LOC122360680 (LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991)


Basic Information

Item Value
gene id LOC122360680
gene name LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 7828215 ~ 7830750 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163187
TTTAGGTGCAGGGATCACTTCTCGGTTTATTCCGGGAGTTCTTGTAATTCCGTTAGAATGGAGATCGACTCCGAGTCCCGCGCCGACAGCACCAGCACCATTACTGACAGAACCAGGAAGAGCTCAAATATAGAGAGTTTAGGTTTGTCTCACTCCAAGCTGGCTTACGATGGAAACTTTATTCGCTCTGCTTCTGGCGCGTTTATGGCTGGAGAAATCGTGTTTGGGCTTCTGGTGTGGACTCTGATTGGTGGGACAGAGTACCTCCATGTTCCTGCACTGGTATGGGTAATGTTTGTGTCAGTGTTTTATTGGGCGCTTACTGTCATTCTCTTCCTCATATACCTGACTATGGCCCACACCAGGATTCCCCAG
>XM_043261494.1
GGCTAACCCTTCACCATAGTAGGTTTCCTTTAGTTTAGGTGCAGGGATCACTTCTCGGTTTATTCCGGGAGTTCTTGTAATTCCGTTAGAATGGAGATCGACTCCGAGTCCCGCGCCGACAGCACCAGCACCATTACTGACAGAACCAGGAAGAGCTCAAATATAGAGAGTTTAGGTTTGTCTCACTCCAAGCTGGCTTACGATGGAAACTTTATTCGCTCTGCTTCTGGCGCGTTTATGGCTGGAGAAATCGTGTTTGGGCTTCTGGTGTGGACTCTGATTGGTGGGACAGAGTACCTCCATGTTCCTGCACTGGTATGGGTAATGTTTGTGTCAGTGTTTTATTGGGCGCTTACTGTCATTCTCTTCCTCATATACCTGACTATGGCCCACACCAGGATTCCCCAGATCCCTGTTAATCCGCAGGGAATATGTTTTAATGGCAGTGCCTCTGTATTGTACCTGGCAGCGGCTGTGATTTGTGGCATATCTTTGAATGTGGCCATTAAGGGGCGCTACTACTTCATCAGCTGGGTTGCATCGACGATATTTGCCTCACTGGCTATGGTGTGTTATGCAGGAAACACGGTTGTGAATTTCAAATCGTGGAGAACAAAAAGTGAAGAGACATaaggaaatgtttttagtttgtttttagtCTGTTCGTTTTTACTATCCCTGGGGGATCATttctgcaaattaaaataatca

Function

NR:

description
PREDICTED: CKLF-like MARVEL transmembrane domain-containing protein 8

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163187 False 375 TUCP 0.49 2 7828820 7830717
XM_043261494.1 True 711 mRNA 0.45 4 7828215 7830750

Neighbor

gene id symbol gene type direction distance location
sox4b sox4,LOC107732138,LOC107722246 coding downstream 435897 7388716 ~ 7392318 (-)
LOC122360792 NA coding downstream 1137989 6650949 ~ 6690226 (-)
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding downstream 1262026 6561850 ~ 6566189 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding downstream 1548638 6263504 ~ 6279577 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding downstream 1566218 6248919 ~ 6261997 (-)
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding upstream 97779 7928529 ~ 7951085 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding upstream 146879 7977629 ~ 7984289 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding upstream 174968 8005718 ~ 8053185 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding upstream 236825 8067575 ~ 8074304 (-)
mpp7b LOC107681820 coding upstream 274476 8105226 ~ 8143954 (-)
G110437 NA non-coding downstream 34828 7792807 ~ 7793387 (-)
G110429 NA non-coding downstream 61958 7765887 ~ 7766257 (-)
G110399 NA non-coding downstream 422219 7398058 ~ 7405996 (-)
G110405 NA non-coding downstream 434890 7393066 ~ 7393325 (-)
LOC122360224 NA non-coding downstream 441865 7331148 ~ 7386350 (-)
G110449 LOC107708546,LOC107681784,LOC107691124,LOC107566457 non-coding upstream 18929 7849679 ~ 7904593 (-)
G110452 NA non-coding upstream 53182 7883932 ~ 7901008 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding upstream 57045 7887795 ~ 7889295 (-)
LOC122360975 NA non-coding upstream 128131 7958881 ~ 7960375 (-)
LOC122360778 NA non-coding upstream 158200 7988950 ~ 7992867 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other downstream 209619 7441898 ~ 7618596 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other downstream 626834 7195490 ~ 7201381 (-)
G110303 NA other downstream 744691 7081962 ~ 7083524 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 1488719 6279709 ~ 6339496 (-)
G110215 NA other downstream 1728288 6096675 ~ 6099927 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other upstream 252150 8082900 ~ 8092455 (-)
G110544 NA other upstream 385279 8216029 ~ 8216595 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other upstream 468039 8298789 ~ 8302245 (-)
G110556 NA other upstream 481515 8312265 ~ 8316685 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 802600 8633350 ~ 8636222 (-)

Expression


Co-expression Network