LOC122359839 (LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911)


Basic Information

Item Value
gene id LOC122359839
gene name LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5902577 ~ 6184133 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU162864
GCTCCGCGGATCtggtgtttgtttctgtttctctcacgAGCCTGACGCAGAAGAACGCACCGCGAGCGGAGGATGACGCGCGCGTCTCTGAGCAGATTGTGTGCGTTTTGGTGTTGTGCGTCTGCCGTCCTGTCCCTAACAACAGCTGAGGAAGCAGAGAAGCCGGCGGCCGGACGCAAGTCTCGTCAGACAGAAGAGGAGCCTCCTGAAGGAGTTTGGGGTCCATGGAGCGAGTGGGTGGAGTGTTCTCAGAGCTGCGGAGTGGGCGTGTCTGAGAGGCGGAGACATTGTATGCCGCCTCCCCAAACTCCGCCCTTCACGTGGAACCGACCGGTTTACCTTCCACCGGGTGTCCCGAACAACACCCCCGTGATCTCTGCGGTCAGACCGTACTACAACTCCTTGTATCCCGTCAACGAACCCCCTCCTTACGGAGCAGAAGGCGCAGAGAGGCCTCCTTATTTTTCCCCGCCTCTCCCAGCCAATCCCAATCCTGGAT
>TU162868
ATTGACACTATTGTACTTCTAAATTTCTCCAGAAAACCCCATCTCTCTCGGACGGCCAGAGGTTGAAGACATTTTCAgatcattttcatgtttgggtaTTTAGATATTATTGTAAACCACAGAGCagttttgttgtgcattttgtGTTGTGTAATATAAGGCCGAAAGGGTTGCTGTGGATATGCTGTATGCACAGGTGGGATGCATTCAGGGCAGCATTATGTGTGTGTCGGTGTTAAATAAAGCAGTGTAGTGATTTCAGCCAAAGTCAGGTACAGTGCAAGACCGTTGCCCTGGATCAAACCGAGGTTAAAATACTCTCTGGTGTTAGAACATGTGAGCTTTCTGTTACTAGTCCACAGCTATAACCACTAGGCGATCACAATCTCTTATGCAATGAGCAATATGTGACCAATTGAGTATATAAATGAGTAATAACAAAGATGGGATGGATCTTTTGTCACAGTAACTTGACtccaggcaaaaaaaaatactgcgtTTTAGTATATACAgtcagatttgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgcgtgcgtgtgtgtgtgcgtgcgtgtgtgcgtgtgtgtgcgtgcaaagtgtgcgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgcgcgtgtgcgtatgtgtgtgtgtgcgcatgtgtgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgcgtgtgtgtgtttcacgtCTGAGagtttatgtatattatgtatatcaCCTATGTTTAGACAGGTAGCAGATACTCTTTAGAAGACTAAAAAgatgcttttatatataaaacaggaAACATAGCTATTTATCTACGATAagatacatataatttattttttcttatatggATCAGTTACTGTCTTTGAGAAATTCGAGATCTACTTGTTGCCATACATATATGTTGCTTTGTTATGGAACAAACAGTGTGTGCAGATTTTACAACagttattattcataataaacaaACGTTAAAACCACA
>TU162871
