LOC122360679


Basic Information

Item Value
gene id LOC122360679
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 582333 ~ 585503 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU161495
aaaaaaagcgTTCTCACATGCGAGAGAGAAGTGCACATCGGACTGAAGGAGAACAAGTTGAGCACAAGAGTTGCACAAAGAAATAGTcgataaaactgttaaaagagATAAATCTCAGTTTATATCCACTTGTGAATGTGTGAGTACATGGTTTAATTCGACGATCACAAAAGAGTTGCCTTATTGCACGTGAGAGATCGCCAGTGGGGGAGGGGAAATTCGGACCACGTTAATGGAGATCCAGCAGGGGAGAGCAACGAAATGTGAGATCGAGTGTAAATGACCATGTGAGCTTTTGCTGTGTGCTTCAGGGAATCAGTCGGAgagGACACATATAGGCCACTGCTGTTGTTTTGTACGCCATTTATACGTTTTTGTAACCTTGTTTGCACCGGGGTAAAACTGAAGGGCCTGTGATTATTGGGTTTTGGTAACAGAGGCTGATCCTGTGAAACCTATTCAGGAAAGTTGAGTTAATACCACTGACGTTAATTAGGTGGTTGtctctgtaaatttatttatttttattttctttacattgTCTTAGATGGCCCTGAATTAAACCTTAATGCTTAAGGCTCAGTCAAGAATAAAAGAACC
>XR_006252827.1
GAGAAGTGCACATCGGACTGAAGGAGAACAAGTTGAGCACAAGAGTTGCACAAAGAAATAGTcgataaaactgttaaaagagATAAATCTCAGTTTATATCCACTTGTGAATGTGTGAGTACATGGTTTAATTCGACGATCACAAAAGAGTTGCCTTATTGCACGTGAGAGATCGCCAGTGGGGGAGGGGAAATTCGGACCACGTTAATGGAGATCCAGCAGGGGAGAGCAACGAAATGTGAGATCGAGTGTAAATGACCATGTGAGCTTTTGCTGTGTGCTTCAGGGAATCAGTCGGAgagGACACATATAGGCCACTGCTGTTGTTTTGTACGCCATTTATACGTTTTTGTAACCTTGTTTGCACCGGGGTAAAACTGAAGGGCCTGTGATTATTGGGTTTTGGTAACAGAGGCTGATCCTGTGAAACCTATTCAGGAAAGTTGAGTTAATACCACTGACGTTAATTAGGTGGTTGtctctgtaaatttatttatttttattttctttacattgTCTTAGATGGCCCTGAATTAAACCTTAATGCTTAAGGCTCAGTCAAGAATAAAAGAACCCTTATTTGTTAGATGTTCTGgcggtgtttgtgttttttttttttttatttagtacaaatACACTTGCCCGgccacatatatgtgtgtgtgtatgataataatttgtatttatcatttaatctCCTTCATTTTAAACTCTTCATAAGTTACTTCAACACTTCATGGAAAATATTGTGgcctttttaaagcaaaatataactTTCGGTTATATTAGACACCTGGACTAATTTAAAGCATGTAAAGCATTTAAATTGCACATTCTGGGAGACAACAACAACTGAATAGggagtaaataattttttatattcctatgaaatattatatatttaataacttgATGCTATTAAATTCATGGAATCTGTCTAAAAATAATGGCCCTGAGAACTACTGCCTGCACTAGGTTTGTCTTTTCATGATGACATCATGCCTTTTAAGAACAATGTGTGTGTTATTACCTTGGAGGACAGCTGGTGTAAGCAtctatttttagtgttttctctttggagtgtggCTACAGTGTTATACTTGCCATTCAGTCTGTAAATGGATCCAGTTGACTGAGCAGCTGCGGTTTCTGAGAAAGGGCTTTTAAGTTTTCACAAGTTCAAGTATCAGACTTTAGATCAGGATCGAATTAATTAAAGCTCCATAACTGTAAGTGCTTGCTAATGACCACAGCTTTACCaaccaaatatttaatattttagcatttaggAGTTAAGTGAAATTTTATGATCCCAATACAGTCACCATTAAGCTGCACTGATCAAAGTGATCCTTCTCAGTGAAAAGTATCTGTCGATTTATCCTTTCTCACAGTTGTGCATAGTATTGTGCAATGCAGTCTACTACATTGTTTTTCACCCACAATCATCTCAGACTGACTGAGTGGGTCAGGGGTGACATAAGCTGTAACATTAGCTGATATTAGCAGTAGCAGTAGGTATGGTGTACATTTTAGGACATCCCCAGACCAGCGTCATAAAATGAAAAGGTGTCATGGCTTTTTGCCCCTGGACAAAACAGCATTGTGGGTAGGCGTTACACAAAAAGTCATCAGGCGAAACTGACTCATGTGGCATTCGCTCATCCacttttgacttcttttttgGTAAAGTTGTGTGATGAAATCCTAGGTCATGGTTGTGGTTTTTTGGGCTTATTTTAGAAAACATGGTTGCTCAGTCTCAGTTACgcatgtaaccctcgttccttGATGGAGGGAATGGCGATTTTATGTTGTCATGACAGCCTgtggtcttgcttggagcccttattagctctgattaagagaaaacgccaatgaaatttggcaagtggttaactaatcctgagcaaCTCCCTGTCACACGAGTATAAATAGGCATCAGGTGTAACCACTTGTCATATTTTGCTGAGTTTATGGCCATCCCTTGTCCTGCCAGCGTTTAAGGTTGTGGTAAGGGGACATAACGTTTCTGTTCCCTCTATCAGGGGACAAGGGTTACATACGTGACTGAGACGTTCcttgtctgtcagtcactacgagTTATGTTGTGATGACAGACTGGAGTACAAATGGAAAATGCCACAACCTGAACCCCATCACAACCAATAGCACTACAAATGCTGACAGGCCATAGCATGTCAGGCAAGGTCGTAACATTCCCAATGCCCCAGAGCAAATTTGCGGACCTTGGCGCCCGCAGGGACCAATGTTTGACGAAACAAAGGGGTAAGCGAACCTTCTAGAGAAGGATGCTACAGAGCATCCTACCTGAAGGGAGGTGATATTTGGAGACACCCATGGACTGACTCAGACGGGGGAGTGCAACATGTGAAATAGGTGTCTGCCTCAGGTCCTGCCCAAGGATAGGGGGAAGGACTGACAGCTGAGACAGACAGAAGATCCGCCAAGGGAAGACATGAGTTCACCCTTAGGGGAATCTTACAGTGGAATACACATTTGGTATCACCCACAGGGAATCAGCCATATGGCAACCTAGCCCAGTGTAAGGGCTGACCGGGAGCCCGACACCAACACTGGGCCTGACATCAGACTGCTCTACCTagttatgctgatgatactcagctctatatttcagcgcagcctggtgatacacaccaaattgagaatctaacagaatgcatagtcgatgtAAATACCTGGAGGATGAGTAACTTCtaatggctctaaactggttcaggtcatatttagaggggaggggttattatgtgagtataggagagcataagtctaagtggacgtccatgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161495 False 600 lncRNA 0.41 3 584657 585503
XR_006252827.1 True 2830 lncRNA 0.41 4 582333 585478

