LOC122360975


Basic Information

Item Value
gene id LOC122360975
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 7958881 ~ 7960375 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163265
GTGTCCTGCTGCTGAGGGTCACGGCCCAGCTTACGAACACAAACTTATCTTCCGTACATCTGCCGGGCCGCCTGCGCAGTCAGTCTGTCTCCACTGCAGGCTGCGCTCTCTTTCCTGGTTGGGGGATGCTTTGGTcgaggagagcgacagagagagGGCCAGCGGGAAGGGGGGACAGAGTGGGAAACCGAGGATCTGGACCCTGCCAAGACGCTGAGCTACATGGAAAACACGAGCTGCCTCCAGGATGGAGATGACCTTTGAGTGACCAATGGTGAAGCTCAACCCGGGCCCTTTCGCAGAGCAAGGGAATGCTGGCTGCGTCTGCCCAGGAGAAAATGACAACTTCATTAGAAGGGCTTGGATAGAGGAGAG
>XR_006252846.1
AAGAGCTACAGCCATGAGAAACTGCTGATGGAGTGTTTTCGAAAAGTACTCCGGCGTCACTGTCACACGTCTCCATCCATTAGTCCGGCAGGGAGAGGGGAAATGATGCTGGCCATCATTGTGTGTCGGCAGAGCCTGAGAGAGATTGCGGGGTCGGAGGAGGTGTTAGGGAGCCTCGCGGTGCTGCCGTAGAGGAAAGCGTCGGCTCCACGGGGCTTCCCTCCTCCCTCCCCGCCGGGCCGTGATAGGCTGGATGGCAGGAGGGCCGCAGTTGTGGGGGAGGGTATAGCGGCTGTGCCGGGCTCCCTTCTGCCCTCTCGCTGACAGGATCTGGTCAGTGTCCTGCTGCTGAGGGTCACGGCCCAGCTTACGAACACAAACTTATCTTCCGTACATCTGCCGGGCCGCCTGCGCAGTCAGTCTGTCTCCACTGCAGGCTGCGCTCTCTTTCCTGGTTGGGGGATGCTTTGGTcgaggagagcgacagagagagGGCCAGCGGGAAGGGGGGACAGAGTGGGAAACCGAGGATCTGGACCCTGCCAAGACGCTGAGCTACATGGAAAACACGAGCTGCCTCCAGGATGGAGATGACCTTTGAGTGACCAATGGTGAAGCTCAACCCGGGCCCTTTCGCAGAGCAAGGGAATGCTGGCTGCGTCTGCCCAGGAGAAAATGACAACTTCATTAGAAGGGCTTGGATAGAGGAGAGTGGGAAAACAAATGACTGCGAGCGGTGTTGATGGAGTGCAGTGAGGCTAACTCTGAGGAGTTCTACCTGCCAAAACCTTGTCTGCCTAACCTTAACCCAGACGAGAGAATTAGTAGATGATGTATGGGTGAGAGCGTGCTATCTGATGGGAGGAGCGCTTATGAGAGGCATGATTTGGGTCCCTTCTTTTTTAGGAATCAGTTTTGGTTCAAAGTGCTGGTTTTTCAGTAAGCCTTTGGCACATGACACATGTTCATTGTTTTTAtccatgtttttaatttaaaaaaagaatacatttctattaaattttctgttaaattattattaaaaacggttgtgaatgactgaatgaaggatatatatatatatatttatttattttgtaaaagaaTTTTAAGAAAAGACATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163265 False 375 lncRNA 0.58 3 7959291 7960038
XR_006252846.1 True 1122 lncRNA 0.51 3 7958881 7960375

Neighbor

gene id symbol gene type direction distance location
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding downstream 7796 7928529 ~ 7951085 (-)
sox4b sox4,LOC107732138,LOC107722246 coding downstream 566563 7388716 ~ 7392318 (-)
LOC122360792 NA coding downstream 1268655 6650949 ~ 6690226 (-)
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding downstream 1392692 6561850 ~ 6566189 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding downstream 1679304 6263504 ~ 6279577 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding upstream 17254 7977629 ~ 7984289 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding upstream 45343 8005718 ~ 8053185 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding upstream 107200 8067575 ~ 8074304 (-)
mpp7b LOC107681820 coding upstream 144851 8105226 ~ 8143954 (-)
adipoqb adipoqb,adipoq,LOC107681756,LOC107755695,LOC107566714,LOC100653481 coding upstream 234726 8195101 ~ 8200339 (-)
G110449 LOC107708546,LOC107681784,LOC107691124,LOC107566457 non-coding downstream 54288 7849679 ~ 7904593 (-)
G110452 NA non-coding downstream 57873 7883932 ~ 7901008 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding downstream 69586 7887795 ~ 7889295 (-)
G110437 NA non-coding downstream 165494 7792807 ~ 7793387 (-)
G110429 NA non-coding downstream 192624 7765887 ~ 7766257 (-)
LOC122360778 NA non-coding upstream 28575 7988950 ~ 7992867 (-)
G110546 NA non-coding upstream 274533 8234908 ~ 8235793 (-)
G110548 NA non-coding upstream 277383 8237758 ~ 8239176 (-)
G110753 NA non-coding upstream 587407 8547782 ~ 8551552 (-)
G110773 NA non-coding upstream 629523 8589898 ~ 8590634 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 128131 7828215 ~ 7830750 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other downstream 340285 7441898 ~ 7618596 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other downstream 757500 7195490 ~ 7201381 (-)
G110303 NA other downstream 875357 7081962 ~ 7083524 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 1619385 6279709 ~ 6339496 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other upstream 122525 8082900 ~ 8092455 (-)
G110544 NA other upstream 255654 8216029 ~ 8216595 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other upstream 338414 8298789 ~ 8302245 (-)
G110556 NA other upstream 351890 8312265 ~ 8316685 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 672975 8633350 ~ 8636222 (-)

Expression


Co-expression Network