTGTAACTCGCCGTGAAGTTTTTCACTTTACATCCTCGCCAGCTGTCATCTAAACCTTCAGTCGCACTAAAATCAAACACCCTTTCTGGTTTTTCATCAGCCAGTGTCCACAGCGCCCTGTGCAGCAGGGAGCTTCTGATAGATACATCACAGCAATGGACTGTCATCCTGTGAAACCACGGGCTGTCACGGGACATCTGAGAATGGGAAATCTATTACGCAGCCATCAATCGCCGTGTCAGAGATGAGTGTCCACCCATAAGCAAATACACCGAGATGAGGGGAAACGTCAAGAGGGACATTCTGATGGATTCTGCTGGAAGCACAGCTCAGCAGATCTCAATGAGGTTTATGATGGACAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252642.1 True 490 lncRNA 0.50 3 18442695 18443413

Neighbor

gene id symbol gene type direction distance location
mab21l1 mab21l1,LOC107730834,LOC107683054,LOC107587182 coding upstream 45987 18388927 ~ 18396708 (+)
dclk1b LOC107752421,LOC107704780,LOC108433804,LOC107683036,LOC107730822,LOC107582281 coding upstream 125516 18284959 ~ 18317179 (+)
spartb spg20,LOC107752446,LOC107683015,LOC107730857 coding upstream 159485 18270036 ~ 18283210 (+)
postnb LOC107704781,LOC107752481,LOC107587216,LOC107730854,LOC107582252,LOC107682985 coding upstream 188644 18240649 ~ 18254051 (+)
trpc4b trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445,LOC108433784 coding upstream 205390 18221272 ~ 18237305 (+)
inpp5ka inpp5ka,LOC107704774,LOC107582245,LOC107683418,LOC107730810 coding downstream 269052 18712465 ~ 18720857 (+)
tekt1 tekt1,LOC107752352,LOC107704722,LOC107730869,LOC107587856,LOC107577743 coding downstream 277876 18721289 ~ 18724361 (+)
LOC122358577 NA coding downstream 281110 18724523 ~ 18727556 (+)
LOC122358576 NA coding downstream 284278 18727691 ~ 18734238 (+)
tmem106ba tmem106b,LOC107704771,LOC107587075,LOC107752274,LOC107582242,LOC107730846,LOC107683194 coding downstream 323439 18766852 ~ 18770394 (+)
LOC122358481 LOC107575069,LOC107748074,LOC107682967 non-coding upstream 370463 18054268 ~ 18072232 (+)
LOC122358482 NA non-coding upstream 582891 17857907 ~ 17859804 (+)
G107547 NA non-coding upstream 625870 17816132 ~ 17816825 (+)
G107477 NA non-coding upstream 875819 17566193 ~ 17566876 (+)
G107468 NA non-coding upstream 962647 17479848 ~ 17480048 (+)
G107688 NA non-coding downstream 82192 18525605 ~ 18526233 (+)
G107689 NA non-coding downstream 90136 18533549 ~ 18534339 (+)
G107693 NA non-coding downstream 116067 18559480 ~ 18559755 (+)
G107713 pds5b,LOC107587120,LOC107582244,LOC107683122,LOC107730842,LOC107752691,LOC107704775 non-coding downstream 226917 18670330 ~ 18675897 (+)
G107752 NA non-coding downstream 301193 18744606 ~ 18747021 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other upstream 325742 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other upstream 395791 18045017 ~ 18046904 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other upstream 631492 17789845 ~ 17811203 (+)
lyrm9 lyrm9,LOC107756492 other upstream 1928474 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 2206354 16089757 ~ 16236341 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 312930 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 316169 18759582 ~ 18760497 (+)
si:dkey-30e9.6 LOC107683422,LOC107752859,LOC107588226,LOC107704721,LOC107582296,LOC107730865 other downstream 350667 18794080 ~ 18795982 (+)
G107777 NA other downstream 398863 18842276 ~ 18843855 (+)
LOC122358990 LOC107586958,LOC107704764,LOC107752630 other downstream 549932 18993345 ~ 18995991 (+)

Expression


Co-expression Network