G110437


Basic Information

Item Value
gene id G110437
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 7792807 ~ 7793387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163180
tcccagactccacctcggcttgtagacccgccggcttcccttaggctcctagctccctcctctctaccgtgctccgtcattccaccagcttcaccaggctccatcgtctctccggctacgccttggtcggtcgtcgaccatccgtcgcctcaggattccactcctccagcttcgcctcgtccctccatccctccggctctgtcaggctcctcccttcccccggctccacctcagtcctctgtcgctctggctccgccgcgtccttctcgtcccccgtctccgcatcagtcgccgaagtctgcggtatcgcctaggacctccagcgccgctgtgtcgccctggctcttcggctctccgcctccgcctccgcctcagtctccccgaccacctgctccgccgccgtcggtcggctccatggggttgatgaccgttacctctccatggctcctccctccgtcggctccaccactgaccatcatggctgggctctggatcgcctcccgccccagactcctcccgtcttcaccctggctcctcccaccgtctcttcctccctggtctcagtgtgctgactccctccc

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0072359 circulatory system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163180 True 581 lncRNA 0.66 1 7792807 7793387

Neighbor

gene id symbol gene type direction distance location
sox4b sox4,LOC107732138,LOC107722246 coding downstream 400489 7388716 ~ 7392318 (-)
LOC122360792 NA coding downstream 1102581 6650949 ~ 6690226 (-)
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding downstream 1226618 6561850 ~ 6566189 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding downstream 1513230 6263504 ~ 6279577 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding downstream 1530810 6248919 ~ 6261997 (-)
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding upstream 135142 7928529 ~ 7951085 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding upstream 184242 7977629 ~ 7984289 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding upstream 212331 8005718 ~ 8053185 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding upstream 274188 8067575 ~ 8074304 (-)
mpp7b LOC107681820 coding upstream 311839 8105226 ~ 8143954 (-)
G110429 NA non-coding downstream 26550 7765887 ~ 7766257 (-)
G110399 NA non-coding downstream 386811 7398058 ~ 7405996 (-)
G110405 NA non-coding downstream 399482 7393066 ~ 7393325 (-)
LOC122360224 NA non-coding downstream 406457 7331148 ~ 7386350 (-)
LOC122360226 NA non-coding downstream 496569 7294182 ~ 7296238 (-)
G110449 LOC107708546,LOC107681784,LOC107691124,LOC107566457 non-coding upstream 56292 7849679 ~ 7904593 (-)
G110452 NA non-coding upstream 90545 7883932 ~ 7901008 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding upstream 94408 7887795 ~ 7889295 (-)
LOC122360975 NA non-coding upstream 165494 7958881 ~ 7960375 (-)
LOC122360778 NA non-coding upstream 195563 7988950 ~ 7992867 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other downstream 174211 7441898 ~ 7618596 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other downstream 591426 7195490 ~ 7201381 (-)
G110303 NA other downstream 709283 7081962 ~ 7083524 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 1453311 6279709 ~ 6339496 (-)
G110215 NA other downstream 1692880 6096675 ~ 6099927 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other upstream 34828 7828215 ~ 7830750 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other upstream 289513 8082900 ~ 8092455 (-)
G110544 NA other upstream 422642 8216029 ~ 8216595 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other upstream 505402 8298789 ~ 8302245 (-)
G110556 NA other upstream 518878 8312265 ~ 8316685 (-)

Expression


Co-expression Network