TGTcctgttttcatcagctgtttggactctcattctgacggcacccattcactccagagtATTCATTGACACTATTGTACTTCTAAATTTCTCCAGAAAACCCCATCTCTCTCGGACGGCCAGAGGTTGAAGACATTTTCAgatcattttcatgtttgggtaTTTAGATATTATTGTAAACCACAGAGCagttttgttgtgcattttgtGTTGTGTAATATAAGGCCGAAAGGGTTGCTGTGGATATGCTGTATGCACAGGTGGGATGCATTCAGGGCAGCATTATGTGTGTGTCGGTGTTAAATAAAGCAGTGTAGTGATTTCAGCCAAAGTCAGGTACAGTGCAAGACCGTTGCCCTGGATCAAACCGAGGTTAAAATACTCTCTGGTGTTAGAACATGTGAGCTTTCTGTTACTAGTCCACAGCTATAACCACTAGGCGATCACAATCTCTTATGCAATGAGCAATATGTGACCAATTGAGTATATAAATGAGTAATAACAAAGATGGGATGGATCTTTTGTCACAGTAACTTGACtccaggcaaaaaaaaatactgcgtTTTAGTATATACAgtcagatttgtgtgtgtgtgtgcgtgtgtgtgtgtgtgcgtgtgtgtgtttcacgtCTGAGagtttatgtatattatgtatatcaCCTATGTTTAGACAGGTAGCAGATACTCTTTAGAAGACTAAAAAgatgcttttatatataaaacaggaAACATAGCTATTTATCTACGATAagatacatataatttatttttttcttatatggATCAGTTACTGTCTTTGAGAAATTCGAGATCTACTTGTTGCCATACATATATGTTGCTTTGTTATGGAACAAACAGTGTGTGCAGATTTTACAACagttattattcataataaacaaACGTTAAAACCACA
>XM_043260030.1
TGCTCCTGGGCTCCGCGGATCtggtgtttgtttctgtttctctcacgAGCCTGACGCAGAAGAACGCACCGCGAGCGGAGGATGACGCGCGCGTCTCTGAGCAGATTGTGTGCGTTTTGGTGTTGTGCGTCTGCCGTCCTGTCCCTAACAACAGCTGAGGAAGCAGAGAAGCCGGCGGCCGGACGCAAGTCTCGTCAGACAGAAGAGGAGCCTCCTGAAGGAGTTTGGGGTCCATGGAGCGAGTGGGTGGAGTGTTCTCAGAGCTGCGGAGTGGGCGTGTCTGAGAGGCGGAGACATTGTATGCCGCCTCCCCAAACTCCGCCCTTCACGTGGAACCGACCGGTTTACCTTCCACCGGGTGTCCCGAACAACACCCCCGTGATCTCTGCGGTCAGACCGTACTACAACTCCTTGTATCCCGTCAACGAACCCCCTCCTTACGGAGCAGAAGGCGCAGAGAGGCCTCCTTATTTTTCCCCGCCTCTCCCAGCCAATCCCAATCCTGGATTACCTCTCTGCGAAACGAAGCGGTGGCGCCGGGCCAGTGCAGTTCGGCCCGCCCAATCAGGAGCGGTTTCAGTGTACCGCGCACCTTCCTCATCCGCTTCACTTCCCTTTGGAAGAGGTCCTGCACGGTCGCCCAATCACGACAGAGCGGTAAACACTGGAAGCAGGAGATCAGTTTCCTCCAATAGAGATCCAGCATCTATAAGAAGGTCTAGTTCTTCAATTCGTCCGGGACAGTTTGGGTATGGCATGCCGTTCTCTCTTCCCTTACACAGACAAAACCGCCACCTTCGACACACACGGCGCCACAACACCACCGCCGCCACAGACGGCCTCGACGCTCTCAGCGTGAACTCCAGCTCTCCTGTGGATGAAACACcaggagaagaagaacaaaTGACCACAGACACTGTTAACAGAGAACCAAAGGAGAAGGAAAAGGAGACGGAGGCACGCATCCCACATTCACGGCCCCTGACCCAGAGACACGGGGCCCGGGACAGACGCCTCGACGGACGAGCTTCTCGCCAAGTCCCACACTCCTACGCACACACCATCCAGAGATCGCACACCCCAGAGAGCCTCCTCCCCGGCCTCCAGACGCCCGCCAACCCCAACCCCGAGCCCTGGGTCCTGCAGCCCTCCAGAAACCAAGCAGAGAGGGACTGGAGGCATCCAGCGGCCGCACACAACTACAGATGCTCTGGACAGGACAGAGAGTACATGAGGTGCAGCCTACAGgCATGTCCAGGTGCTCCGGTGAACTCCAGAGCTGAGCAGTGTGCAGCGTTCAACAATCAAGAGTTTATGGGACGCGTGTATGACTGGGAGCCTTTCACAGAAGTGGGTCCGGAGCAGCAGTGTGAGCTGACCTGTCGGCCGGTCGGGTACCGCTTCTACGTGCGGCAGGCGGAGAGGGTACGAGACGGAACGCCCTGCGCCAATAACACACCCCACGACGTGTGTGTGGGAGGACGCTGTCTGagcgAGGGCTGTGACGGTGTGCTGGGATCAGGGTTGGTTCGGGATCGCTGTGGCGTGTGCGGTGGTGGAGATGGTACCTGCGAGAGGGTCACAGGAACCTTCCTGAACACCAGCGTCCCTCTGGGCTACCACAAAATCCTGGACATCCCGCCTGGAGCCACGGCCATCAACGTCACCGAGAGACGAGCCAGTCCCAACTATCTGGCCCTGCGCAGTGGAACCGGTCAGTCTGTGGTGAACGGACGCTGGGCGGTCGATCCTCCGGGAGAGTATCAGGCGGGAGGAACCACCTTCCTGTACAGCCGACCCAAAGCTGGGCCTCGAGAGCAGGgagaagaaagaggagagaCCCTCACCGCTCCTGGACCCACGACAGCCCAGCTGCAGCTATAcATTATTTTCCACAGGCAGAATCCAGGCATAGACTATGAATATTACATCCCAGTGGAGAAACGGCGGGACGGAGAGAGAGAagtacacagagagagagagagaggacgctCGGCACTCAGAGAAATCAGTGGCGTCTCCGTGGCGGTGGAGAACCCTGTCGCTCCTCCTCCTGTGTCGTCTTCCGCCTCCTCACCTCCGTTTTCGTTCCCTTCCTCCTCATCGTCTTCCTCTGCATCTGATCGATGGCCACAAGAGAGGCCCCGCCCACAAGGCCTAGGACCCAATCGTAACGCTCGAATCCCTCCGAGAACGGACCTCCCATTGGACAATCAGCCCGTGTTCGTGTGGCGACGAGGAGCTCTGACAGAATGCACCGCTAGCTGTGGAAAAGgcacTCAGTACAGAGAGATCGTGTGTGTGAATCGACACACAGAACAGGAAGTCCATGAAAGGAGATGTGACTCTGCAACCAGACCTGCGCCGGAGGAGGAACCCTGTAACATCCAGCCCTGTCCACCCTTctgggACGTGGGCTCGTGGTCCGAGTGCAGTGTGTCTTGCGGCTGGGGAGCGCAGCAGCGTCACATCCAGTGCAGACTGAGTTTTGGGAATCGTTCGACCATGGTTCACCCCCAGCACTGCTCCAGTCTCAGCCGTCCCAACGCCACCCAGCCCTGCCACCCTCGCATCTGCTCACACTGGGAGATCAGCACCAACTGGAGCATGTGTTCAGTGGATTGTGGATTGGGAAAGAGAACCCGGAGCGTACGCTGTGTCAGTGACCGTGGCAACACTGTGAGTGACAGGGAGTGCAGTGACAGGCTCCGCCCACAGCGCTCCGAGGACTGTCACATGGGTCCCTGCGTCACTAACTGGTACTTCACCGACTGGACGAACACTTGCTCTGCGGCGTGTGGACCGGGCGTCCAGCGGAGGGAGGTGGTGTGTTTGACCGGCGGAGGCAGGAGAGAAGGAGACGAGGGAGGGGAGTGTGTCGCCGAGAAACCGGCTGACATGAAGGCCTGTAACGGGGGTCCCTGTACAGCCGTCCACCTCTGGTACACCGGACCCTGGGGACAGTGTAACGCGGCGTGCGGAAACGGCACCCAGCGCAGGGACGTCATCTGCGTGAAGAAGACAGGAAGTGAGTTCGTCGTGAGCGGCGCCAGCGAGTGCTCCCACCTGGAGAAACCGTCTCCGGTGCAGCCGTGTGAACTCCAGCCCTGCGCGCCGCAGTGGTTCAGCACCGAGTGGAGCGCGTGCTCTCGGTCCTGCGGTGAAGGGGTGCAGACGCGGGAGGTGCGGTGTCTCACGGCAGACAAGCAGCACGGCGCCGCCTGTGACGGGGACTCCAGACCGGCCCAGGAGCGCTCCTGCAACACCATCCCCTGCAGTCCCTtcgaagATGAGAACTGTAAGGACAGACGACACAACTGTGTGATGGTGGTCCAGGCTCGACTCTGTGTCTACTCCTACTACAAGACCGCCTGCTGCGCGTCCTGCACCCAGAGCGCTCAGCGGGCCAAAAGACATTAACCCTCGAGACGCCAGGTTCGGAGATCCAACCGCCGGAGCCCAAACTCAGCCAATCACACTTCTAGCAGAGGAAGCCAAGCAGCCAATCGGAGGCCGTTCAGGTTCGAAAGGAGAGAATTCCAGCTTGAACCGAGCTGAGATCCCTTTAAAGAGAAAGTTTTAAAACGTTCGTAGGCTCAAATGACCGACGGTAGCTCTTTCCCCGTTCGTGACGAGTGTTTAGTACACTATACTGTCAAATACTAAACCATTCCTTGAGACATCTTTAAACAAATGCGCTGCGGCCGCAGGTCCACGTTCTGGACGCGTGTGTGAAGATATTGCTAAATGGGAACACTTCTAGAAGTTGCCTTTGTGCTTTTGCCACGCATTAAGTGTTTCGTCATGGTTTACTTTAAACCAAAAGAATCGAATAATCTTCAGTTAGTTTGTTTTACACACCTAATGCGCATCGTTCAATCCTAATTATGTTGAAttagcgcaaaaaaaaaaactagcattGTTGTCAGCgagtaaaaaacaaaagattttccAATTCAAATCATGAAGATGCATCGTAATTGCATACTTCGATGCGAGCagctatacatttttatgcaaacatTGATTTTCTTCTTACAAACAGTGCCTTTTGGCCTCGTCTCAGTCCTCTAAACGGTCCTTAAGATATCAGTGCTTCGCAAGGACCTACATATTCCAGCATAAGTGCTCGTGACTGTCTAAAAATAGCACACTGACAGTCAGAAATCTAGAAATCTACTATGAGTCTAGTTCATCATTAAGATGAGCATCAAGATCAGCTCTCTTTATTTAATGATTCAGTCTTTATTTCCTTAGGTCGGATTCGTCTCAATGtaaatcagtcttttttttgtttcttgtttttgtcatttttgcgtgatatgttttttgtttgtgtttttgctctttattgttatttctggcTGTTTTTATTGGTTCCCACGTTGTAAATGAAAGCAATAgctcacctaaaaattaaatgtgctcaccctcaggccgtCCGAGATGAGGATGAGTtcatttcttcatcagatttgtaGAAATGCGTCTCCGcggtggatgggtgccgtcagaatgagagtccaaaaagaTCCACGATACTACACAGCATTCACTGGAGTGTTGTGGATCGTTGTcctgttttcatcagctgtttggactctcattctgacggcacccattcactccagagtATTCATTGACACTATTGTACTTCTAAATTTCTCCAGAAAACCCCATCTCTCTCGGACGGCCAGAGGTTGAAGACATTTTCAgatcattttcatgtttgggtaTTTAGATATTATTGTAAACCACAGAGCagttttgttgtgcattttgtGTTGTGTAATATAAGGCCGAAAGGGTTGCTGTGGATATGCTGTATGCACAGGTGGGATGCATTCAGGGCAGCATTATGTGTGTGTCGGTGTTAAATAAAGCAGTGTAGTGATTTCAGCCAAAGTCAGGTACAGTGCAAGACCGTTGCCCTGGATCAAACCGAGGTTAAAATACTCTCTGGTGTTAGAACATGTGAGCTTTCTGTTACTAGTCCACAGCTATAACCACTAGGCGATCACAATCTCTTATGCAATGAGCAATATGTGACCAATTGAGTATATAAATGAGTAATAACAAAGATGGGATGGATCTTTTGTCACAGTAACTTGACtccaggcaaaaaaaaatactgcgtTTTAGTATATACAGtcagattttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgcgtgcgtgtg

