G109316


Basic Information

Item Value
gene id G109316
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 1280870 ~ 1281255 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU161543
ATTGTTTGGATCTTTTTTCTATGTGAATAGAATtgattttgtcttatttaataatcagaaatgtcatttgttttgaCTCTAATTTCTTAGGAGATGAATTTGTCTCATGTGTTAGtgaagttttagtttttttttgctgattttaatATTGTCTGACGTGACTTAACTGAGATGGGAAATGTATTCCCACTGTAGCCAATTGTACATTAGAAACATACACTTATCGTACAGTCTTTGTCAGAAccacatgctttttttcttttttagactAGTTCATGGAGGAAGTGCctattaatattgtaatgtaaacaGCGATGaagaattgattttaatttaacaaaatgaaaaatgcagctGTTATATGAAGCCATAATTGTATATAAAGG

Function

GO:

id name namespace
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161543 True 386 lncRNA 0.29 1 1280870 1281255

Neighbor

gene id symbol gene type direction distance location
LOC122361256 NA coding downstream 985885 294867 ~ 294985 (-)
LOC122361163 NA coding downstream 1002396 278356 ~ 278474 (-)
LOC122361151 NA coding downstream 1002791 277961 ~ 278079 (-)
LOC122361280 NA coding downstream 1004765 275987 ~ 276105 (-)
LOC122361170 NA coding downstream 1006353 274399 ~ 274517 (-)
LOC122361052 foxo1b,LOC107686122,LOC107746988,LOC107588742,LOC107577289,LOC107691691 coding upstream 1056 1282311 ~ 1292313 (-)
LOC122359849 mbp,LOC107661001,LOC107551742,LOC107697274 coding upstream 215331 1496586 ~ 1510434 (-)
pmvk pmvk,LOC107551729,LOC107717898,LOC107735019,LOC107661023,LOC107714427,LOC107697277 coding upstream 264032 1545287 ~ 1549931 (-)
si:ch73-341k19.1 LOC107551746 coding upstream 367112 1648367 ~ 1654527 (-)
nt5c3a LOC107714420,LOC107661006,LOC107551731,LOC107697280,LOC107720166,LOC107581689 coding upstream 375293 1656548 ~ 1662627 (-)
G109308 zmp:0000001073,LOC107713869,LOC107692477,LOC107566287,LOC107564399 non-coding downstream 85041 1113743 ~ 1195829 (-)
G109292 NA non-coding downstream 314796 965738 ~ 966074 (-)
G109283 NA non-coding downstream 470262 810033 ~ 810608 (-)
G109276 NA non-coding downstream 620518 659968 ~ 660352 (-)
G109273 NA non-coding downstream 672439 608080 ~ 608431 (-)
G109320 NA non-coding upstream 44365 1325620 ~ 1325934 (-)
G109430 NA non-coding upstream 240028 1521283 ~ 1521485 (-)
G109425 LOC107714432,LOC107661002,LOC107551745,LOC107717891,LOC107697276,LOC107581694 non-coding upstream 246838 1528093 ~ 1542296 (-)
G109439 NA non-coding upstream 355161 1636416 ~ 1636997 (-)
G109440 NA non-coding upstream 359522 1640777 ~ 1641312 (-)
G109287 NA other downstream 398118 882459 ~ 882752 (-)
G109275 NA other downstream 647973 632465 ~ 632897 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other upstream 459865 1741120 ~ 1964161 (-)
G109600 NA other upstream 1832587 3113842 ~ 3129979 (-)
G109724 LOC107084717,LOC106511825 other upstream 2813502 4094757 ~ 4095504 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other upstream 3950956 5232211 ~ 5245558 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 4501412 5782667 ~ 5790534 (-)

Expression


Co-expression Network