G109724 (LOC107084717,LOC106511825)


Basic Information

Item Value
gene id G109724
gene name LOC107084717,LOC106511825
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 4094757 ~ 4095504 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU162095
GCAAGTGTTGCCTTCCAACCACCTGCTACCACCTCACAACAGCCAAGCACCTATGAAAACGAGTATGTTCATAACTCATGCGAAGCTGGATTTGAGAATAACAATTCAACACCCTTGCAACGTTTTAGGCAAAATAGCAATGGTTATCCGACTCCTCAGCCCTACCCTATTTCCCCAAATTCAAACAACTGCAGCTCAAACATGAATGACTTTGTAAGATTTCTTGCTCGTCGTGAGCTAGTGGCAACAGGTTTACTGCAGTTTAATGACAAACCTCAGAATTACAGAGCCTGGAAACGTTCTTTTCAGTCTGCAACTGCTGATTTAAACCTGACTTCTAGTGAAGAGATGGATCTCCTTCTAAAGTGGCTTGGCAAGGAGTCTGCAGAGCATGTTGAGCAGATAAGGGCAATACACATCAACCATCCACAAGCAGGACTGGCTATGGCATGGGACAGACTGGATCAAGCGTATGGCTCTACGGAAGTAATAGAAGATGCCCTATTCAAACGTATTGATGCCTTTCCTAAAATAACCAACAGAGATTATTCTAAACTGACAAAATTGAGTGATCTGTTAATGGAGCTTCAGTCAGCTAAGGCAGAAGGAGACTTGCCAGGTCTTGCTTTCTTAGACACTGCAAGAGGTGTCAATCCGATAGTACAGAAGCTACCGTTTCGTTTGCAAGAGAGATGGGCATCAGTCGGCGCAGCCTACAAGCGTCAAAATCGTGTTCCTTATCCCCCCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107084717 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162095 True 748 TUCP 0.45 1 4094757 4095504

Neighbor

gene id symbol gene type direction distance location
csf3r NA coding downstream 351145 3729142 ~ 3743612 (-)
hace1 hace1,LOC107679309,LOC107661011,LOC107598938 coding downstream 395687 3684118 ~ 3699070 (-)
ascc3 ascc3 coding downstream 1030179 2915655 ~ 3064578 (-)
sim1a sim1a,sim1,LOC107697271,LOC107661021,LOC107551726 coding downstream 1179326 2899313 ~ 2915431 (-)
LOC122360106 NA coding downstream 1393808 2700321 ~ 2700949 (-)
LOC122360352 zgc:91890,LOC107559041,LOC107689180,LOC107688990,LOC107713919,LOC107726234 coding upstream 63983 4159487 ~ 4160521 (-)
LOC122360353 LOC107713904,LOC107689171,LOC107559021,LOC107688989 coding upstream 108177 4203681 ~ 4243342 (-)
LOC122360932 grik3,LOC100334689,LOC105019312,LOC106605119,LOC102778608 coding upstream 416470 4511974 ~ 4614017 (-)
LOC122360926 LOC107598923,LOC107756920,LOC107732735,LOC107660307,LOC107565651 coding upstream 700306 4795810 ~ 4799825 (-)
smpdl3b smpdl3b,LOC107744599,LOC107703919,LOC107732739,LOC107688972 coding upstream 793979 4889483 ~ 4894107 (-)
G109716 NA non-coding downstream 153118 3940957 ~ 3941639 (-)
G109650 NA non-coding downstream 202934 3891138 ~ 3891823 (-)
G109638 NA non-coding downstream 377674 3709267 ~ 3717083 (-)
G109615 NA non-coding downstream 465340 3628808 ~ 3629417 (-)
G109614 NA non-coding downstream 469745 3624642 ~ 3625012 (-)
G109729 si:dkey-283b15.4,LOC108410633,LOC107558621,LOC107559044,LOC107726254,LOC107688991,LOC108268159 non-coding upstream 58213 4153717 ~ 4155712 (-)
LOC122360497 NA non-coding upstream 84903 4180407 ~ 4181293 (-)
G109743 NA non-coding upstream 291897 4387401 ~ 4387701 (-)
G109760 NA non-coding upstream 717815 4813319 ~ 4814496 (-)
G109819 NA non-coding upstream 723303 4818807 ~ 4819736 (-)
G109600 NA other downstream 964778 3113842 ~ 3129979 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other downstream 2130596 1741120 ~ 1964161 (-)
G109287 NA other downstream 3212005 882459 ~ 882752 (-)
G109275 NA other downstream 3461860 632465 ~ 632897 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other upstream 1136707 5232211 ~ 5245558 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 1687163 5782667 ~ 5790534 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other upstream 1721536 5817040 ~ 5818618 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other upstream 1807073 5902577 ~ 6184133 (-)
G110208 adamts16,LOC107757336,LOC107558631,LOC107689003,LOC107726256,LOC107657842,LOC568792 other upstream 1933704 6029208 ~ 6034777 (-)

Expression


Co-expression Network