Function

NR:

description
PREDICTED: ADAMTS-like protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162864 False 499 TUCP 0.59 3 5944221 5948789
TU162868 False 1055 lncRNA 0.41 2 5902577 6184069
TU162871 False 915 lncRNA 0.37 2 6183025 6184133
XM_043260030.1 True 5227 mRNA 0.54 22 5903040 5948798

Neighbor

gene id symbol gene type direction distance location
celf3b LOC107559029,LOC107713913,LOC107689166 coding downstream 2360 5877048 ~ 5900217 (-)
cers2b cers2b,LOC107688996,LOC107726244,LOC107689165,LOC107558627 coding downstream 29519 5853476 ~ 5873058 (-)
arnt arnt,LOC107688995,LOC107689175,LOC107559034 coding downstream 52363 5834157 ~ 5850214 (-)
mrpl51 mrpl51,LOC107726236,LOC107713917,LOC107559052 coding downstream 79727 5820991 ~ 5822850 (-)
dctn3 dctn3,LOC107713912,LOC107559051,LOC107689179,LOC107726235,LOC107689028,LOC107569444 coding downstream 328777 5571501 ~ 5573800 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding upstream 64786 6248919 ~ 6261997 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding upstream 79371 6263504 ~ 6279577 (-)
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding upstream 377717 6561850 ~ 6566189 (-)
LOC122360792 NA coding upstream 466816 6650949 ~ 6690226 (-)
sox4b sox4,LOC107732138,LOC107722246 coding upstream 1204583 7388716 ~ 7392318 (-)
G110106 NA non-coding downstream 49815 5852432 ~ 5852762 (-)
G110102 NA non-coding downstream 85704 5815560 ~ 5816873 (-)
G110100 LOC107713901,LOC107689161,LOC107559047,LOC107689017 non-coding downstream 88893 5809971 ~ 5813684 (-)
G110093 NA non-coding downstream 94228 5778754 ~ 5808349 (-)
G110090 NA non-coding downstream 125536 5774847 ~ 5777041 (-)
G110199 LOC107726242,LOC107689176,LOC107713897 non-coding upstream 6877 6191010 ~ 6194634 (-)
G110223 NA non-coding upstream 17256 6201389 ~ 6203889 (-)
LOC122360716 NA non-coding upstream 501367 6685500 ~ 6688903 (-)
G110307 NA non-coding upstream 905593 7089726 ~ 7091063 (-)
G110315 NA non-coding upstream 1010405 7194538 ~ 7195316 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other downstream 83959 5817040 ~ 5818618 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other downstream 112043 5782667 ~ 5790534 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other downstream 657019 5232211 ~ 5245558 (-)
G109724 LOC107084717,LOC106511825 other downstream 1807073 4094757 ~ 4095504 (-)
G109600 NA other downstream 2772598 3113842 ~ 3129979 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other upstream 95576 6279709 ~ 6339496 (-)
G110303 NA other upstream 897829 7081962 ~ 7083524 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other upstream 1011357 7195490 ~ 7201381 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other upstream 1257765 7441898 ~ 7618596 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other upstream 1644082 7828215 ~ 7830750 (-)

Expression


Co-expression Network