ndufa3 (ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249)



Basic Information


Item Value
gene id ndufa3
gene name ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5817040 ~ 5818618 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU162692
CAAGACAGGACTACAGAAGCAAACATGGCGGCCATCGGCAGGTTTTTGAAGAACGCTTGGAACAAAGAGCCCGTGATCACAGTTTCCTGTGGAATCGCATTTTTGGCTTTGCTTCTGCCGGCTTTGAGCCTGTTAACAAAGTACTCCGTCATGATGAACAGCGTTGTTCCATACAGTTATCCAGTTCCGGTTCGAGACGATGGAAACATGCCAGACGTTCCAGCGCATCCCTCAGACCCTCAAGGAAAAAACATCGACTGGCTGAAAAACCTGTGAAAGCCCTTCAGAGTCATGTACAGTCACACTCACCTTTACCTCTGTCTC
>XM_043261652.1
ATGATTCAGTTTATTATAAATCTCGCAGGTAGGTTTTCTACTCCTCGTCAGTCGCGTTTTAAACACGTCACTGACCGTTCAGCCAATCCACAGCAAGTGCGTCACCAACGCGTCGATTTGTTATCGAACTACAATTCCCACGATACCCAAGACAGGACTACAGAAGCAAACATGGCGGCCATCGGCAGGTTTTTGAAGAACGCTTGGAACAAAGAGCCCGTGATCACAGTTTCCTGTGGAATCGCATTTTTGGCTTTGCTTCTGCCGGCTTTGAGCCTGTTAACAAAGTACTCCGTCATGATGAACAGCGTTGTTCCATACAGTTATCCAGTTCCGGTTCGAGACGATGGAAACATGCCAGACGTTCCAGCGCATCCCTCAGACCCTCAAGGAAAAAACATCGACTGGCTGAAAAACCTGTGAAAGCCCTTCAGAGTCATGTACAGTCACACTCACCTTTACCTCTGTCTCAGTAAAATCTCTTCATTTAATTAA

Function


symbol description
ndufa3 Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFA3 (NADH:ubiquinone oxidoreductase subunit A3).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3

GO:

id name namespace
GO:0005747 mitochondrial respiratory chain complex I cellular_component

KEGG:

id description
K03947 NDUFA3; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 3

RNA


RNA id representative length rna type GC content exon number start site end site
TU162692 False 324 TUCP 0.49 4 5817064 5818362
XM_043261652.1 True 495 mRNA 0.46 5 5817040 5818618
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Neighbor


gene id symbol gene type direction distance location
dctn3 dctn3,LOC107713912,LOC107559051,LOC107689179,LOC107726235,LOC107689028,LOC107569444 coding downstream 243240 5571501 ~ 5573800 (-)
ttk ttk,LOC107713924,LOC107726228 coding downstream 246258 5560481 ~ 5570782 (-)
bckdhb bckdhb,LOC107688983,LOC107689156,LOC107559046,LOC107569448 coding downstream 257144 5508617 ~ 5559896 (-)
tpbgb LOC107688980,LOC107725281,LOC107713928,LOC107713927,LOC107689178,LOC107559023 coding downstream 396400 5418473 ~ 5420640 (-)
rpa2 rpa2,LOC107713930 coding downstream 437078 5367332 ~ 5379962 (-)
mrpl51 mrpl51,LOC107726236,LOC107713917,LOC107559052 coding upstream 2373 5820991 ~ 5822850 (-)
arnt arnt,LOC107688995,LOC107689175,LOC107559034 coding upstream 15539 5834157 ~ 5850214 (-)
cers2b cers2b,LOC107688996,LOC107726244,LOC107689165,LOC107558627 coding upstream 34858 5853476 ~ 5873058 (-)
celf3b LOC107559029,LOC107713913,LOC107689166 coding upstream 58430 5877048 ~ 5900217 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding upstream 430301 6248919 ~ 6261997 (-)
G110102 NA non-coding downstream 167 5815560 ~ 5816873 (-)
G110100 LOC107713901,LOC107689161,LOC107559047,LOC107689017 non-coding downstream 3356 5809971 ~ 5813684 (-)
G110093 NA non-coding downstream 8691 5778754 ~ 5808349 (-)
G110090 NA non-coding downstream 39999 5774847 ~ 5777041 (-)
LOC122360242 elovl4a,LOC107726252,LOC107689158,LOC107689169,LOC107713923,LOC107688984,LOC107559048 non-coding downstream 235308 5575640 ~ 5581732 (-)
G110106 NA non-coding upstream 33814 5852432 ~ 5852762 (-)
G110206 NA non-coding upstream 179003 5997621 ~ 5999361 (-)
G110221 NA non-coding upstream 300167 6118785 ~ 6119767 (-)
G110224 NA non-coding upstream 318489 6137107 ~ 6207805 (-)
G110227 NA non-coding upstream 320776 6139394 ~ 6208668 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other downstream 26506 5782667 ~ 5790534 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other downstream 571482 5232211 ~ 5245558 (-)
G109724 LOC107084717,LOC106511825 other downstream 1721536 4094757 ~ 4095504 (-)
G109600 NA other downstream 2687061 3113842 ~ 3129979 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other downstream 3852879 1741120 ~ 1964161 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other upstream 83959 5902577 ~ 6184133 (-)
G110208 adamts16,LOC107757336,LOC107558631,LOC107689003,LOC107726256,LOC107657842,LOC568792 other upstream 210590 6029208 ~ 6034777 (-)
G110215 NA other upstream 278057 6096675 ~ 6099927 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other upstream 461091 6279709 ~ 6339496 (-)
G110303 NA other upstream 1263344 7081962 ~ 7083524 (-)

Expression


ndufa3(ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249) Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 600.
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ndufa3(ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249) Expression in each Bioproject

Bar chart with 2 bars.
ndufa3(ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12500.
End of interactive chart.

Co-expression Network