G109600



Basic Information


Item Value
gene id G109600
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 3113842 ~ 3129979 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU161934
taaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacAGTCCAGGCGACGGACTGCACcggatacggctgacgggccaaGATGCCGAAGCCGTTAAAtcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcccgtcacagtggtggagaatgcgggcaaggcggagcttagacggcacagttgggcgacatctgatgacgtcatcccctctcgctggtacccatgccgggacggaggaacaacggagactcgctcccagccaccaggaagggtaagtgacgcttgcgtttactgtcatttacccggtggctggttgagcatgtcgactaattcccggtttctctgtcccggtgcgagaggggagttgcccggagaggaatccctgccccgcccactccgaccgctggagcctggttgaggaaggtagcactcctgcgtggcggcgaccgcctgacggggttgacgctgggggaggggaatgtgacgagtcggctgcccctcctctttattgtcatcatcaccccgtcctt
>TU161940
ccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgccccgaacaggagagggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcccgtcacagtggtggagaatgcgggcaaggcggagcttagacggcacagttgggcgacatctgatgacgtcatcccctctcgctggtacccatgccgggacggaggaacaacggagactcgctcccagccaccaggaagggtaagtgacgcttgcgtttactgtcatttacccggtggctggttgagcatgtcgactaattcccggtttctctgtcccggtgcgagaggggagttgcccggagaggaatccctgccccgcccactccgaccgctggagcctggttgaggaaggtagcactcctgcGATGTTGGAG

Function


GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA


RNA id representative length rna type GC content exon number start site end site
TU161934 True 981 TUCP 0.61 2 3128061 3129979
TU161940 False 772 lncRNA 0.61 2 3113842 3128916

Neighbor


gene id symbol gene type direction distance location
ascc3 ascc3 coding downstream 49264 2915655 ~ 3064578 (-)
sim1a sim1a,sim1,LOC107697271,LOC107661021,LOC107551726 coding downstream 198411 2899313 ~ 2915431 (-)
LOC122360106 NA coding downstream 412893 2700321 ~ 2700949 (-)
LOC122360634 prdm1,prdm1a,LOC107661008,LOC107551748,LOC107697283,LOC107581686 coding downstream 1103176 2000781 ~ 2010666 (-)
med18 med18,LOC107714426,LOC107661027,LOC107697268,LOC107720175 coding downstream 1393727 1718035 ~ 1720115 (-)
hace1 hace1,LOC107679309,LOC107661011,LOC107598938 coding upstream 554139 3684118 ~ 3699070 (-)
csf3r NA coding upstream 599163 3729142 ~ 3743612 (-)
LOC122360352 zgc:91890,LOC107559041,LOC107689180,LOC107688990,LOC107713919,LOC107726234 coding upstream 1029508 4159487 ~ 4160521 (-)
LOC122360353 LOC107713904,LOC107689171,LOC107559021,LOC107688989 coding upstream 1073702 4203681 ~ 4243342 (-)
LOC122360932 grik3,LOC100334689,LOC105019312,LOC106605119,LOC102778608 coding upstream 1381995 4511974 ~ 4614017 (-)
G109544 NA non-coding downstream 271561 2842052 ~ 2842281 (-)
G109538 NA non-coding downstream 285219 2825428 ~ 2828623 (-)
G109531 NA non-coding downstream 305088 2808376 ~ 2808754 (-)
G109522 NA non-coding downstream 433504 2677203 ~ 2680338 (-)
G109509 NA non-coding downstream 583843 2528804 ~ 2529999 (-)
G109607 LOC107667969,LOC107661009,LOC107714403 non-coding upstream 213951 3343930 ~ 3418605 (-)
G109614 NA non-coding upstream 494663 3624642 ~ 3625012 (-)
G109615 NA non-coding upstream 498829 3628808 ~ 3629417 (-)
G109638 NA non-coding upstream 579288 3709267 ~ 3717083 (-)
G109650 NA non-coding upstream 761159 3891138 ~ 3891823 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other downstream 1149681 1741120 ~ 1964161 (-)
G109287 NA other downstream 2231090 882459 ~ 882752 (-)
G109275 NA other downstream 2480945 632465 ~ 632897 (-)
G109724 LOC107084717,LOC106511825 other upstream 964778 4094757 ~ 4095504 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other upstream 2102232 5232211 ~ 5245558 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 2652688 5782667 ~ 5790534 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other upstream 2687061 5817040 ~ 5818618 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other upstream 2772598 5902577 ~ 6184133 (-)

Expression



Co-expression Network