Neighbor

gene id symbol gene type direction distance location
LOC122361256 NA coding downstream 287348 294867 ~ 294985 (-)
LOC122361163 NA coding downstream 303859 278356 ~ 278474 (-)
LOC122361151 NA coding downstream 304254 277961 ~ 278079 (-)
LOC122361280 NA coding downstream 306228 275987 ~ 276105 (-)
LOC122361170 NA coding downstream 307816 274399 ~ 274517 (-)
LOC122361052 foxo1b,LOC107686122,LOC107746988,LOC107588742,LOC107577289,LOC107691691 coding upstream 696808 1282311 ~ 1292313 (-)
LOC122359849 mbp,LOC107661001,LOC107551742,LOC107697274 coding upstream 911083 1496586 ~ 1510434 (-)
pmvk pmvk,LOC107551729,LOC107717898,LOC107735019,LOC107661023,LOC107714427,LOC107697277 coding upstream 959784 1545287 ~ 1549931 (-)
si:ch73-341k19.1 LOC107551746 coding upstream 1062864 1648367 ~ 1654527 (-)
nt5c3a LOC107714420,LOC107661006,LOC107551731,LOC107697280,LOC107720166,LOC107581689 coding upstream 1071045 1656548 ~ 1662627 (-)
G109248 NA non-coding downstream 131825 450294 ~ 450508 (-)
G109218 NA non-coding downstream 230289 342871 ~ 352044 (-)
LOC122361262 NA non-coding downstream 391820 190395 ~ 190513 (-)
LOC122361244 NA non-coding downstream 401591 180624 ~ 180742 (-)
LOC122361393 NA non-coding downstream 405920 176295 ~ 176413 (-)
G109273 NA non-coding upstream 22577 608080 ~ 608431 (-)
G109276 NA non-coding upstream 74465 659968 ~ 660352 (-)
G109283 NA non-coding upstream 224530 810033 ~ 810608 (-)
G109292 NA non-coding upstream 380235 965738 ~ 966074 (-)
G109308 zmp:0000001073,LOC107713869,LOC107692477,LOC107566287,LOC107564399 non-coding upstream 528240 1113743 ~ 1195829 (-)
G109275 NA other upstream 46962 632465 ~ 632897 (-)
G109287 NA other upstream 296956 882459 ~ 882752 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other upstream 1155617 1741120 ~ 1964161 (-)
G109600 NA other upstream 2528339 3113842 ~ 3129979 (-)
G109724 LOC107084717,LOC106511825 other upstream 3509254 4094757 ~ 4095504 (-)

Expression


Co-expression Network