G8758



Basic Information


Item Value
gene id G8758
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 13414805 ~ 13415251 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU9656
CGTCACTCGTATAGTTTTGAATGGGATAAAGTGCGAAATATGTTGGAATAAGTCCCGCCTTCTAAATAAGAGCCAATCACCGATTGGTAAAGTCATCGTGTCACTGCAGCGGCCGTTAGAAGCTCCGGTTCCTATAGAAAGGGTCAGATGCGCGCCTCCGAAATGAGACACAAGAGACGCGCATTTAGGACTGCGCATGCGCATTAGCATGATCCAGCCTGAAAAATACCATTTTTTGTCATGATTCAAGCGTTTAGAAACAAAATTTATGAGACAGTTGTTGTCAGATTTCATTGGTGATTTCATTTATGAAATTTAATCGAAAGCTTGGCAAACAGCTTTGGAGAATTTGATGTTTCCCCATTCAAAGAGATAGGAGCTGCACTTGCATGCCCAAGAGGCATTTCAAAGATGGCCGCCAAGTGAAATGACTTGTCTTAAAGGGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU9656 True 447 lncRNA 0.43 1 13414805 13415251

Neighbor


gene id symbol gene type direction distance location
CI01000000_13360123_13365788 TMEM144 coding downstream 49017 13360123 ~ 13365788 (-)
CI01000000_13350939_13358816 FAM198B coding downstream 55989 13349956 ~ 13358816 (-)
CI01000000_13152692_13175605 PDGFC coding downstream 239200 13151625 ~ 13175605 (-)
CI01000000_13117207_13118382 MRPL18 coding downstream 296423 13115994 ~ 13118382 (-)
CI01000000_13087976_13097052 SRPX2 coding downstream 315604 13087588 ~ 13099201 (-)
CI01000000_13587788_13588280 NA coding upstream 172152 13587403 ~ 13588280 (-)
CI01000000_13599770_13622506 NA coding upstream 184519 13599380 ~ 13622506 (-)
CI01000000_13625996_13633130 LRIT3, LRIT3A coding upstream 210462 13625713 ~ 13633130 (-)
CI01000000_13641099_13651719 GPM6AA, DMB, GPM6A, GPM6AB coding upstream 225421 13640672 ~ 13651719 (-)
CI01000000_13672975_13675416 SPATA4 coding upstream 257631 13672882 ~ 13675416 (-)
G8737 NA non-coding downstream 34962 13379643 ~ 13379843 (-)
G8735 NA non-coding downstream 35912 13378572 ~ 13378893 (-)
G8731 NA non-coding downstream 39786 13368899 ~ 13375019 (-)
G8689 NA non-coding downstream 80921 13250463 ~ 13333884 (-)
G8982 NA non-coding upstream 139054 13554305 ~ 13558240 (-)
G8997 NA non-coding upstream 181917 13597168 ~ 13597598 (-)
G9022 NA non-coding upstream 288428 13703679 ~ 13703942 (-)
G9024 NA non-coding upstream 297275 13712526 ~ 13712776 (-)
G8699 NA other downstream 103376 13272585 ~ 13311429 (-)
G8125 NA other downstream 2373896 11040269 ~ 11040909 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other downstream 2587210 10824324 ~ 10825464 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other downstream 3000292 10407395 ~ 10409950 (-)
G3931 NA other downstream 7011280 6157013 ~ 6403525 (-)
G9036 NA other upstream 311549 13726800 ~ 13727090 (-)
G9602 NA other upstream 925751 14341002 ~ 14346534 (-)
CI01000000_14200000_14436182 TENM2 other upstream 970106 14200000 ~ 14436253 (-)
G10672 NA other upstream 2811036 16226287 ~ 16231126 (-)
CI01000000_16354158_16360016 NA other upstream 2947257 16353959 ~ 16360213 (-)

Expression



Co-expression Network